girder-large-image 1.28.3.dev10__tar.gz → 1.28.3.dev14__tar.gz

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  1. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/PKG-INFO +3 -3
  2. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/rest/large_image_resource.py +15 -4
  3. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/PKG-INFO +3 -3
  4. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/requires.txt +2 -2
  5. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/LICENSE +0 -0
  6. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/README.rst +0 -0
  7. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/__init__.py +0 -0
  8. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/constants.py +0 -0
  9. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/girder_tilesource.py +0 -0
  10. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/loadmodelcache.py +0 -0
  11. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/models/__init__.py +0 -0
  12. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/models/image_item.py +0 -0
  13. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/rest/__init__.py +0 -0
  14. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/rest/item_meta.py +0 -0
  15. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/rest/tiles.py +0 -0
  16. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/eventStream.js +0 -0
  17. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/extra/.gitignore +0 -0
  18. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/index.js +0 -0
  19. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/main.js +0 -0
  20. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/package.json +0 -0
  21. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/routes.js +0 -0
  22. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/fileList.styl +0 -0
  23. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/imageViewerSelectWidget.styl +0 -0
  24. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/itemList.styl +0 -0
  25. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/itemView.styl +0 -0
  26. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/itemViewCodemirror.styl +0 -0
  27. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/largeImageConfig.styl +0 -0
  28. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/stylesheets/metadataWidget.styl +0 -0
  29. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/imageViewerSelectWidget.pug +0 -0
  30. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/itemList.pug +0 -0
  31. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/itemView.pug +0 -0
  32. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/itemViewCodemirror.pug +0 -0
  33. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/largeImageConfig.pug +0 -0
  34. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/largeImage_fileAction.pug +0 -0
  35. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/metadataWidget.pug +0 -0
  36. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/templates/metadatumEditWidget.pug +0 -0
  37. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/configView.js +0 -0
  38. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/fileList.js +0 -0
  39. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerSelectWidget.js +0 -0
  40. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/base.js +0 -0
  41. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/geojs.js +0 -0
  42. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/index.js +0 -0
  43. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/leaflet.js +0 -0
  44. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/openlayers.js +0 -0
  45. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/openseadragon.js +0 -0
  46. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/setFrameQuad.js +0 -0
  47. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/imageViewerWidget/slideatlas.js +0 -0
  48. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/index.js +0 -0
  49. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/itemList.js +0 -0
  50. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/itemView.js +0 -0
  51. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/itemViewCodemirror.js +0 -0
  52. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/itemViewWidget.js +0 -0
  53. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/views/metadataWidget.js +0 -0
  54. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/components/CompositeLayers.vue +0 -0
  55. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/components/DualInput.vue +0 -0
  56. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/components/FrameSelector.vue +0 -0
  57. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/components/HistogramEditor.vue +0 -0
  58. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/components/PresetsMenu.vue +0 -0
  59. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/utils/clamp.js +0 -0
  60. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/utils/colors.js +0 -0
  61. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/vue/utils/drag.js +0 -0
  62. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image/web_client/webpack.helper.js +0 -0
  63. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/SOURCES.txt +0 -0
  64. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/dependency_links.txt +0 -0
  65. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/entry_points.txt +0 -0
  66. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/not-zip-safe +0 -0
  67. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/girder_large_image.egg-info/top_level.txt +0 -0
  68. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/pyproject.toml +0 -0
  69. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/setup.cfg +0 -0
  70. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/setup.py +0 -0
  71. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/__init__.py +0 -0
  72. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/conftest.py +0 -0
  73. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/girder_utilities.py +0 -0
  74. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/test_large_image.py +0 -0
  75. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/test_tiles_rest.py +0 -0
  76. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/test_web_client.py +0 -0
  77. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/web_client_specs/.eslintrc +0 -0
  78. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/web_client_specs/imageViewerSpec.js +0 -0
  79. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/web_client_specs/largeImageSpec.js +0 -0
  80. {girder-large-image-1.28.3.dev10 → girder-large-image-1.28.3.dev14}/test_girder/web_client_specs/otherFeatures.js +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: girder-large-image
3
- Version: 1.28.3.dev10
3
+ Version: 1.28.3.dev14
4
4
  Summary: A Girder plugin to work with large, multiresolution images.
5
5
  Home-page: https://github.com/girder/large_image
6
6
  Author: Kitware, Inc.
@@ -19,9 +19,9 @@ Requires-Python: >=3.8
19
19
  License-File: LICENSE
20
20
  Requires-Dist: girder>=3.1.18
21
21
  Requires-Dist: girder-jobs>=3.0.3
22
- Requires-Dist: large_image>=1.28.3.dev10
22
+ Requires-Dist: large_image>=1.28.3.dev14
23
23
  Provides-Extra: tasks
24
- Requires-Dist: large-image-tasks[girder]>=1.28.3.dev10; extra == "tasks"
24
+ Requires-Dist: large-image-tasks[girder]>=1.28.3.dev14; extra == "tasks"
25
25
  Requires-Dist: girder-worker[girder]>=0.6.0; extra == "tasks"
26
26
 
27
27
  A Girder plugin to work with large, multiresolution images.
@@ -26,6 +26,7 @@ import threading
26
26
  import time
27
27
 
28
28
  import cherrypy
29
+ import pymongo
29
30
  from girder_jobs.constants import JobStatus
30
31
  from girder_jobs.models.job import Job
31
32
 
@@ -34,7 +35,7 @@ from girder import logger
34
35
  from girder.api import access
35
36
  from girder.api.describe import Description, autoDescribeRoute, describeRoute
36
37
  from girder.api.rest import Resource
37
- from girder.constants import TokenScope
38
+ from girder.constants import SortDir, TokenScope
38
39
  from girder.exceptions import RestException
39
40
  from girder.models.file import File
40
41
  from girder.models.item import Item
@@ -122,7 +123,7 @@ def createThumbnailsJob(job):
122
123
  thread.start()
123
124
 
124
125
 
125
- def createThumbnailsJobThread(job):
126
+ def createThumbnailsJobThread(job): # noqa
126
127
  """
127
128
  Create thumbnails for all of the large image items.
128
129
 
@@ -160,7 +161,9 @@ def createThumbnailsJobThread(job):
160
161
  pool = concurrent.futures.ThreadPoolExecutor(max_workers=concurrency)
161
162
  try:
162
163
  # Get a cursor with the list of images
163
- items = Item().find({'largeImage.fileId': {'$exists': True}})
164
+ query = {'largeImage.fileId': {'$exists': True}}
165
+ sort = [('_id', SortDir.ASCENDING)]
166
+ items = Item().find(query, sort=sort)
164
167
  if hasattr(items, 'count'):
165
168
  status['items'] = items.count()
166
169
  status['specs'] = len(spec)
@@ -173,7 +176,15 @@ def createThumbnailsJobThread(job):
173
176
  # be exhausted before we are done.
174
177
  while len(tasks) < concurrency * 4 and nextitem is not None:
175
178
  tasks.append(pool.submit(createThumbnailsJobTask, nextitem, spec))
176
- nextitem = cursorNextOrNone(items)
179
+ try:
180
+ nextitem = cursorNextOrNone(items)
181
+ except pymongo.errors.CursorNotFound:
182
+ # If the process takes long enough, the cursor is removed.
183
+ # In this case, redo the query and keep going.
184
+ items = Item().find(query, sort=sort)
185
+ nextitem = cursorNextOrNone(items)
186
+ if nextitem is not None:
187
+ query['_id'] = {'$gt': nextitem['_id']}
177
188
  # Wait a short time or until the oldest task is complete
178
189
  try:
179
190
  tasks[0].result(0.1)
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: girder-large-image
3
- Version: 1.28.3.dev10
3
+ Version: 1.28.3.dev14
4
4
  Summary: A Girder plugin to work with large, multiresolution images.
5
5
  Home-page: https://github.com/girder/large_image
6
6
  Author: Kitware, Inc.
@@ -19,9 +19,9 @@ Requires-Python: >=3.8
19
19
  License-File: LICENSE
20
20
  Requires-Dist: girder>=3.1.18
21
21
  Requires-Dist: girder-jobs>=3.0.3
22
- Requires-Dist: large_image>=1.28.3.dev10
22
+ Requires-Dist: large_image>=1.28.3.dev14
23
23
  Provides-Extra: tasks
24
- Requires-Dist: large-image-tasks[girder]>=1.28.3.dev10; extra == "tasks"
24
+ Requires-Dist: large-image-tasks[girder]>=1.28.3.dev14; extra == "tasks"
25
25
  Requires-Dist: girder-worker[girder]>=0.6.0; extra == "tasks"
26
26
 
27
27
  A Girder plugin to work with large, multiresolution images.
@@ -1,7 +1,7 @@
1
1
  girder>=3.1.18
2
2
  girder-jobs>=3.0.3
3
- large_image>=1.28.3.dev10
3
+ large_image>=1.28.3.dev14
4
4
 
5
5
  [tasks]
6
- large-image-tasks[girder]>=1.28.3.dev10
6
+ large-image-tasks[girder]>=1.28.3.dev14
7
7
  girder-worker[girder]>=0.6.0