geocif 0.2.55__tar.gz → 0.2.57__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (89) hide show
  1. {geocif-0.2.55/geocif.egg-info → geocif-0.2.57}/PKG-INFO +1 -1
  2. {geocif-0.2.55 → geocif-0.2.57}/geocif/geocif.py +4 -12
  3. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/trainers.py +19 -2
  4. {geocif-0.2.55 → geocif-0.2.57/geocif.egg-info}/PKG-INFO +1 -1
  5. {geocif-0.2.55 → geocif-0.2.57}/setup.py +1 -1
  6. {geocif-0.2.55 → geocif-0.2.57}/LICENSE +0 -0
  7. {geocif-0.2.55 → geocif-0.2.57}/MANIFEST.in +0 -0
  8. {geocif-0.2.55 → geocif-0.2.57}/README.md +0 -0
  9. {geocif-0.2.55 → geocif-0.2.57}/geocif/__init__.py +0 -0
  10. {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/__init__.py +0 -0
  11. {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/geoagmet.py +0 -0
  12. {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/plot.py +0 -0
  13. {geocif-0.2.55 → geocif-0.2.57}/geocif/agmet/utils.py +0 -0
  14. {geocif-0.2.55 → geocif-0.2.57}/geocif/analysis.py +0 -0
  15. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/__init__.py +0 -0
  16. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/constants.py +0 -0
  17. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/features.py +0 -0
  18. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/geo.py +0 -0
  19. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/geocif.py +0 -0
  20. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/metadata.py +0 -0
  21. {geocif-0.2.55 → geocif-0.2.57}/geocif/backup/models.py +0 -0
  22. {geocif-0.2.55 → geocif-0.2.57}/geocif/cei/__init__.py +0 -0
  23. {geocif-0.2.55 → geocif-0.2.57}/geocif/cei/definitions.py +0 -0
  24. {geocif-0.2.55 → geocif-0.2.57}/geocif/cei/indices.py +0 -0
  25. {geocif-0.2.55 → geocif-0.2.57}/geocif/experiments.py +0 -0
  26. {geocif-0.2.55 → geocif-0.2.57}/geocif/geocif_runner.py +0 -0
  27. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner.py +0 -0
  28. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_algeria.py +0 -0
  29. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_angola.py +0 -0
  30. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_madagascar.py +0 -0
  31. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_malawi.py +0 -0
  32. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_mozambique.py +0 -0
  33. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_south_africa.py +0 -0
  34. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_zambia.py +0 -0
  35. {geocif-0.2.55 → geocif-0.2.57}/geocif/indices_runner_zimbabwe.py +0 -0
  36. {geocif-0.2.55 → geocif-0.2.57}/geocif/logger.py +0 -0
  37. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/__init__.py +0 -0
  38. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/correlations.py +0 -0
  39. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/embedding.py +0 -0
  40. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/feature_engineering.py +0 -0
  41. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/feature_selection.py +0 -0
  42. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/outliers.py +0 -0
  43. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/outlook.py +0 -0
  44. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/output.py +0 -0
  45. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/spatial_autocorrelation.py +0 -0
  46. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/stages.py +0 -0
  47. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/stats.py +0 -0
  48. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/trend.py +0 -0
  49. {geocif-0.2.55 → geocif-0.2.57}/geocif/ml/xai.py +0 -0
  50. {geocif-0.2.55 → geocif-0.2.57}/geocif/mm.py +0 -0
  51. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/__init__.py +0 -0
  52. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/aa.py +0 -0
  53. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/aaaa.py +0 -0
  54. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/area.py +0 -0
  55. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/automl.py +0 -0
  56. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/download_esi.py +0 -0
  57. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/enso.py +0 -0
  58. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/eval.py +0 -0
  59. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/gamtest.py +0 -0
  60. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/gee_access.py +0 -0
  61. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/misc.py +0 -0
  62. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/play_xagg.py +0 -0
  63. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/reg.py +0 -0
  64. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/sustain.py +0 -0
  65. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/test_catboost.py +0 -0
  66. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp.py +0 -0
  67. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp2.py +0 -0
  68. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp3.py +0 -0
  69. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp4.py +0 -0
  70. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/tmp5.py +0 -0
  71. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita.py +0 -0
  72. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita_maize_mask.py +0 -0
  73. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita_v2.py +0 -0
  74. {geocif-0.2.55 → geocif-0.2.57}/geocif/playground/wolayita_v3.py +0 -0
  75. {geocif-0.2.55 → geocif-0.2.57}/geocif/risk/__init__.py +0 -0
  76. {geocif-0.2.55 → geocif-0.2.57}/geocif/risk/impact_assessment.py +0 -0
  77. {geocif-0.2.55 → geocif-0.2.57}/geocif/utils.py +0 -0
  78. {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/__init__.py +0 -0
  79. {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/gt.py +0 -0
  80. {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/plot.py +0 -0
  81. {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/tmp.py +0 -0
  82. {geocif-0.2.55 → geocif-0.2.57}/geocif/viz/viz_ml.py +0 -0
  83. {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/SOURCES.txt +0 -0
  84. {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/dependency_links.txt +0 -0
  85. {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/not-zip-safe +0 -0
  86. {geocif-0.2.55 → geocif-0.2.57}/geocif.egg-info/top_level.txt +0 -0
  87. {geocif-0.2.55 → geocif-0.2.57}/requirements.txt +0 -0
  88. {geocif-0.2.55 → geocif-0.2.57}/setup.cfg +0 -0
  89. {geocif-0.2.55 → geocif-0.2.57}/tests/test_geocif.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: geocif
3
- Version: 0.2.55
3
+ Version: 0.2.57
4
4
  Summary: Models to visualize and forecast crop conditions and yields
5
5
  Home-page: https://ritviksahajpal.github.io/yield_forecasting/
6
6
  Author: Ritvik Sahajpal
@@ -297,11 +297,6 @@ class Geocif:
297
297
  verbose=False,
298
298
  )
299
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  elif self.model_name in ["tabpfn"]:
300
- X_train = X_train.drop(
301
- columns=[
302
- item for item in self.cat_features if item != "Harvest Year"
303
- ]
304
- )
305
300
  # Identify the column indices for cat_features in X_train
306
301
  if self.cat_features is None:
307
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  cat_feature_indices = []
@@ -381,6 +376,8 @@ class Geocif:
381
376
  X_train_scaled = pd.concat([X_scaled_numeric, X_region], axis=1)
382
377
 
383
378
  self.model.fit(X_train_scaled, self.y_train)
379
+ elif self.model_name in ["desreg"]:
380
+ self.model.fit(X_train, self.y_train)
384
381
  except Exception as e:
385
382
  self.logger.error(
386
383
  f"Error fitting model for {self.country} {self.crop} {e}"
@@ -525,12 +522,7 @@ class Geocif:
525
522
  elif self.model_name == "ydf":
526
523
  y_pred = self.model.evaluate(X_test)
527
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  best_hyperparameters = {}
528
- elif self.model_name == "tabpfn":
529
- X_test = X_test.drop(
530
- columns=[
531
- item for item in self.cat_features if item != "Harvest Year"
532
- ]
533
- )
525
+ elif self.model_name in ["tabpfn", "desreg"]:
534
526
  y_pred = self.model.predict(X_test)
535
527
  best_hyperparameters = {}
536
528
  else:
@@ -1367,7 +1359,7 @@ class Geocif:
1367
1359
  self.cluster_strategy = "single"
1368
1360
  self.select_cei_by = "Index"
1369
1361
  self.use_cumulative_features = True
1370
- elif self.model_name in ["tabpfn"]:
1362
+ elif self.model_name in ["tabpfn", "desreg"]:
1371
1363
  self.do_xai = False
1372
1364
  self.estimate_ci = False
1373
1365
  elif self.model_name in ["oblique", "ydf"]:
@@ -306,12 +306,29 @@ def auto_train(
306
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  # Identify the column indices for cat_features in X_train
307
307
  if cat_features is None:
308
308
  cat_feature_indices = []
309
- cat_feature_indices = [X_train.columns.get_loc(col) for col in cat_features if
310
- col in X_train.columns]
309
+ else:
310
+ cat_feature_indices = [X_train.columns.get_loc(col) for col in cat_features if
311
+ col in X_train.columns]
311
312
 
312
313
  model = AutoTabPFNRegressor(max_time=600,
313
314
  #categorical_feature_indices=cat_feature_indices,
314
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  ignore_pretraining_limits=True)
316
+ elif model_name == "desreg":
317
+ from desReg.des.DESRegression import DESRegression
318
+
319
+ model_catboost = CatBoostRegressor(**hyperparams, cat_features=cat_features)
320
+ from tabpfn_extensions.post_hoc_ensembles.sklearn_interface import AutoTabPFNRegressor
321
+
322
+ # Identify the column indices for cat_features in X_train
323
+ if cat_features is None:
324
+ cat_feature_indices = []
325
+ else:
326
+ cat_feature_indices = [X_train.columns.get_loc(col) for col in cat_features if
327
+ col in X_train.columns]
328
+ model_tabpfn = AutoTabPFNRegressor(max_time=600,
329
+ # categorical_feature_indices=cat_feature_indices,
330
+ ignore_pretraining_limits=True)
331
+ model = DESRegression(regressors_list=[model_catboost, model_tabpfn])
315
332
  elif model_name == "ngboost":
316
333
  if model_type == "REGRESSION":
317
334
  from ngboost import NGBRegressor
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: geocif
3
- Version: 0.2.55
3
+ Version: 0.2.57
4
4
  Summary: Models to visualize and forecast crop conditions and yields
5
5
  Home-page: https://ritviksahajpal.github.io/yield_forecasting/
6
6
  Author: Ritvik Sahajpal
@@ -50,6 +50,6 @@ setup(
50
50
  test_suite="tests",
51
51
  tests_require=test_requirements,
52
52
  url="https://ritviksahajpal.github.io/yield_forecasting/",
53
- version="0.2.55",
53
+ version="0.2.57",
54
54
  zip_safe=False,
55
55
  )
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