github-agent 2.4.5__tar.gz → 2.4.6__tar.gz

{github_agent-2.4.5 → github_agent-2.4.6}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: github-agent
-Version: 2.4.5
+Version: 2.4.6
 Summary: GitHub Agent for MCP
 Author-email: Project Maintainers <maintainers@users.noreply.github.com>
 License: MIT
@@ -44,7 +44,7 @@ Dynamic: license-file
 ![PyPI - Wheel](https://img.shields.io/pypi/wheel/github-agent)
 ![PyPI - Implementation](https://img.shields.io/pypi/implementation/github-agent)
 
-*Version: 2.4.5*
+*Version: 2.4.6*
 
 > **Documentation** — Installation, deployment, and usage across the MCP, API, and
 > [official documentation](https://knuckles-team.github.io/github-agent/).

{github_agent-2.4.5 → github_agent-2.4.6}/README.md

@@ -20,7 +20,7 @@
 ![PyPI - Wheel](https://img.shields.io/pypi/wheel/github-agent)
 ![PyPI - Implementation](https://img.shields.io/pypi/implementation/github-agent)
 
-*Version: 2.4.5*
+*Version: 2.4.6*
 
 > **Documentation** — Installation, deployment, and usage across the MCP, API, and
 > [official documentation](https://knuckles-team.github.io/github-agent/).

github_agent-2.4.6/github_agent/__init__.py

@@ -0,0 +1 @@
+__version__ = "2.4.6"

{github_agent-2.4.5 → github_agent-2.4.6}/github_agent/mcp_server.py

@@ -39,7 +39,7 @@ from github_agent.auth import (
 )
 from github_agent.github_response_models import PagesAlreadyEnabled, PagesNotEnabled
 
-__version__ = "2.4.5"
+__version__ = "2.4.6"
 logger = get_logger("GithubMCPServer")
 logger.setLevel(logging.INFO)
 

{github_agent-2.4.5 → github_agent-2.4.6}/github_agent/ontology/github.ttl

@@ -18,6 +18,7 @@
     rdfs:comment "A GitHub organization that owns repositories and members (github_orgs)." .
 
 :Repository a owl:Class ;
+    rdfs:subClassOf :SoftwareProject ;
     rdfs:label "Repository" ;
     rdfs:comment "A GitHub repository / codebase (github_repos)." .
 
@@ -26,6 +27,7 @@
     rdfs:comment "A proposed change under review, from a head to a base branch (github_pulls)." .
 
 :Issue a owl:Class ;
+    rdfs:subClassOf :WorkItem ;
     rdfs:label "Issue" ;
     rdfs:comment "A tracked work item, bug, or discussion in a repository (github_issues)." .
 
@@ -46,6 +48,7 @@
     rdfs:comment "A GitHub Actions CI/CD workflow definition (github_actions)." .
 
 :WorkflowRun a owl:Class ;
+    rdfs:subClassOf :PipelineRun ;
     rdfs:label "Workflow Run" ;
     rdfs:comment "A single execution of a GitHub Actions workflow for a ref/commit (github_actions)." .
 

{github_agent-2.4.5 → github_agent-2.4.6}/github_agent.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: github-agent
-Version: 2.4.5
+Version: 2.4.6
 Summary: GitHub Agent for MCP
 Author-email: Project Maintainers <maintainers@users.noreply.github.com>
 License: MIT
@@ -44,7 +44,7 @@ Dynamic: license-file
 ![PyPI - Wheel](https://img.shields.io/pypi/wheel/github-agent)
 ![PyPI - Implementation](https://img.shields.io/pypi/implementation/github-agent)
 
-*Version: 2.4.5*
+*Version: 2.4.6*
 
 > **Documentation** — Installation, deployment, and usage across the MCP, API, and
 > [official documentation](https://knuckles-team.github.io/github-agent/).

{github_agent-2.4.5 → github_agent-2.4.6}/github_agent.egg-info/SOURCES.txt

@@ -121,6 +121,7 @@ tests/test_kg_ingest.py
 tests/test_mcp_coverage.py
 tests/test_mcp_package_dispatch.py
 tests/test_model_fields.py
+tests/test_ontology_parent_link.py
 tests/test_org_crud.py
 tests/test_pages.py
 tests/test_repo_secrets_characterization.py

{github_agent-2.4.5 → github_agent-2.4.6}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "github-agent"
-version = "2.4.5"
+version = "2.4.6"
 readme = "README.md"
 description = "GitHub Agent for MCP"
 requires-python = ">=3.12"

github_agent-2.4.6/tests/test_ontology_parent_link.py

@@ -0,0 +1,114 @@
+"""Every class of the packaged ontology reaches an epistemic-graph parent class (CONN-GITHUB-AGENT-CONNECTOR-CONTENT-R002)."""
+
+from __future__ import annotations
+
+import re
+from pathlib import Path
+
+import pytest
+
+pytestmark = pytest.mark.spec("CONN-GITHUB-AGENT-CONNECTOR-CONTENT-R002")
+
+PARENT_IRI = "http://knuckles.team/kg"
+ONTOLOGIES = sorted(
+    (Path(__file__).resolve().parents[1] / "github_agent" / "ontology").glob("*.ttl")
+)
+OWL = "http://www.w3.org/2002/07/owl#"
+RDF_TYPE = "http://www.w3.org/1999/02/22-rdf-syntax-ns#type"
+SUBCLASS = "http://www.w3.org/2000/01/rdf-schema#subClassOf"
+# Parent classes of the epistemic-graph ontology that this connector links to or redeclares.
+PARENT_CLASSES = frozenset(
+    (
+        "http://knuckles.team/kg#Commit",
+        "http://knuckles.team/kg#Document",
+        "http://knuckles.team/kg#Organization",
+        "http://knuckles.team/kg#Person",
+        "http://knuckles.team/kg#PipelineRun",
+        "http://knuckles.team/kg#PullRequest",
+        "http://knuckles.team/kg#SoftwareProject",
+        "http://knuckles.team/kg#WorkItem",
+        "http://knuckles.team/kg#Workflow",
+    )
+)
+# Classes for which the parent ontology has no fitting class yet. Each is a candidate for a new
+# parent class (see the orphan mapping report); a class leaves this set when it gains a parent.
+PENDING_NEW_PARENT: frozenset[str] = frozenset(
+    (
+        "http://knuckles.team/kg#Branch",
+        "http://knuckles.team/kg#CheckRun",
+        "http://knuckles.team/kg#Release",
+    )
+)
+
+_STRING = re.compile(r'"""(?:.|\n)*?"""|"(?:[^"\\\n]|\\.)*"')
+_IRI = re.compile(r"<([^<>\s]*)>")
+_PREFIX = re.compile(r"(?im)^\s*@?prefix\s+([A-Za-z][\w.-]*)?:\s+\x00(\d+)\s*\.?")
+_END = re.compile(r"\s\.(?=\s|$)|(?<=[\]>)\w\"'])\.(?=\s|$)")
+
+
+def _triples(text: str) -> list[tuple[str, str, str]]:
+    """Subject, predicate and object of a Turtle file; names are expanded, literals dropped."""
+    iris: list[str] = []
+
+    def keep(match: re.Match[str]) -> str:
+        iris.append(match.group(1))
+        return f" \x00{len(iris)} "
+
+    body = re.sub(r"(?m)#[^\n]*$", "", _IRI.sub(keep, _STRING.sub(' "" ', text)))
+    prefixes = {
+        m.group(1) or "": iris[int(m.group(2)) - 1] for m in _PREFIX.finditer(body)
+    }
+    body = re.sub(r"\[[^\[\]]*\]", " _:b ", _PREFIX.sub("", body))
+
+    def expand(token: str) -> str:
+        if token.startswith("\x00"):
+            return iris[int(token[1:]) - 1]
+        prefix, sep, local = token.partition(":")
+        return (
+            prefixes[prefix] + local
+            if sep and prefix in prefixes
+            else RDF_TYPE
+            if token == "a"
+            else token
+        )
+
+    triples: list[tuple[str, str, str]] = []
+    for statement in _END.split(body):
+        tokens = statement.replace(";", " ; ").replace(",", " , ").split()
+        subject, predicate, fresh = "", "", True
+        for index, token in enumerate(tokens):
+            if index == 0:
+                subject = expand(token)
+            elif token == ";":
+                fresh = True
+            elif token != ",":
+                if fresh:
+                    predicate, fresh = expand(token), False
+                else:
+                    triples.append((subject, predicate, expand(token)))
+    return triples
+
+
+def _orphans(triples: list[tuple[str, str, str]]) -> set[str]:
+    declared = {s for s, p, o in triples if p == RDF_TYPE and o == OWL + "Class"}
+    linked: set[str] = set()
+    changed = True
+    while changed:
+        changed = False
+        for cls in declared - linked - PARENT_CLASSES:
+            ups = {o for s, p, o in triples if s == cls and p == SUBCLASS}
+            if ups & (PARENT_CLASSES | linked):
+                linked.add(cls)
+                changed = True
+    return declared - linked - PARENT_CLASSES
+
+
+@pytest.mark.parametrize("path", ONTOLOGIES, ids=lambda p: p.name)
+def test_ontology_joins_the_parent_graph(path: Path) -> None:
+    triples = _triples(path.read_text(encoding="utf-8"))
+    declared = {s for s, p, o in triples if p == RDF_TYPE and o == OWL + "Class"}
+    if not declared:
+        pytest.skip("declares no classes")
+    imports = {o for s, p, o in triples if p == OWL + "imports"}
+    assert any(i == PARENT_IRI or i.startswith(PARENT_IRI + "/") for i in imports)
+    assert _orphans(triples) == PENDING_NEW_PARENT & declared

github_agent-2.4.5/github_agent/__init__.py

@@ -1 +0,0 @@
-__version__ = "2.4.5"