geocif 0.2.35__tar.gz → 0.2.37__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (87) hide show
  1. {geocif-0.2.35/geocif.egg-info → geocif-0.2.37}/PKG-INFO +1 -1
  2. {geocif-0.2.35 → geocif-0.2.37}/geocif/geocif.py +10 -2
  3. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/correlations.py +1 -0
  4. {geocif-0.2.35 → geocif-0.2.37/geocif.egg-info}/PKG-INFO +1 -1
  5. {geocif-0.2.35 → geocif-0.2.37}/setup.py +1 -1
  6. {geocif-0.2.35 → geocif-0.2.37}/LICENSE +0 -0
  7. {geocif-0.2.35 → geocif-0.2.37}/MANIFEST.in +0 -0
  8. {geocif-0.2.35 → geocif-0.2.37}/README.md +0 -0
  9. {geocif-0.2.35 → geocif-0.2.37}/geocif/__init__.py +0 -0
  10. {geocif-0.2.35 → geocif-0.2.37}/geocif/agmet/__init__.py +0 -0
  11. {geocif-0.2.35 → geocif-0.2.37}/geocif/agmet/geoagmet.py +0 -0
  12. {geocif-0.2.35 → geocif-0.2.37}/geocif/agmet/plot.py +0 -0
  13. {geocif-0.2.35 → geocif-0.2.37}/geocif/agmet/utils.py +0 -0
  14. {geocif-0.2.35 → geocif-0.2.37}/geocif/analysis.py +0 -0
  15. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/__init__.py +0 -0
  16. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/constants.py +0 -0
  17. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/features.py +0 -0
  18. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/geo.py +0 -0
  19. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/geocif.py +0 -0
  20. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/metadata.py +0 -0
  21. {geocif-0.2.35 → geocif-0.2.37}/geocif/backup/models.py +0 -0
  22. {geocif-0.2.35 → geocif-0.2.37}/geocif/cei/__init__.py +0 -0
  23. {geocif-0.2.35 → geocif-0.2.37}/geocif/cei/definitions.py +0 -0
  24. {geocif-0.2.35 → geocif-0.2.37}/geocif/cei/indices.py +0 -0
  25. {geocif-0.2.35 → geocif-0.2.37}/geocif/experiments.py +0 -0
  26. {geocif-0.2.35 → geocif-0.2.37}/geocif/geocif_runner.py +0 -0
  27. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner.py +0 -0
  28. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_angola.py +0 -0
  29. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_madagascar.py +0 -0
  30. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_malawi.py +0 -0
  31. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_mozambique.py +0 -0
  32. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_south_africa.py +0 -0
  33. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_zambia.py +0 -0
  34. {geocif-0.2.35 → geocif-0.2.37}/geocif/indices_runner_zimbabwe.py +0 -0
  35. {geocif-0.2.35 → geocif-0.2.37}/geocif/logger.py +0 -0
  36. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/__init__.py +0 -0
  37. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/embedding.py +0 -0
  38. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/feature_engineering.py +0 -0
  39. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/feature_selection.py +0 -0
  40. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/outliers.py +0 -0
  41. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/outlook.py +0 -0
  42. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/output.py +0 -0
  43. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/spatial_autocorrelation.py +0 -0
  44. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/stages.py +0 -0
  45. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/stats.py +0 -0
  46. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/trainers.py +0 -0
  47. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/trend.py +0 -0
  48. {geocif-0.2.35 → geocif-0.2.37}/geocif/ml/xai.py +0 -0
  49. {geocif-0.2.35 → geocif-0.2.37}/geocif/mm.py +0 -0
  50. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/__init__.py +0 -0
  51. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/aa.py +0 -0
  52. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/area.py +0 -0
  53. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/automl.py +0 -0
  54. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/download_esi.py +0 -0
  55. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/enso.py +0 -0
  56. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/eval.py +0 -0
  57. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/gamtest.py +0 -0
  58. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/gee_access.py +0 -0
  59. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/misc.py +0 -0
  60. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/play_xagg.py +0 -0
  61. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/reg.py +0 -0
  62. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/sustain.py +0 -0
  63. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/test_catboost.py +0 -0
  64. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/tmp.py +0 -0
  65. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/tmp2.py +0 -0
  66. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/tmp3.py +0 -0
  67. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/tmp4.py +0 -0
  68. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/tmp5.py +0 -0
  69. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/wolayita.py +0 -0
  70. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/wolayita_maize_mask.py +0 -0
  71. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/wolayita_v2.py +0 -0
  72. {geocif-0.2.35 → geocif-0.2.37}/geocif/playground/wolayita_v3.py +0 -0
  73. {geocif-0.2.35 → geocif-0.2.37}/geocif/risk/__init__.py +0 -0
  74. {geocif-0.2.35 → geocif-0.2.37}/geocif/risk/impact_assessment.py +0 -0
  75. {geocif-0.2.35 → geocif-0.2.37}/geocif/utils.py +0 -0
  76. {geocif-0.2.35 → geocif-0.2.37}/geocif/viz/__init__.py +0 -0
  77. {geocif-0.2.35 → geocif-0.2.37}/geocif/viz/gt.py +0 -0
  78. {geocif-0.2.35 → geocif-0.2.37}/geocif/viz/plot.py +0 -0
  79. {geocif-0.2.35 → geocif-0.2.37}/geocif/viz/tmp.py +0 -0
  80. {geocif-0.2.35 → geocif-0.2.37}/geocif/viz/viz_ml.py +0 -0
  81. {geocif-0.2.35 → geocif-0.2.37}/geocif.egg-info/SOURCES.txt +0 -0
  82. {geocif-0.2.35 → geocif-0.2.37}/geocif.egg-info/dependency_links.txt +0 -0
  83. {geocif-0.2.35 → geocif-0.2.37}/geocif.egg-info/not-zip-safe +0 -0
  84. {geocif-0.2.35 → geocif-0.2.37}/geocif.egg-info/top_level.txt +0 -0
  85. {geocif-0.2.35 → geocif-0.2.37}/requirements.txt +0 -0
  86. {geocif-0.2.35 → geocif-0.2.37}/setup.cfg +0 -0
  87. {geocif-0.2.35 → geocif-0.2.37}/tests/test_geocif.py +0 -0
{geocif-0.2.35/geocif.egg-info → geocif-0.2.37}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: geocif
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- Version: 0.2.35
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+ Version: 0.2.37
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  Summary: Models to visualize and forecast crop conditions and yields
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  Home-page: https://ritviksahajpal.github.io/yield_forecasting/
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  Author: Ritvik Sahajpal
{geocif-0.2.35 → geocif-0.2.37}/geocif/geocif.py RENAMED
@@ -831,8 +831,16 @@ class Geocif:
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  df_region_train = df_region_train.dropna(subset=[self.target_column])
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  self.X_train = df_region_train[self.feature_names]
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- # Drop any columns with NaNs
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- self.X_train.dropna(axis=1, how="any", inplace=True)
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+ # Drop any columns with NaNs except the lag yield columns
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+ lag_prefix = "t -"
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+ lag_cols = [
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+ col for col in self.X_train.columns
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+ if col.startswith(lag_prefix) and self.target in col
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+ ]
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+
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+ cols_with_na = self.X_train.columns[self.X_train.isna().any()]
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+ cols_to_check = [col for col in cols_with_na if col not in lag_cols]
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+ self.X_train.dropna(axis=1, how="any", subset=cols_to_check, inplace=True)
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  self.y_train = df_region_train[self.target_column]
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  self.apply_feature_selector(region, dir_output)
{geocif-0.2.35 → geocif-0.2.37}/geocif/ml/correlations.py RENAMED
@@ -199,6 +199,7 @@ def _all_correlated_feature_by_time(df, **kwargs):
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  # Only select columns that have been observed till the current stage
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  pbar = tqdm(stages_features, total=len(stages_features), leave=False)
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+
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  for stage in pbar:
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  pbar.set_description(f"Calculating correlations")
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  pbar.update()
{geocif-0.2.35 → geocif-0.2.37/geocif.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: geocif
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- Version: 0.2.35
3
+ Version: 0.2.37
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  Summary: Models to visualize and forecast crop conditions and yields
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  Home-page: https://ritviksahajpal.github.io/yield_forecasting/
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  Author: Ritvik Sahajpal
{geocif-0.2.35 → geocif-0.2.37}/setup.py RENAMED
@@ -50,6 +50,6 @@ setup(
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  test_suite="tests",
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  tests_require=test_requirements,
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  url="https://ritviksahajpal.github.io/yield_forecasting/",
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- version="0.2.35",
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+ version="0.2.37",
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  zip_safe=False,
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  )
{geocif-0.2.35 → geocif-0.2.37}/LICENSE RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/MANIFEST.in RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/README.md RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/__init__.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/agmet/plot.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/agmet/utils.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/analysis.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/cei/__init__.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/cei/indices.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/experiments.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/geocif_runner.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/logger.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/ml/stages.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/ml/xai.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/playground/aa.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/risk/__init__.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/utils.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/viz/gt.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/viz/plot.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/viz/tmp.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/geocif/viz/viz_ml.py RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/requirements.txt RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/setup.cfg RENAMED
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{geocif-0.2.35 → geocif-0.2.37}/tests/test_geocif.py RENAMED
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