girder-worker 0.10.6.dev5__tar.gz → 0.10.7.dev5__tar.gz

{girder_worker-0.10.6.dev5/girder_worker.egg-info → girder_worker-0.10.7.dev5}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: girder-worker
-Version: 0.10.6.dev5
+Version: 0.10.7.dev5
 Summary: Batch execution engine built on celery.
 Home-page: https://github.com/girder/girder_worker
 Author: Kitware, Inc.

{girder_worker-0.10.6.dev5 → girder_worker-0.10.7.dev5}/girder_worker/docker/tasks/__init__.py

@@ -49,6 +49,10 @@ def _pull_image(image):
         raise
 
 
+def _is_no_such_container(exc):
+    return 'No such container' in str(exc) or type(exc).__name__ == 'NotFound'
+
+
 def _get_docker_network():
     try:
         ip = socket.gethostbyname(socket.gethostname())
@@ -57,10 +61,23 @@ def _get_docker_network():
             client = docker.from_env(version='auto', timeout=timeout)
         else:
             client = docker.from_env(version='auto')
-        for container in client.containers.list(all=True, filters={'status': 'running'}):
-            for nw in container.attrs['NetworkSettings']['Networks'].values():
+        # we use client.api.containers rather than client.containers.list
+        # because containers.lists casts to a list which can throw an
+        # exception rather than allowing graceful handling.
+        for container in client.api.containers(all=True, filters={'status': ['running']}):
+            cid = container.get('Id') or container.get('ID')
+            if not cid:
+                continue
+            try:
+                data = client.api.inspect_container(cid)
+            except Exception as exc:
+                if _is_no_such_container(exc):
+                    continue
+                raise
+            networks = (data.get('NetworkSettings', {}) or {}).get('Networks', {}) or {}
+            for nw in networks.values():
                 if nw['IPAddress'] == ip:
-                    return 'container:%s' % container.id
+                    return 'container:%s' % cid
     except Exception:
         logger.exception('Failed to get docker network')
 
@@ -68,12 +85,23 @@ def _get_docker_network():
 def _remove_stopped_container(client, name):
     if name is None:
         return
-    for container in client.containers.list(all=True, filters={'name': name}):
-        try:
-            logger.info('Removing container %s ' % (name))
-            container.remove()
-        except Exception:
-            pass
+    # we use client.api.containers rather than client.containers.list
+    # because containers.lists casts to a list which can throw an
+    # exception rather than allowing graceful handling.
+    try:
+        for container in client.api.containers(all=True, filters={'name': [name]}):
+            cid = container.get('Id') or container.get('ID')
+            if not cid:
+                continue
+            try:
+                logger.info('Removing container %s ' % (name))
+                client.api.remove_container(cid)
+            except Exception:
+                pass
+    except Exception as exc:
+        if _is_no_such_container(exc):
+            return
+        raise
 
 
 def _run_container(image, container_args,  **kwargs):

{girder_worker-0.10.6.dev5 → girder_worker-0.10.7.dev5/girder_worker.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: girder-worker
-Version: 0.10.6.dev5
+Version: 0.10.7.dev5
 Summary: Batch execution engine built on celery.
 Home-page: https://github.com/girder/girder_worker
 Author: Kitware, Inc.

{girder_worker-0.10.6.dev5 → girder_worker-0.10.7.dev5}/girder_worker.egg-info/SOURCES.txt

@@ -38,6 +38,8 @@ girder_worker.egg-info/dependency_links.txt
 girder_worker.egg-info/entry_points.txt
 girder_worker.egg-info/not-zip-safe
 girder_worker.egg-info/requires.txt
+girder_worker.egg-info/scm_file_list.json
+girder_worker.egg-info/scm_version.json
 girder_worker.egg-info/top_level.txt
 girder_worker/_test_plugins/__init__.py
 girder_worker/_test_plugins/plugins.py

girder_worker-0.10.7.dev5/girder_worker.egg-info/scm_file_list.json

@@ -0,0 +1,157 @@
+{
+  "files": [
+    ".codecov.yml",
+    ".coveragerc.pytest",
+    ".dockerignore",
+    ".gitignore",
+    "CHANGELOG.rst",
+    "CONTRIBUTING.md",
+    "CTestConfig.cmake",
+    "Dockerfile",
+    "HACKING.md",
+    "LICENSE",
+    "MANIFEST.in",
+    "NOTICE",
+    "README.rst",
+    "TRANSITION.md",
+    "docker-compose.yml",
+    "docker-entrypoint.sh",
+    "docker.env",
+    "pyproject.toml",
+    "requirements-dev.in",
+    "requirements.in",
+    "requirements.txt",
+    "setup.py",
+    "tox.ini",
+    ".circleci/config.yml",
+    "docs/Makefile",
+    "docs/api-docs.rst",
+    "docs/builtin-plugins.rst",
+    "docs/conf.py",
+    "docs/developer-docs.rst",
+    "docs/getting-started.rst",
+    "docs/important-differences.rst",
+    "docs/index.rst",
+    "docs/installation.rst",
+    "docs/license.png",
+    "docs/plugins.rst",
+    "docs/using-from-girder.rst",
+    "docs/static/data.json",
+    "docs/static/facebook-data.json",
+    "docs/static/facebook-example-spec.json",
+    "docs/static/facebook-example-workflow.png",
+    "docs/static/facebook-example-workflow.xml",
+    "docs/static/facebook-example.css",
+    "docs/static/facebook-example.html",
+    "docs/static/facebook-example.js",
+    "docs/static/facebook-sample-data.txt",
+    "docs/static/favicon.png",
+    "docs/static/lenna.jpg",
+    "docs/static/lenna10.jpg",
+    "docs/static/sidebar.png",
+    "docs/templates/page.html",
+    "examples/plugin_example/.gitignore",
+    "examples/plugin_example/README.md",
+    "examples/plugin_example/example_client.py",
+    "examples/plugin_example/setup.py",
+    "examples/plugin_example/gwexample/__init__.py",
+    "examples/plugin_example/gwexample/analyses/__init__.py",
+    "examples/plugin_example/gwexample/analyses/tasks.py",
+    "girder_worker/.gitignore",
+    "girder_worker/__init__.py",
+    "girder_worker/__main__.py",
+    "girder_worker/app.py",
+    "girder_worker/celeryconfig.py",
+    "girder_worker/configure.py",
+    "girder_worker/entrypoint.py",
+    "girder_worker/log_utils.py",
+    "girder_worker/task.py",
+    "girder_worker/utils.py",
+    "girder_worker/worker.dist.cfg",
+    "girder_worker/_test_plugins/__init__.py",
+    "girder_worker/_test_plugins/plugins.py",
+    "girder_worker/_test_plugins/tasks.py",
+    "girder_worker/context/__init__.py",
+    "girder_worker/context/girder_context.py",
+    "girder_worker/context/nongirder_context.py",
+    "girder_worker/docker/__init__.py",
+    "girder_worker/docker/nvidia.py",
+    "girder_worker/docker/stream_adapter.py",
+    "girder_worker/docker/utils.py",
+    "girder_worker/docker/io/__init__.py",
+    "girder_worker/docker/io/girder.py",
+    "girder_worker/docker/tasks/__init__.py",
+    "girder_worker/docker/transforms/__init__.py",
+    "girder_worker/docker/transforms/girder.py",
+    "girder_worker/girder_plugin/__init__.py",
+    "girder_worker/girder_plugin/celery.py",
+    "girder_worker/girder_plugin/constants.py",
+    "girder_worker/girder_plugin/event_handlers.py",
+    "girder_worker/girder_plugin/status.py",
+    "girder_worker/girder_plugin/utils.py",
+    "girder_worker/girder_plugin/api/__init__.py",
+    "girder_worker/girder_plugin/api/worker.py",
+    "girder_worker/girder_plugin/web_client/JobStatus.js",
+    "girder_worker/girder_plugin/web_client/main.js",
+    "girder_worker/girder_plugin/web_client/package.json",
+    "girder_worker/girder_plugin/web_client/routes.js",
+    "girder_worker/girder_plugin/web_client/stylesheets/jobDetailsWidget.styl",
+    "girder_worker/girder_plugin/web_client/stylesheets/taskStatusView.styl",
+    "girder_worker/girder_plugin/web_client/templates/configView.pug",
+    "girder_worker/girder_plugin/web_client/templates/taskStatusView.pug",
+    "girder_worker/girder_plugin/web_client/views/ConfigView.js",
+    "girder_worker/girder_plugin/web_client/views/taskStatusView.js",
+    "scripts/install_requirements.py",
+    "tests/__init__.py",
+    "tests/config_test.py",
+    "tests/conftest.py",
+    "tests/task_cancellation_test.py",
+    "tests/task_plugin_test.py",
+    "tests/task_signal_test.py",
+    "tests/test_app.py",
+    "tests/test_docker_io.py",
+    "tests/test_docker_nvidia.py",
+    "tests/test_docker_stream_adapter.py",
+    "tests/test_docker_tasks.py",
+    "tests/test_docker_transforms.py",
+    "tests/test_docker_utils.py",
+    "tests/test_girder_plugin.py",
+    "tests/test_utils.py",
+    "tests/integration/.gitignore",
+    "tests/integration/Dockerfile.girder-py3",
+    "tests/integration/Dockerfile.girder_worker-py3",
+    "tests/integration/Makefile",
+    "tests/integration/README.md",
+    "tests/integration/__init__.py",
+    "tests/integration/conftest.py",
+    "tests/integration/docker-compose.py3.yml",
+    "tests/integration/docker-compose.yml",
+    "tests/integration/requirements.txt",
+    "tests/integration/test_celery.py",
+    "tests/integration/test_docker.py",
+    "tests/integration/utilities.py",
+    "tests/integration/common_tasks/setup.py",
+    "tests/integration/common_tasks/common_tasks/__init__.py",
+    "tests/integration/common_tasks/common_tasks/test_tasks/__init__.py",
+    "tests/integration/common_tasks/common_tasks/test_tasks/cancel.py",
+    "tests/integration/common_tasks/common_tasks/test_tasks/fail.py",
+    "tests/integration/common_tasks/common_tasks/test_tasks/fib.py",
+    "tests/integration/common_tasks/common_tasks/test_tasks/girder_client.py",
+    "tests/integration/fixtures/read.txt",
+    "tests/integration/fixtures/docker_test_image/Dockerfile",
+    "tests/integration/fixtures/docker_test_image/test.py",
+    "tests/integration/integration_test_endpoints/plugin.yml",
+    "tests/integration/integration_test_endpoints/setup.py",
+    "tests/integration/integration_test_endpoints/integration_test_endpoints/__init__.py",
+    "tests/integration/integration_test_endpoints/integration_test_endpoints/docker.py",
+    "tests/integration/integration_test_endpoints/integration_test_endpoints/raw.py",
+    "tests/integration/integration_test_endpoints/integration_test_endpoints/utilities.py",
+    "tests/integration/scripts/.gitignore",
+    "tests/integration/scripts/ansible.cfg",
+    "tests/integration/scripts/girder_entrypoint.sh",
+    "tests/integration/scripts/gw_entrypoint.sh",
+    "tests/integration/scripts/inventory",
+    "tests/integration/scripts/setup.yml",
+    "tests/integration/scripts/wait-for-it.sh"
+  ]
+}

girder_worker-0.10.7.dev5/girder_worker.egg-info/scm_version.json

@@ -0,0 +1,8 @@
+{
+  "tag": "0.10.6",
+  "distance": 5,
+  "node": "ga8a9edf37465d114f87bc932dffb222606b9430c",
+  "dirty": false,
+  "branch": "master",
+  "node_date": "2026-07-28"
+}

{girder_worker-0.10.6.dev5 → girder_worker-0.10.7.dev5}/requirements.txt

@@ -22,9 +22,9 @@ bcrypt==5.0.0
     # via girder
 billiard==4.2.4
     # via celery
-boto3==1.42.77
+boto3==1.42.91
     # via girder
-botocore==1.42.77
+botocore==1.42.91
     # via
     #   boto3
     #   girder
@@ -37,7 +37,7 @@ certifi==2026.2.25
     # via requests
 cffi==2.0.0
     # via cryptography
-charset-normalizer==3.4.6
+charset-normalizer==3.4.7
     # via requests
 cheroot==11.1.2
     # via
@@ -45,7 +45,7 @@ cheroot==11.1.2
     #   girder
 cherrypy==18.10.0
     # via girder
-click==8.3.1
+click==8.3.2
     # via
     #   celery
     #   click-didyoumean
@@ -71,7 +71,7 @@ coverage[toml]==7.13.5
     #   pytest-cov
 coveralls==4.1.0
     # via -r requirements-dev.in
-cryptography==46.0.6
+cryptography==46.0.7
     # via pyopenssl
 decorator==5.2.1
     # via dogpile-cache
@@ -93,7 +93,7 @@ exceptiongroup==1.3.1
     # via
     #   celery
     #   pytest
-filelock==3.25.2
+filelock==3.29.0
     # via
     #   girder
     #   python-discovery
@@ -110,18 +110,18 @@ flake8-docstrings==1.7.0
     # via -r requirements-dev.in
 flake8-quotes==3.4.0
     # via -r requirements-dev.in
-girder==3.2.13
+girder==3.2.14
     # via
     #   -r requirements-dev.in
     #   girder-jobs
     #   pytest-girder
-girder-client==3.2.13
+girder-client==3.2.14
     # via
     #   -r requirements.in
     #   girder-worker-utils
-girder-jobs==3.2.13
+girder-jobs==3.2.14
     # via -r requirements-dev.in
-girder-worker-utils==0.9.5
+girder-worker-utils==0.9.6
     # via -r requirements.in
 httmock==1.4.0
     # via -r requirements-dev.in
@@ -160,9 +160,9 @@ jsonschema-specifications==2025.9.1
     # via jsonschema
 kombu==5.6.2
     # via celery
-lxml==6.0.2
+lxml==6.1.0
     # via -r requirements-dev.in
-mako==1.3.10
+mako==1.3.11
     # via girder
 markdown-it-py==4.0.0
     # via rich
@@ -178,13 +178,13 @@ mock==5.2.0
     # via -r requirements-dev.in
 mongomock==4.3.0
     # via pytest-girder
-more-itertools==10.8.0
+more-itertools==11.0.2
     # via
     #   cheroot
     #   cherrypy
     #   jaraco-functools
     #   jaraco-text
-packaging==26.0
+packaging==26.1
     # via
     #   girder
     #   kombu
@@ -195,7 +195,7 @@ packaging==26.0
     #   sphinx
     #   tox
     #   vcs-versioning
-platformdirs==4.9.4
+platformdirs==4.9.6
     # via
     #   python-discovery
     #   tox
@@ -221,7 +221,7 @@ pydocstyle==6.3.0
     #   flake8-docstrings
 pyflakes==3.4.0
     # via flake8
-pygments==2.19.2
+pygments==2.20.0
     # via
     #   pytest
     #   rich
@@ -237,7 +237,7 @@ pyotp==2.9.0
     # via girder
 pyproject-api==1.10.0
     # via tox
-pytest==9.0.2
+pytest==9.0.3
     # via
     #   -r requirements-dev.in
     #   pytest-cov
@@ -246,7 +246,7 @@ pytest-cov==7.1.0
     # via
     #   -r requirements-dev.in
     #   pytest-girder
-pytest-girder==3.2.13
+pytest-girder==3.2.14
     # via -r requirements-dev.in
 python-dateutil==2.9.0.post0
     # via
@@ -254,8 +254,10 @@ python-dateutil==2.9.0.post0
     #   celery
     #   girder
     #   tempora
-python-discovery==1.2.0
-    # via virtualenv
+python-discovery==1.2.2
+    # via
+    #   tox
+    #   virtualenv
 pytz==2026.1.post1
     # via
     #   girder
@@ -268,7 +270,7 @@ referencing==0.37.0
     # via
     #   jsonschema
     #   jsonschema-specifications
-requests[security]==2.33.0
+requests[security]==2.33.1
     # via
     #   -r requirements.in
     #   coveralls
@@ -281,7 +283,7 @@ requests[security]==2.33.0
     #   sphinx
 requests-toolbelt==1.0.0
     # via girder-client
-rich==14.3.3
+rich==15.0.0
     # via typer
 rpds-py==0.30.0
     # via
@@ -291,7 +293,7 @@ s3transfer==0.16.0
     # via boto3
 sentinels==1.1.1
     # via mongomock
-setuptools-scm==10.0.3
+setuptools-scm==10.0.5
     # via
     #   -r requirements.in
     #   girder-worker-utils
@@ -341,7 +343,7 @@ tomli==2.4.1
     #   vcs-versioning
 tomli-w==1.2.0
     # via tox
-tox==4.50.3
+tox==4.53.0
     # via -r requirements-dev.in
 typer==0.24.1
     # via
@@ -360,7 +362,7 @@ typing-extensions==4.15.0
     #   tox
     #   vcs-versioning
     #   virtualenv
-tzdata==2025.3
+tzdata==2026.1
     # via kombu
 tzlocal==5.3.1
     # via celery
@@ -371,14 +373,14 @@ urllib3==2.6.3
     #   docker
     #   girder-worker-utils
     #   requests
-vcs-versioning==1.0.1
+vcs-versioning==1.1.1
     # via setuptools-scm
 vine==5.1.0
     # via
     #   amqp
     #   celery
     #   kombu
-virtualenv==21.2.0
+virtualenv==21.2.4
     # via tox
 wcwidth==0.6.0
     # via prompt-toolkit

{girder_worker-0.10.6.dev5 → girder_worker-0.10.7.dev5}/tox.ini

@@ -9,7 +9,7 @@ deps = coverage
 commands = coverage erase --rcfile=.coveragerc.pytest
 
 [testenv]
-commands = pytest \
+commands = python -m pytest \
   --cov=girder_worker \
   --cov-append \
   --cov-config=.coveragerc.pytest \