girder-worker 5.0.5.dev4__tar.gz → 5.0.5.dev8__tar.gz

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Files changed (75) hide show
  1. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/PKG-INFO +1 -1
  2. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/tasks/__init__.py +4 -4
  3. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/PKG-INFO +1 -1
  4. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/MANIFEST.in +0 -0
  5. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/.gitignore +0 -0
  6. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/__init__.py +0 -0
  7. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/_test_plugins/__init__.py +0 -0
  8. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/_test_plugins/plugins.py +0 -0
  9. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/_test_plugins/tasks.py +0 -0
  10. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/app.py +0 -0
  11. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/celeryconfig.py +0 -0
  12. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/context/__init__.py +0 -0
  13. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/context/girder_context.py +0 -0
  14. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/context/nongirder_context.py +0 -0
  15. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/__init__.py +0 -0
  16. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/io/__init__.py +0 -0
  17. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/io/girder.py +0 -0
  18. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/nvidia.py +0 -0
  19. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/stream_adapter.py +0 -0
  20. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/transforms/__init__.py +0 -0
  21. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/transforms/girder.py +0 -0
  22. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/utils.py +0 -0
  23. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/entrypoint.py +0 -0
  24. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/log_utils.py +0 -0
  25. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/task.py +0 -0
  26. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/__init__.py +0 -0
  27. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/decorators.py +0 -0
  28. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tee.py +0 -0
  29. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/__init__.py +0 -0
  30. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/contrib/__init__.py +0 -0
  31. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/contrib/girder_io_test.py +0 -0
  32. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/decorators_test.py +0 -0
  33. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/fake_dir/file1.txt +0 -0
  34. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/fake_dir/file2.txt +0 -0
  35. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/fake_dir/subdir/file3.txt +0 -0
  36. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/girder_io_test.py +0 -0
  37. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/tee_test.py +0 -0
  38. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/transform_test.py +0 -0
  39. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/tests/types_test.py +0 -0
  40. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/transform.py +0 -0
  41. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/transforms/__init__.py +0 -0
  42. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/transforms/common.py +0 -0
  43. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/transforms/contrib/__init__.py +0 -0
  44. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/transforms/contrib/girder_io.py +0 -0
  45. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/transforms/girder_io.py +0 -0
  46. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/__init__.py +0 -0
  47. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/base.py +0 -0
  48. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/boolean.py +0 -0
  49. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/choice.py +0 -0
  50. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/color.py +0 -0
  51. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/girder.py +0 -0
  52. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/girder_folder.py +0 -0
  53. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/girder_item.py +0 -0
  54. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/integer.py +0 -0
  55. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/number.py +0 -0
  56. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/number_choice.py +0 -0
  57. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/number_multichoice.py +0 -0
  58. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/number_vector.py +0 -0
  59. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/range.py +0 -0
  60. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/string.py +0 -0
  61. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/string_choice.py +0 -0
  62. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/string_multichoice.py +0 -0
  63. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/string_vector.py +0 -0
  64. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/utils/types/vector.py +0 -0
  65. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/worker.dist.cfg +0 -0
  66. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/SOURCES.txt +0 -0
  67. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/dependency_links.txt +0 -0
  68. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/entry_points.txt +0 -0
  69. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/not-zip-safe +0 -0
  70. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/requires.txt +0 -0
  71. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/top_level.txt +0 -0
  72. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/pyproject.toml +0 -0
  73. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/requirements.in +0 -0
  74. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/setup.cfg +0 -0
  75. {girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/setup.py +0 -0
{girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: girder-worker
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- Version: 5.0.5.dev4
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+ Version: 5.0.5.dev8
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  Summary: Batch execution engine built on celery.
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  Home-page: https://github.com/girder/girder_worker
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  Author: Kitware, Inc.
{girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker/docker/tasks/__init__.py RENAMED
@@ -358,11 +358,11 @@ class DockerTask(Task):
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  def _add_environment_kargs(run_kwargs):
361
- envkey = 'GIRDER_WORKER_DOCKER_RUN_OPTIONS'
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- if envkey not in os.environ:
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+ val = os.environ.get('GIRDER_WORKER_DOCKER_RUN_OPTIONS')
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+ if not val:
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  return
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  try:
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- opts = json.loads(os.environ[envkey])
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+ opts = json.loads(val)
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  extra_run_kwargs = {k: v for k, v in opts.items() if k not in BLACKLISTED_DOCKER_RUN_ARGS}
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  run_kwargs.update(extra_run_kwargs)
368
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  if 'volumes' in opts:
@@ -376,7 +376,7 @@ def _add_environment_kargs(run_kwargs):
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  run_kwargs['volumes'] = {}
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  run_kwargs['volumes'].update(opts['volumes'])
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  except Exception:
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- logger.exception(f'Failed to parse {envkey}')
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+ logger.exception('Failed to parse GIRDER_WORKER_DOCKER_RUN_OPTIONS')
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  def _docker_run(task, image, pull_image=True, entrypoint=None, container_args=None,
{girder_worker-5.0.5.dev4 → girder_worker-5.0.5.dev8}/girder_worker.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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2
  Name: girder-worker
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- Version: 5.0.5.dev4
3
+ Version: 5.0.5.dev8
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  Summary: Batch execution engine built on celery.
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  Home-page: https://github.com/girder/girder_worker
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  Author: Kitware, Inc.