geocif 0.2.55__tar.gz → 0.2.57__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {geocif-0.2.55/geocif.egg-info → geocif-0.2.57}/PKG-INFO +1 -1
- {geocif-0.2.55 → geocif-0.2.57}/geocif/geocif.py +4 -12
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/trainers.py +19 -2
- {geocif-0.2.55 → geocif-0.2.57/geocif.egg-info}/PKG-INFO +1 -1
- {geocif-0.2.55 → geocif-0.2.57}/setup.py +1 -1
- {geocif-0.2.55 → geocif-0.2.57}/LICENSE +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/MANIFEST.in +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/README.md +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/geoagmet.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/plot.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/utils.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/analysis.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/constants.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/features.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/geo.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/geocif.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/metadata.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/models.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/cei/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/cei/definitions.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/cei/indices.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/experiments.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/geocif_runner.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_algeria.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_angola.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_madagascar.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_malawi.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_mozambique.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_south_africa.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_zambia.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_zimbabwe.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/logger.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/correlations.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/embedding.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/feature_engineering.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/feature_selection.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/outliers.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/outlook.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/output.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/spatial_autocorrelation.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/stages.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/stats.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/trend.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/xai.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/mm.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/aa.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/aaaa.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/area.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/automl.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/download_esi.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/enso.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/eval.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/gamtest.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/gee_access.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/misc.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/play_xagg.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/reg.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/sustain.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/test_catboost.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp2.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp3.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp4.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp5.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita_maize_mask.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita_v2.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita_v3.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/risk/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/risk/impact_assessment.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/utils.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/__init__.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/gt.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/plot.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/tmp.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/viz_ml.py +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/SOURCES.txt +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/dependency_links.txt +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/not-zip-safe +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/top_level.txt +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/requirements.txt +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/setup.cfg +0 -0
- {geocif-0.2.55 → geocif-0.2.57}/tests/test_geocif.py +0 -0
@@ -297,11 +297,6 @@ class Geocif:
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verbose=False,
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)
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elif self.model_name in ["tabpfn"]:
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-
X_train = X_train.drop(
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columns=[
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item for item in self.cat_features if item != "Harvest Year"
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]
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)
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# Identify the column indices for cat_features in X_train
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if self.cat_features is None:
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cat_feature_indices = []
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@@ -381,6 +376,8 @@ class Geocif:
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X_train_scaled = pd.concat([X_scaled_numeric, X_region], axis=1)
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self.model.fit(X_train_scaled, self.y_train)
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elif self.model_name in ["desreg"]:
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self.model.fit(X_train, self.y_train)
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except Exception as e:
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self.logger.error(
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f"Error fitting model for {self.country} {self.crop} {e}"
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@@ -525,12 +522,7 @@ class Geocif:
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elif self.model_name == "ydf":
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y_pred = self.model.evaluate(X_test)
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best_hyperparameters = {}
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elif self.model_name
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X_test = X_test.drop(
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columns=[
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item for item in self.cat_features if item != "Harvest Year"
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]
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)
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elif self.model_name in ["tabpfn", "desreg"]:
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y_pred = self.model.predict(X_test)
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best_hyperparameters = {}
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else:
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@@ -1367,7 +1359,7 @@ class Geocif:
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self.cluster_strategy = "single"
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self.select_cei_by = "Index"
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self.use_cumulative_features = True
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elif self.model_name in ["tabpfn"]:
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elif self.model_name in ["tabpfn", "desreg"]:
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self.do_xai = False
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self.estimate_ci = False
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elif self.model_name in ["oblique", "ydf"]:
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@@ -306,12 +306,29 @@ def auto_train(
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# Identify the column indices for cat_features in X_train
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if cat_features is None:
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cat_feature_indices = []
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-
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else:
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cat_feature_indices = [X_train.columns.get_loc(col) for col in cat_features if
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col in X_train.columns]
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model = AutoTabPFNRegressor(max_time=600,
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#categorical_feature_indices=cat_feature_indices,
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ignore_pretraining_limits=True)
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elif model_name == "desreg":
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from desReg.des.DESRegression import DESRegression
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model_catboost = CatBoostRegressor(**hyperparams, cat_features=cat_features)
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from tabpfn_extensions.post_hoc_ensembles.sklearn_interface import AutoTabPFNRegressor
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# Identify the column indices for cat_features in X_train
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if cat_features is None:
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cat_feature_indices = []
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else:
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cat_feature_indices = [X_train.columns.get_loc(col) for col in cat_features if
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col in X_train.columns]
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model_tabpfn = AutoTabPFNRegressor(max_time=600,
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# categorical_feature_indices=cat_feature_indices,
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ignore_pretraining_limits=True)
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model = DESRegression(regressors_list=[model_catboost, model_tabpfn])
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elif model_name == "ngboost":
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if model_type == "REGRESSION":
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from ngboost import NGBRegressor
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