gismap 0.4.0__tar.gz → 0.4.1__tar.gz

{gismap-0.4.0 → gismap-0.4.1}/.github/ISSUE_TEMPLATE.md

@@ -1,4 +1,4 @@
-* Generic Information Search: Mapping and Analysis of Publications version:
+* GisMap version:
 * Python version:
 * Operating System:
 

{gismap-0.4.0 → gismap-0.4.1}/.github/workflows/build.yml

@@ -12,7 +12,7 @@ on:
   schedule:
     - cron: '30 5 1,15 * *'
 env:
-  NUMBA_DISABLE_JIT: 1
+  NUMBA_DISABLE_JIT: 0
 
 jobs:
   build:
@@ -20,7 +20,7 @@ jobs:
     timeout-minutes: 30
     strategy:
       matrix:
-        python-version: ["3.10", "3.11", "3.12", "3.13"]
+        python-version: ["3.11", "3.12", "3.13", "3.14"]
     steps:
 
     - name: Checkout

{gismap-0.4.0 → gismap-0.4.1}/.github/workflows/docs.yml

@@ -39,7 +39,6 @@ jobs:
       - name: Build Sphinx documentation
         run: |
           uv sync --all-extras
-          uv run python -m gismap.build
           uv run sphinx-build -a -E -b html docs build
 
       - name: Deploy Sphinx documentation on Github Pages

{gismap-0.4.0 → gismap-0.4.1}/.github/workflows/ldb-build.yml

@@ -33,14 +33,14 @@ jobs:
       - name: Build LDB database
         run: |
           echo "Building LDB database from DBLP TTL..."
-          uv run python -m gismap.build
+          uv run python -m gismap.build --no-search
           echo "Build complete."
 
       - name: Locate and verify database
         id: locate-db
         run: |
           # Find database in platformdirs location
-          DB_PATH=$(uv run python -c "from gismap.sources.ldb import LDB_PATH; print(LDB_PATH)")
+          DB_PATH=$(uv run python -c "from gismap.sources.ldb import LDB_PARAMETERS; print(LDB_PARAMETERS.io.destination)")
           echo "Database path: $DB_PATH"
 
           if [ ! -f "$DB_PATH" ]; then

{gismap-0.4.0 → gismap-0.4.1}/.github/workflows/release.yml

@@ -56,13 +56,13 @@ jobs:
       - name: Build LDB database
         run: |
           echo "Building LDB database from DBLP TTL..."
-          uv run python -m gismap.build
+          uv run python -m gismap.build --no-search
           echo "Build complete."
 
       - name: Locate database
         id: locate-db
         run: |
-          DB_PATH=$(uv run python -c "from gismap.sources.ldb import LDB_PATH; print(LDB_PATH)")
+          DB_PATH=$(uv run python -c "from gismap.sources.ldb import LDB_PARAMETERS; print(LDB_PARAMETERS.io.destination)")
           echo "Database path: $DB_PATH"
           echo "db_path=$DB_PATH" >> $GITHUB_OUTPUT
 

{gismap-0.4.0 → gismap-0.4.1}/.run/All tests.run.xml

@@ -4,11 +4,8 @@
     <option name="ENV_FILES" value="" />
     <option name="INTERPRETER_OPTIONS" value="" />
     <option name="PARENT_ENVS" value="true" />
-    <envs>
-      <env name="NUMBA_DISABLE_JIT" value="1" />
-    </envs>
     <option name="SDK_HOME" value="" />
-    <option name="SDK_NAME" value="Python 3.12 (gismap)" />
+    <option name="SDK_NAME" value="uv (gismap)" />
     <option name="WORKING_DIRECTORY" value="" />
     <option name="IS_MODULE_SDK" value="false" />
     <option name="ADD_CONTENT_ROOTS" value="true" />
@@ -21,4 +18,4 @@
     <option name="_new_targetType" value="&quot;PATH&quot;" />
     <method v="2" />
   </configuration>
-</component>
+</component>

{gismap-0.4.0 → gismap-0.4.1}/CONTRIBUTING.md

@@ -29,8 +29,8 @@ and "help wanted" is open to whoever wants to implement it.
 
 ### Write Documentation
 
-Generic Information Search: Mapping and Analysis of Publications could always use more documentation, whether as part of the
-official Generic Information Search: Mapping and Analysis of Publications docs, in docstrings, or even on the web in blog posts,
+GisMap could always use more documentation, whether as part of the
+official GisMap docs, in docstrings, or even on the web in blog posts,
 articles, and such.
 
 ### Submit Feedback
@@ -50,7 +50,7 @@ Ready to contribute? Here's how to set up `gismap` for local development.
 
 1. Fork the `gismap` repo on GitHub.
 
-2. Clone your fork locally::
+2. Clone your fork locally:
     ```console
     $ git clone git@github.com:your_name_here/gismap.git
     ```
@@ -61,7 +61,7 @@ Ready to contribute? Here's how to set up `gismap` for local development.
     $ uv sync --all-extras
     ```
 
-4. Create a branch for local development::
+4. Create a branch for local development:
     ```console
     $ git checkout -b name-of-your-bugfix-or-feature
     ```
@@ -73,7 +73,7 @@ Ready to contribute? Here's how to set up `gismap` for local development.
     $ uv run pytest
     ```
 
-6. Commit your changes and push your branch to GitHub::
+6. Commit your changes and push your branch to GitHub:
     ```bash
     $ git add .
     $ git commit -m "Your detailed description of your changes."

{gismap-0.4.0 → gismap-0.4.1}/HISTORY.md

@@ -2,13 +2,20 @@
 
 ## Pipeline
 
-- anHALyze: tools to spot HAL issues (bad author metada, DBLP comparison, widget)
+- anHALyze: tools to spot HAL issues (bad author metadata, DBLP comparison, widget)
 - EgoConf: find your conferences journals
 - Easier access to graph customization
 - Additional graph option (e.g. time filtering and coloring, default group checks...)
 - Custom CSS (e.g. transparent background)
 - Gismo integration
 
+## 0.4.1 (2026-02-02): Python 3.14 support
+
+- Add Python 3.14 compatibility (requires gismo>=0.5.4).
+- Drop Python 3.10 support (now requires 3.11+).
+- LDB search engine fine-tuned.
+- Various typo fixes.
+
 ## 0.4.0 (2026-01-27): Local DB
 
 New DB: LDB (Local DB). All the strengths of DBLP, None of its weaknesses.
@@ -56,7 +63,7 @@ Also, Lamsade added to the gallery.
 - New lab structure: EgoMap shows the people that revolves around you!
 - New lab method: expansion, which adds *moons* (neighbor researchers).
 - Add filters when building authors and publications.
-- Physic engine changed fo better visualization.
+- Physic engine changed for better visualization.
 - Multi-source handling fine-tuned.
 - Better display (size and theme).
 
@@ -65,5 +72,5 @@ Also, Lamsade added to the gallery.
 
 - First release on PyPI.
 - Online DBLP and HAL DB implemented.
-- Lab stuctures implemented.
+- Lab structures implemented.
 - Early version of collaboration graph available.

{gismap-0.4.0 → gismap-0.4.1}/PKG-INFO

@@ -1,26 +1,26 @@
 Metadata-Version: 2.4
 Name: gismap
-Version: 0.4.0
-Summary: GisMap leverages DBLP and HAL databases to provide cartography tools for you and your lab.
+Version: 0.4.1
+Summary: GisMap: for researchers, by researchers. Research cartography tools leveraging DBLP and HAL.
 Project-URL: Repository, https://github.com/balouf/gismap
 Project-URL: Documentation, https://balouf.github.io/gismap
 Author-email: Fabien Mathieu <fabien.mathieu@normalesup.org>
 Maintainer-email: Fabien Mathieu <fabien.mathieu@normalesup.org>
 License-Expression: MIT
 License-File: AUTHORS.md
-Requires-Python: >=3.10
-Requires-Dist: beautifulsoup4>=4.14.2
-Requires-Dist: bof>=0.3.5
+Requires-Python: <3.15,>=3.11
+Requires-Dist: beautifulsoup4>=4.14.3
+Requires-Dist: bof>=0.4.2
 Requires-Dist: distinctipy>=1.3.4
 Requires-Dist: domonic>=0.9.13
-Requires-Dist: gismo>=0.5.2
+Requires-Dist: gismo>=0.5.4
 Requires-Dist: ipykernel>=6.30.1
 Requires-Dist: ipywidgets>=8.1.8
-Requires-Dist: platformdirs>=4.5.0
+Requires-Dist: platformdirs>=4.5.1
 Requires-Dist: tqdm>=4.67.1
 Description-Content-Type: text/markdown
 
-# Generic Information Search: Mapping and Analysis of Publications
+# GisMap: for researchers, by researchers
 
 
 [![PyPI Status](https://img.shields.io/pypi/v/gismap.svg)](https://pypi.python.org/pypi/gismap)
@@ -30,7 +30,7 @@ Description-Content-Type: text/markdown
 [![License: MIT](https://img.shields.io/badge/license-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
 [![Code Coverage](https://codecov.io/gh/balouf/gismap/branch/main/graphs/badge.svg)](https://codecov.io/gh/balouf/gismap/tree/main)
 
-GisMap leverages DBLP and HAL databases to provide cartography tools for you and your lab.
+GisMap (Generic Information Search: Mapping and Analysis of Publications) leverages DBLP and HAL databases to provide cartography tools for you and your lab.
 
 - Free software: MIT
 - Documentation: <https://balouf.github.io/gismap/>.
@@ -41,6 +41,7 @@ GisMap leverages DBLP and HAL databases to provide cartography tools for you and
 - Can be used by all researchers in Computer Science (DBLP endpoint) or based in France (HAL endpoint).
 - Aggregate publications from multiple databases, including multiple author keys inside the same database.
 - Automatically keeps track of a Lab/Department members and publications.
+- DBLP database can be used locally (LDB endpoint) to improve speed and reliability.
 - Builds interactive collaboration graphs.
 
 ## Test GisMap online!
@@ -54,6 +55,7 @@ For example:
 - [Tutorial: Making EgoMaps](https://mybinder.org/v2/gh/balouf/gismap/HEAD?urlpath=%2Fdoc%2Ftree%2Fdocs%2Ftutorials%2Fegomap.ipynb)
 - [Jupyter Lab instance with GisMap installed](https://mybinder.org/v2/gh/balouf/gismap/HEAD)
 
+**WARNING**: don't use LDB on `binder`, which does not provide enough memory yet. Only HAL and legacy DBLP work on binder.
 
 ## Quickstart
 

{gismap-0.4.0 → gismap-0.4.1}/README.md

@@ -1,4 +1,4 @@
-# Generic Information Search: Mapping and Analysis of Publications
+# GisMap: for researchers, by researchers
 
 
 [![PyPI Status](https://img.shields.io/pypi/v/gismap.svg)](https://pypi.python.org/pypi/gismap)
@@ -8,7 +8,7 @@
 [![License: MIT](https://img.shields.io/badge/license-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
 [![Code Coverage](https://codecov.io/gh/balouf/gismap/branch/main/graphs/badge.svg)](https://codecov.io/gh/balouf/gismap/tree/main)
 
-GisMap leverages DBLP and HAL databases to provide cartography tools for you and your lab.
+GisMap (Generic Information Search: Mapping and Analysis of Publications) leverages DBLP and HAL databases to provide cartography tools for you and your lab.
 
 - Free software: MIT
 - Documentation: <https://balouf.github.io/gismap/>.
@@ -19,6 +19,7 @@ GisMap leverages DBLP and HAL databases to provide cartography tools for you and
 - Can be used by all researchers in Computer Science (DBLP endpoint) or based in France (HAL endpoint).
 - Aggregate publications from multiple databases, including multiple author keys inside the same database.
 - Automatically keeps track of a Lab/Department members and publications.
+- DBLP database can be used locally (LDB endpoint) to improve speed and reliability.
 - Builds interactive collaboration graphs.
 
 ## Test GisMap online!
@@ -32,6 +33,7 @@ For example:
 - [Tutorial: Making EgoMaps](https://mybinder.org/v2/gh/balouf/gismap/HEAD?urlpath=%2Fdoc%2Ftree%2Fdocs%2Ftutorials%2Fegomap.ipynb)
 - [Jupyter Lab instance with GisMap installed](https://mybinder.org/v2/gh/balouf/gismap/HEAD)
 
+**WARNING**: don't use LDB on `binder`, which does not provide enough memory yet. Only HAL and legacy DBLP work on binder.
 
 ## Quickstart
 

{gismap-0.4.0 → gismap-0.4.1}/binder/interactive.ipynb

@@ -31,8 +31,10 @@
     "- Choose your DB:\n",
     "  - HAL for French researchers (fast DB);\n",
     "  - DBLP for CS researchers (slow DB);\n",
+    "  - Note that MyBinder does not have enough memory for using the current version of LDB.\n",
     "- The size slider will complete your map with *moons* if necessary and feasible.\n",
     "\n",
+    "\n",
     "You can save the result!\n",
     "\n",
     "Just execute the cell above to proceed."

gismap-0.4.1/binder/requirements.txt

@@ -0,0 +1 @@
+git+https://github.com/balouf/gismap.git@main#egg=gismap

{gismap-0.4.0 → gismap-0.4.1}/citation.cff

@@ -1,6 +1,6 @@
 
 cff-version: 1.2.0
-title: Generic Information Search: Mapping and Analysis of Publications
+title: GisMap
 message: >-
   If you use this software, please cite it using the
   metadata from this file.
@@ -11,5 +11,5 @@ authors:
     email: fabien.mathieu@normalesup.org
 repository-code: "https://github.com/balouf/gismap/"
 url: "https://balouf.github.io/gismap/"
-abstract: GISMAP leverages DBLP and HAL databases to provide cartography tools for you and your lab.
+abstract: "GisMap: for researchers, by researchers. Generic Information Search: Mapping and Analysis of Publications. Leverages DBLP and HAL databases to provide research cartography tools."
 license: MIT

{gismap-0.4.0 → gismap-0.4.1}/docs/conf.py

@@ -87,7 +87,7 @@ source_suffix = [".rst", ".md"]
 master_doc = "index"
 
 # General information about the project.
-project = "Generic Information Search: Mapping and Analysis of Publications"
+project = "GisMap"
 copyright = "2025, Fabien Mathieu"
 author = "Fabien Mathieu"
 

{gismap-0.4.0 → gismap-0.4.1}/docs/faq.ipynb

@@ -54,7 +54,7 @@
    "source": [
     "The internal structure of GisMap interleaves simple concepts, like author, DB, publication, and lab.\n",
     "\n",
-    "- An `Author` is a reseacher that has published papers. Internally, it's just a name.\n",
+    "- An `Author` is a researcher that has published papers. Internally, it's just a name.\n",
     "- A `DB` is where the information comes from, like the [HAL portal](https://hal.science/) or\n",
     "the [The DBLP Computer Science Bibliography](https://dblp.org/).\n",
     "- A DB should provide a method to search authors and retrieve author's publications.\n",
@@ -181,12 +181,12 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "from gismap import HALAuthor, DBLPAuthor\n",
+    "from gismap import HALAuthor, LDBAuthor\n",
     "\n",
     "fd = LabAuthor.from_sources(\n",
     "    [\n",
     "        HALAuthor(name=\"François Durand\", key=\"fradurand\"),\n",
-    "        DBLPAuthor(name=\"François Durand\", key=\"38/11269\"),\n",
+    "        LDBAuthor(name=\"François Durand\", key=\"38/11269\"),\n",
     "    ]\n",
     ")\n",
     "fd.sources"
@@ -207,7 +207,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "fd = LabAuthor(\"François Durand (hal: fradurand, dblp: 38/11269)\")\n",
+    "fd = LabAuthor(\"François Durand (hal: fradurand, ldb: 38/11269)\")\n",
     "fd.sources"
    ]
   },
@@ -220,7 +220,7 @@
     "\n",
     "- The parenthesis notation can also be used to specify other metadata (URL, image, group) with the same \"key: value, ...\"format\n",
     "- For proper parsing, a name should contain no parenthesis, a key should not contain \",\" or \":\", and a value should not contain \",\"\n",
-    "- You can enter mutiple keys for the same DB, e.g. \"My name (hal: key1, hal: key2)\"\n",
+    "- You can enter multiple keys for the same DB, e.g. \"My name (hal: key1, hal: key2)\"\n",
     "\n",
     ":::"
    ]
@@ -314,7 +314,7 @@
     "  - The title should have at least 2 words.\n",
     "  - The title should not contain *taboo* words like *Editorial*, *Foreword*, *Brief Announcement*, *Preface*.\n",
     "\n",
-    "Feel free to change the existing filters or add new oned to adapt to your need.\n",
+    "Feel free to change the existing filters or add new ones to adapt to your needs.\n",
     "\n",
     "For example, to build the EgoMap of François Durand, taking account some specificities:"
    ]
@@ -491,11 +491,11 @@
    "id": "45",
    "metadata": {},
    "source": [
-    "| Database   | Pros                                 | Cons                                                            |\n",
-    "|------------|--------------------------------------|-----------------------------------------------------------------|\n",
-    "| HAL        | Fast; Rich metadata (e.g. abstracts) | France-based research only; Errors and gaps exist               |\n",
-    "| DBLP       | Highly accurate; Unified venue names | Computer Science only; Very slow                                |\n",
-    "| Local DBLP | Ultra-fast                         | Not integrated yet! All DBLP cons + No unique search keys |"
+    "| Database | Pros                                        | Cons                                              |\n",
+    "|----------|---------------------------------------------|---------------------------------------------------|\n",
+    "| HAL      | Fast; Rich metadata (e.g. abstracts)        | France-based research only; Errors and gaps exist |\n",
+    "| DBLP     | Highly accurate; Unified venue names        | Computer Science only; Very slow                  |\n",
+    "| LDB      | Fast; Highly accurate; Unified venue names  | Computer Science only; 3GB RAM recommended        |"
    ]
   },
   {

{gismap-0.4.0 → gismap-0.4.1}/docs/presentation/installation.md

@@ -2,19 +2,19 @@
 
 ## Stable release
 
-To install Generic Information Search: Mapping and Analysis of Publications, run this command in your terminal:
+To install GisMap, run this command in your terminal:
 
 ```console
 $ pip install gismap
 ```
 
-This is the preferred method to install Generic Information Search: Mapping and Analysis of Publications, as it will always install the most recent stable release.
+This is the preferred method to install GisMap, as it will always install the most recent stable release.
 
 If you don't have [pip] installed, this [Python installation guide] can guide
 you through the process.
 
 ````{note}
-If you want to use Generic Information Search: Mapping and Analysis of Publications as a dependency in a UV-managed project, add it with
+If you want to use GisMap as a dependency in a UV-managed project, add it with
 ```console
 $ uv add gismap
 ```
@@ -22,7 +22,7 @@ $ uv add gismap
 
 ## From sources
 
-The sources for Generic Information Search: Mapping and Analysis of Publications can be downloaded from the [Github repo].
+The sources for GisMap can be downloaded from the [Github repo].
 
 You can either clone the public repository:
 

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/cedric.ipynb

@@ -23,7 +23,11 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "from gismap.lab_examples.cedric import CedricFull"
+    "from gismap.lab_examples.cedric import CedricFull\n",
+    "from gismap.utils.logger import logger\n",
+    "import logging\n",
+    "\n",
+    "logger.setLevel(logging.ERROR)"
    ]
   },
   {

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/egomap.ipynb

@@ -118,9 +118,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "nidhi = Map(\n",
-    "    \"Nidhi Hegde (img: https://sites.ualberta.ca/~nidhih/images/circle1.png)\"\n",
-    ")\n",
+    "nidhi = Map(\"Nidhi Hegde (img: https://sites.ualberta.ca/~nidhih/images/circle1.png)\")\n",
     "nidhi.build(target=80)"
    ]
   },

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/lab_tutorial.ipynb

@@ -15,7 +15,7 @@
    "source": [
     ":::note\n",
     "\n",
-    "By defaut, we query both HAL and LDB. Don't hesitate to adapt depending on the use case.\n",
+    "By default, we query both HAL and LDB. Don't hesitate to adapt depending on the use case.\n",
     ":::"
    ]
   },
@@ -217,7 +217,7 @@
     "        \"Marc-Olivier Buob\",\n",
     "        \"Mohamed Lamine Lamali (hal:mohamed-lamine-lamali, ldb: 43/11358)\",\n",
     "    ],\n",
-    "    name=\"Gangsta\"\n",
+    "    name=\"Gangsta\",\n",
     ")\n",
     "lab.update_authors()\n",
     "lab.update_publis()\n",
@@ -229,7 +229,7 @@
    "id": "21",
    "metadata": {},
    "source": [
-    "Maps can be saved withe the `dump` method so you don't have to re-update them all the time."
+    "Maps can be saved with the `dump` method so you don't have to re-update them all the time."
    ]
   },
   {
@@ -249,7 +249,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "groups = {'Gangsta': {\"color\": \"rgb(255, 0, 255)\"}}\n",
+    "groups = {\"Gangsta\": {\"color\": \"rgb(255, 0, 255)\"}}\n",
     "lab.show_html(groups=groups)"
    ]
   },
@@ -289,7 +289,7 @@
    "source": [
     "Few things about the generated graph:\n",
     "\n",
-    "- Authors are represented with their initials unless some picture url is provided (implicitly or explictly).\n",
+    "- Authors are represented with their initials unless some picture url is provided (implicitly or explicitly).\n",
     "- Comets are singletons (authors with no co-publications with the other nodes). They are hidden by default. For example, if you only show the moons / usual suspects, Bernard becomes a comet and is hidden.\n",
     "- You can hover an author to get her name. If you click, you have a modal with the list of publications.\n",
     "- The width and length of an edge depend on the number of co-publications. If you click you have a modal with the list of co-publications."

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/lamsade.ipynb

@@ -24,6 +24,11 @@
    "outputs": [],
    "source": [
     "from gismap.lab_examples.lamsade import Lamsade\n",
+    "from gismap.utils.logger import logger\n",
+    "import logging\n",
+    "\n",
+    "logger.setLevel(logging.ERROR)\n",
+    "\n",
     "lamsade = Lamsade()\n",
     "lamsade.update_authors()\n",
     "lamsade.update_publis()\n",

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/lincs.ipynb

@@ -32,6 +32,10 @@
    "outputs": [],
    "source": [
     "from gismap.lab_examples.lincs import LINCS\n",
+    "from gismap.utils.logger import logger\n",
+    "import logging\n",
+    "\n",
+    "logger.setLevel(logging.ERROR)\n",
     "\n",
     "lincs = LINCS()\n",
     "lincs.update_authors()\n",

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/lip6.ipynb

@@ -23,7 +23,7 @@
    "id": "2",
    "metadata": {},
    "source": [
-    "There will be a lot of warnings in this, so do not display them."
+    "There will be a lot of warnings in this notebook, so we disable them."
    ]
   },
   {

{gismap-0.4.0 → gismap-0.4.1}/docs/tutorials/toulouse.ipynb

@@ -32,6 +32,10 @@
    "outputs": [],
    "source": [
     "from gismap.lab_examples.toulouse import SolaceMap as Solace\n",
+    "from gismap.utils.logger import logger\n",
+    "import logging\n",
+    "\n",
+    "logger.setLevel(logging.ERROR)\n",
     "\n",
     "solace = Solace()\n",
     "solace.update_authors()\n",

gismap-0.4.1/gismap/build.py

@@ -0,0 +1,26 @@
+"""
+Build script for creating the LDB (Local DBLP) database.
+
+Run as a module to download and process the DBLP dataset:
+
+    python -m gismap.build
+
+This will fetch the DBLP RDF dump from the website and create a compressed local database.
+"""
+
+if __name__ == "__main__":
+    import argparse
+    from gismap.sources.ldb import LDB
+
+    parser = argparse.ArgumentParser(
+        description="Build LDB database from DBLP TTL dump."
+    )
+    parser.add_argument(
+        "--no-search",
+        action="store_true",
+        help="Exclude search engine from output (for GitHub assets).",
+    )
+    args = parser.parse_args()
+
+    LDB.build_db()
+    LDB.dump_db(include_search=not args.no_search)

{gismap-0.4.0 → gismap-0.4.1}/gismap/gisgraphs/builder.py

@@ -27,22 +27,37 @@ gislink = tags.a(
 
 def make_vis(lab, **kwargs):
     """
+    Generate HTML visualization of a lab's collaboration network.
+
     Parameters
     ----------
     lab: :class:`~gismap.lab.labmap.LabMap`
         Lab to display.
-
-    Other parameters
-    ----------------
-    uid: :class:`str`
-        Unique identifier.
-    vis_url: :class:`str`
-        Location of visJS network.
+    uid: :class:`str`, optional
+        Unique identifier for DOM elements. Auto-generated if not provided.
+    vis_url: :class:`str`, optional
+        URL to vis-network library.
+    groups: :class:`dict`, optional
+        Group styling configuration.
+    draw_legend: :class:`bool`, optional
+        Whether to draw the legend. Defaults to True if multiple groups.
+    physics: :class:`dict`, optional
+        Physics engine configuration.
+    nodes_options: :class:`dict`, optional
+        Node styling options.
+    edges_options: :class:`dict`, optional
+        Edge styling options.
+    interaction_options: :class:`dict`, optional
+        Interaction settings.
+    style: :class:`string.Template`, optional
+        CSS template.
+    script: :class:`string.Template`, optional
+        JavaScript template.
 
     Returns
     -------
     :class:`str`
-        HTML code.
+        HTML code as a string.
     """
     uid = kwargs.pop("uid", None)
     if uid is None:

{gismap-0.4.0 → gismap-0.4.1}/gismap/gisgraphs/graph.py

@@ -21,6 +21,21 @@ def initials(name):
 
 
 def linkify(name, url):
+    """
+    Wrap a name in an HTML link if URL is provided.
+
+    Parameters
+    ----------
+    name : :class:`str`
+        Display text.
+    url : :class:`str` or None
+        Target URL, or None for no link.
+
+    Returns
+    -------
+    :class:`str`
+        HTML anchor tag or span.
+    """
     if url:
         return f'<a href="{url}" target="_blank">{name}</a>'
     else: