geny-memory-adaptor 0.1.0__tar.gz

geny_memory_adaptor-0.1.0/.github/workflows/ci.yml

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+name: CI — geny-memory-adaptor (library)
+
+on:
+  workflow_dispatch:
+  push:
+    branches: [main]
+    paths:
+      - "src/**"
+      - "tests/**"
+      - "pyproject.toml"
+  pull_request:
+    branches: [main]
+
+concurrency:
+  group: ci-lib-${{ github.ref }}
+  cancel-in-progress: true
+
+permissions:
+  contents: read
+
+jobs:
+  lint:
+    name: Lint
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Install dependencies
+        run: pip install ruff
+
+      - name: Run ruff check
+        run: ruff check src/ tests/
+
+      - name: Run ruff format check
+        run: ruff format --check src/ tests/
+
+  type-check:
+    name: Type check (mypy beachhead)
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install -e ".[dev]"
+
+      # Typed-surface beachhead: the package ships `py.typed`, so the
+      # surfaces hosts import against (core/ + llm_client/) are gated.
+      # Config lives in [tool.mypy] in pyproject.toml — widen the package
+      # list there as more modules come clean.
+      - name: Run mypy (core + llm_client)
+        run: mypy src/geny_executor/core src/geny_executor/llm_client
+
+      # docs/events.md is generated from the EventTypes catalogue; fail
+      # if an event landed without regenerating the doc.
+      - name: Check docs/events.md is current
+        run: python scripts/gen_event_docs.py --check
+
+  test:
+    name: Test (Python ${{ matrix.python-version }})
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.11", "3.12", "3.13"]
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install -e ".[dev]"
+
+      # Full suite — tests/ also contains llm_client/, contract/ and
+      # completeness/ beyond unit/ + integration/; running per-directory
+      # subsets silently skipped them on 3.12/3.13 (audit 2026-06-09 §completeness).
+      - name: Run full test suite
+        if: matrix.python-version != '3.11'
+        run: pytest --tb=short -q
+
+      - name: Run full test suite with coverage
+        if: matrix.python-version == '3.11'
+        run: pytest tests/ --cov=geny_executor --cov-report=term-missing --cov-report=xml
+
+      - name: Upload coverage
+        if: matrix.python-version == '3.11'
+        uses: actions/upload-artifact@v4
+        with:
+          name: coverage-report
+          path: coverage.xml
+
+  security-audit:
+    name: Security audit
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.12"
+      - run: pip install --upgrade pip && pip install pip-audit
+      - run: pip install -e .
+      # CVE-2026-3219 affects pip 26.x itself; the CI runner installs an
+      # affected pip and there is no fix release as of this commit.
+      # Ignore the single CVE so the audit keeps catching real issues
+      # in our dependency tree. Revisit once pip ships a fix.
+      - run: pip-audit --ignore-vuln CVE-2026-3219
+
+  build:
+    name: Build package
+    runs-on: ubuntu-latest
+    needs: [lint, type-check, test, security-audit]
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Install build tools
+        run: pip install build
+
+      - name: Build sdist and wheel
+        run: python -m build
+
+      - name: Check package metadata
+        run: |
+          pip install twine
+          twine check dist/*
+
+      - name: Upload build artifacts
+        uses: actions/upload-artifact@v4
+        with:
+          name: dist
+          path: dist/

geny_memory_adaptor-0.1.0/.github/workflows/publish.yml

@@ -0,0 +1,139 @@
+name: Publish to PyPI
+
+on:
+  release:
+    types: [published]
+  workflow_dispatch:
+    inputs:
+      target:
+        description: "Publish target"
+        required: true
+        default: "testpypi"
+        type: choice
+        options:
+          - testpypi
+          - pypi
+
+permissions:
+  contents: read
+
+jobs:
+  build:
+    name: Build package
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      # Release gate: every published version must have a CHANGELOG
+      # section. 2.1.0 shipped without one (audit 2026-06-09 §3.7) and
+      # became the version a host pinned with no record of what it
+      # contained — this step makes that mistake impossible to repeat.
+      - name: Release gate — CHANGELOG entry for this version
+        run: |
+          python - <<'EOF'
+          import re
+          import sys
+          import tomllib
+
+          with open("pyproject.toml", "rb") as f:
+              version = tomllib.load(f)["project"]["version"]
+          with open("CHANGELOG.md", encoding="utf-8") as f:
+              changelog = f.read()
+
+          # Match '## [<version>]' at line start; separator after the
+          # bracket (em-dash / hyphen / nothing) is intentionally free.
+          if not re.search(rf"^## \[{re.escape(version)}\]", changelog, re.MULTILINE):
+              sys.exit(
+                  f"RELEASE GATE FAILED: CHANGELOG.md has no '## [{version}]' "
+                  f"section for pyproject version {version}. Add the entry "
+                  "before publishing."
+              )
+          print(f"Release gate OK: CHANGELOG.md documents [{version}].")
+          EOF
+
+      - name: Install build tools
+        run: pip install build
+
+      - name: Build sdist and wheel
+        run: python -m build
+
+      - name: Check package metadata
+        run: |
+          pip install twine
+          twine check dist/*
+
+      - name: Upload build artifacts
+        uses: actions/upload-artifact@v4
+        with:
+          name: dist
+          path: dist/
+
+  test:
+    name: Verify tests pass
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install -e ".[dev]"
+
+      - name: Run tests
+        run: pytest --tb=short -q
+
+  publish-testpypi:
+    name: Publish to TestPyPI
+    needs: [build, test]
+    if: >-
+      github.event_name == 'release' ||
+      (github.event_name == 'workflow_dispatch' && inputs.target == 'testpypi')
+    runs-on: ubuntu-latest
+    environment:
+      name: testpypi
+      url: https://test.pypi.org/p/geny-memory-adaptor
+    permissions:
+      id-token: write
+    steps:
+      - name: Download build artifacts
+        uses: actions/download-artifact@v4
+        with:
+          name: dist
+          path: dist/
+
+      - name: Publish to TestPyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          repository-url: https://test.pypi.org/legacy/
+
+  publish-pypi:
+    name: Publish to PyPI
+    needs: [build, test]
+    if: >-
+      github.event_name == 'release' ||
+      (github.event_name == 'workflow_dispatch' && inputs.target == 'pypi')
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/p/geny-memory-adaptor
+    permissions:
+      id-token: write
+    steps:
+      - name: Download build artifacts
+        uses: actions/download-artifact@v4
+        with:
+          name: dist
+          path: dist/
+
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1

geny_memory_adaptor-0.1.0/.gitignore

@@ -0,0 +1,11 @@
+__pycache__/
+*.pyc
+dist/
+build/
+*.egg-info/
+.venv/
+*.db
+*.db-wal
+*.db-shm
+*.emb.npz
+.env

geny_memory_adaptor-0.1.0/CHANGELOG.md

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+# Changelog
+
+## [0.1.0] — 2026-07-20
+
+Initial release — the Synapse engine.
+
+- Hybrid retrieval: BM25 (unicode words + char 2/3-grams, Korean-friendly)
+  ∪ local static hash embeddings (65,536×256 fp16), RRF-fused seeds.
+- Graph layer: typed edges (LINK / TAG / KNN / CO-ACCESS) with one
+  Personalized PageRank per type as ranking features; adjacency cached and
+  row-normalized once per mutation.
+- Learning: Hebbian co-access reinforcement with lazy decay; pairwise
+  logistic online SGD ranker (14→16→1 MLP, numpy) behind a safety blend
+  gate (heuristic performance floor); ε-greedy tail exploration.
+- Distillation: fit the embedding table to caller-provided teacher vectors
+  (Adam, geometry-correlation swap gate) — zero API calls ever.
+- One SQLite file (WAL) + fp16 npz table; config via args / GMA_* env / .env.
+- geny-executor duck-typed adapter (SynapseVectorHandle, SynapseRetriever).
+- 17 tests; bench: 0.7 ms/doc indexing, 8.7 ms/query @ 2,000 docs.

geny_memory_adaptor-0.1.0/LICENSE

@@ -0,0 +1,202 @@
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geny_memory_adaptor-0.1.0/PKG-INFO

@@ -0,0 +1,147 @@
+Metadata-Version: 2.4
+Name: geny-memory-adaptor
+Version: 0.1.0
+Summary: Synapse — a learnable, lightweight graph-traversal memory engine: BM25 + local static embeddings + typed-edge PageRank + an online-learned ranker, in one SQLite file with zero API calls.
+Project-URL: Homepage, https://github.com/CocoRoF/geny-memory-adaptor
+Project-URL: Repository, https://github.com/CocoRoF/geny-memory-adaptor
+Project-URL: Changelog, https://github.com/CocoRoF/geny-memory-adaptor/blob/main/CHANGELOG.md
+Author: CocoRoF
+License-Expression: Apache-2.0
+License-File: LICENSE
+Keywords: agent,bm25,embeddings,graph,memory,online-learning,pagerank,retrieval
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Developers
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
+Requires-Python: >=3.10
+Requires-Dist: numpy>=1.24
+Provides-Extra: dev
+Requires-Dist: pytest-asyncio>=0.23; extra == 'dev'
+Requires-Dist: pytest>=8; extra == 'dev'
+Requires-Dist: ruff>=0.6; extra == 'dev'
+Description-Content-Type: text/markdown
+
+# geny-memory-adaptor
+
+**Synapse** — a learnable, lightweight graph-traversal memory engine for AI agents.
+
+Semantic search (local static embeddings) **+** keyword search (BM25) **+** graph
+traversal (typed-edge Personalized PageRank), fused by a tiny **online-learned
+ranker** that adapts to how your agent actually uses its memories. Everything
+lives in **one SQLite file**. `numpy` is the only dependency. **Zero API calls,
+zero servers, zero idle cost** — every operation is CPU milliseconds.
+
+```
+pip install geny-memory-adaptor
+```
+
+## Why
+
+Typical agent memory stacks pay an embedding API call per write AND per query,
+need a vector server, and never learn: every ranking weight is a hard-coded
+constant. Synapse inverts all three:
+
+| | typical stack | Synapse |
+|---|---|---|
+| query cost | 1 embedding API call + vector store op | **0 API calls, ~3–9 ms CPU** (500–2,000 docs) |
+| write cost | 1 embedding API call + index rebuild | **~0.3–0.7 ms**, incremental SQLite upserts |
+| infrastructure | vector DB / server | **one .db file** (+ a 32 MB fp16 table) |
+| learning | none | **online, per-event, microseconds** |
+
+## Quick start
+
+```python
+from geny_memory_adaptor import SynapseMemory
+
+mem = SynapseMemory.open("vault/synapse.db")          # or SynapseMemory.from_env()
+
+# Write — idempotent by id. Links/tags feed the graph.
+mem.index("note-1", "리듬게임에서 판정을 읽는 건 손이 먼저다",
+          title="리듬게임 판정", tags=["게임"], links=["note-0"])
+
+# Read — BM25 ∪ cosine seeds → per-type PageRank expansion → learned ranking.
+hits = mem.search("리듬게임 판정", top_k=8)
+for h in hits:
+    print(h.id, round(h.score, 3), h.sources)   # e.g. ['bm25', 'vector', 'graph']
+
+# Learn — tell it which shown memories were actually used.
+mem.feedback(hits[0].query_token, used_ids=["note-1"])
+
+# Optionally distill: if you already have better embeddings lying around
+# (e.g. previously paid-for API vectors), hand them in as teachers…
+mem.index("note-2", "text …", teacher_vec=my_stored_api_embedding)
+mem.distill()   # bounded batch job; swaps the table ONLY if geometry improves
+
+mem.close()
+```
+
+### Configuration
+
+Everything is a constructor argument, an environment variable (`GMA_*`), or a
+`.env` file — in that precedence order:
+
+```python
+from geny_memory_adaptor import SynapseConfig, SynapseMemory
+mem = SynapseMemory(SynapseConfig(path="synapse.db", dim=256, top_k=8))
+# or
+mem = SynapseMemory.from_env(dotenv=".env")   # GMA_PATH, GMA_DIM, GMA_TOP_K, …
+```
+
+## How it works
+
+```
+write  ─ tokenize (words + char 2/3-grams; Korean-friendly, no morphology dep)
+       ─ BM25 postings + local hash embedding (65,536 × 256 fp16 table)
+       ─ typed edges: LINK (explicit) · TAG (IDF-weighted) · KNN (semantic)
+
+query  ─ ① seeds: BM25 top-k ∪ cosine top-k, RRF-fused
+       ─ ② expansion: one Personalized PageRank per edge type
+            (LINK / TAG / KNN / CO-ACCESS) → 4 graph features
+       ─ ③ ranking: 14 features → Linear(14→16) → GELU → Linear(16→1)
+
+learn  ─ Hebbian: memories retrieved together AND both used strengthen a
+         CO-ACCESS edge (lazy decay, no maintenance jobs)
+       ─ ranker: pairwise logistic SGD on used-vs-ignored, with a safety
+         blend gate — the learned score only participates once it BEATS the
+         built-in heuristic on live online AUC (performance floor guarantee)
+       ─ distill: fit the embedding table to caller-provided teacher vectors
+         (closed feedback loop with a geometry-improvement gate)
+```
+
+Design notes:
+
+- **The heuristic floor.** Scoring starts as a fixed hand-tuned linear
+  combination. The MLP's influence (λ) stays 0 until it has ≥100 labelled
+  events *and* a better pairwise win-rate — learning can help, never regress.
+- **Per-type PPR instead of a GNN.** Each edge type gets its own PageRank
+  feature; the ranker learns the type weights implicitly. No differentiable
+  graph machinery, fully interpretable, milliseconds on thousands of nodes.
+- **Derived data only.** The SQLite file is an index, not a store of record —
+  delete it any time and re-`index()` from your source of truth.
+
+## geny-executor integration
+
+`geny_memory_adaptor.executor_adapter` ships duck-typed handles matching
+geny-executor's memory Protocols (no import of geny-executor):
+
+```python
+from geny_memory_adaptor import SynapseMemory, SynapseVectorHandle
+handle = SynapseVectorHandle(SynapseMemory.open("vault/synapse.db"))
+# → FileMemoryProvider(vector_store=handle)  # drop-in local vector layer
+```
+
+## Benchmarks (single CPU core, this repo's `tests/bench.py`)
+
+```
+index : 500 docs 0.32 ms/doc · 2,000 docs 0.71 ms/doc
+search: 500 docs 3.1 ms     · 2,000 docs 8.7 ms
+learn : ambiguous-query demo — mean target rank 7.0 → 2.8 after 80 feedbacks
+distill: 120 pairs, geometry corr 0.975 → 0.983, gate-approved swap, 8.5 s
+```
+
+## License
+
+Apache-2.0