genoxide 0.6.0__tar.gz

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Files changed (110) hide show
  1. genoxide-0.6.0/.gitignore +8 -0
  2. genoxide-0.6.0/AGENTS.md +720 -0
  3. genoxide-0.6.0/CHANGELOG.md +139 -0
  4. genoxide-0.6.0/CONTRIBUTING.md +50 -0
  5. genoxide-0.6.0/Cargo.lock +1205 -0
  6. genoxide-0.6.0/Cargo.toml +62 -0
  7. genoxide-0.6.0/LICENSE-APACHE +202 -0
  8. genoxide-0.6.0/LICENSE-MIT +21 -0
  9. genoxide-0.6.0/PKG-INFO +157 -0
  10. genoxide-0.6.0/README.md +214 -0
  11. genoxide-0.6.0/ROADMAP.md +250 -0
  12. genoxide-0.6.0/benches/hot_paths.rs +168 -0
  13. genoxide-0.6.0/benches/instructions.rs +141 -0
  14. genoxide-0.6.0/docs/cli.md +196 -0
  15. genoxide-0.6.0/examples/asynchronous.rs +70 -0
  16. genoxide-0.6.0/examples/knapsack.rs +89 -0
  17. genoxide-0.6.0/examples/n_queens.rs +58 -0
  18. genoxide-0.6.0/examples/one_max.rs +47 -0
  19. genoxide-0.6.0/examples/rastrigin.rs +64 -0
  20. genoxide-0.6.0/genoxide/__init__.py +1312 -0
  21. genoxide-0.6.0/genoxide/_genoxide.pyi +15 -0
  22. genoxide-0.6.0/genoxide/py.typed +0 -0
  23. genoxide-0.6.0/proptest-regressions/algorithm/de.txt +7 -0
  24. genoxide-0.6.0/proptest-regressions/algorithm/es.txt +7 -0
  25. genoxide-0.6.0/proptest-regressions/algorithm/pso.txt +7 -0
  26. genoxide-0.6.0/proptest-regressions/fitness.txt +7 -0
  27. genoxide-0.6.0/proptest-regressions/multi/pareto.txt +7 -0
  28. genoxide-0.6.0/pyproject.toml +36 -0
  29. genoxide-0.6.0/python/Cargo.lock +463 -0
  30. genoxide-0.6.0/python/Cargo.toml +27 -0
  31. genoxide-0.6.0/python/README.md +135 -0
  32. genoxide-0.6.0/python/examples/knapsack.py +32 -0
  33. genoxide-0.6.0/python/examples/n_queens.py +26 -0
  34. genoxide-0.6.0/python/examples/onemax.py +16 -0
  35. genoxide-0.6.0/python/examples/rastrigin.py +24 -0
  36. genoxide-0.6.0/python/examples/zdt1.py +31 -0
  37. genoxide-0.6.0/python/src/config.rs +230 -0
  38. genoxide-0.6.0/python/src/fitness.rs +357 -0
  39. genoxide-0.6.0/python/src/genes.rs +73 -0
  40. genoxide-0.6.0/python/src/lib.rs +20 -0
  41. genoxide-0.6.0/python/src/operators.rs +397 -0
  42. genoxide-0.6.0/python/src/run.rs +703 -0
  43. genoxide-0.6.0/python/tests/test_genoxide.py +689 -0
  44. genoxide-0.6.0/src/algorithm/cmaes.rs +1548 -0
  45. genoxide-0.6.0/src/algorithm/de.rs +1555 -0
  46. genoxide-0.6.0/src/algorithm/es.rs +831 -0
  47. genoxide-0.6.0/src/algorithm/ga.rs +1302 -0
  48. genoxide-0.6.0/src/algorithm/islands.rs +713 -0
  49. genoxide-0.6.0/src/algorithm/local_search.rs +907 -0
  50. genoxide-0.6.0/src/algorithm/pso.rs +658 -0
  51. genoxide-0.6.0/src/algorithm/steady.rs +318 -0
  52. genoxide-0.6.0/src/algorithm.rs +161 -0
  53. genoxide-0.6.0/src/bin/genoxide/builtin.rs +131 -0
  54. genoxide-0.6.0/src/bin/genoxide/config.rs +340 -0
  55. genoxide-0.6.0/src/bin/genoxide/main.rs +171 -0
  56. genoxide-0.6.0/src/bin/genoxide/operators.rs +409 -0
  57. genoxide-0.6.0/src/bin/genoxide/process.rs +381 -0
  58. genoxide-0.6.0/src/bin/genoxide/run.rs +710 -0
  59. genoxide-0.6.0/src/checkpoint.rs +233 -0
  60. genoxide-0.6.0/src/constraint.rs +169 -0
  61. genoxide-0.6.0/src/engine/asynchronous.rs +447 -0
  62. genoxide-0.6.0/src/engine/stop.rs +308 -0
  63. genoxide-0.6.0/src/engine/trace.rs +53 -0
  64. genoxide-0.6.0/src/engine.rs +728 -0
  65. genoxide-0.6.0/src/error.rs +131 -0
  66. genoxide-0.6.0/src/fitness.rs +418 -0
  67. genoxide-0.6.0/src/genome/adaptive.rs +223 -0
  68. genoxide-0.6.0/src/genome/binary.rs +476 -0
  69. genoxide-0.6.0/src/genome/integer.rs +318 -0
  70. genoxide-0.6.0/src/genome/permutation.rs +230 -0
  71. genoxide-0.6.0/src/genome/real.rs +317 -0
  72. genoxide-0.6.0/src/genome.rs +93 -0
  73. genoxide-0.6.0/src/individual.rs +135 -0
  74. genoxide-0.6.0/src/lib.rs +98 -0
  75. genoxide-0.6.0/src/math.rs +297 -0
  76. genoxide-0.6.0/src/multi/algorithm.rs +62 -0
  77. genoxide-0.6.0/src/multi/archive.rs +252 -0
  78. genoxide-0.6.0/src/multi/breed.rs +170 -0
  79. genoxide-0.6.0/src/multi/engine.rs +496 -0
  80. genoxide-0.6.0/src/multi/indicator.rs +667 -0
  81. genoxide-0.6.0/src/multi/moead.rs +922 -0
  82. genoxide-0.6.0/src/multi/nsga2.rs +792 -0
  83. genoxide-0.6.0/src/multi/nsga3.rs +987 -0
  84. genoxide-0.6.0/src/multi/pareto.rs +488 -0
  85. genoxide-0.6.0/src/multi/problems.rs +1097 -0
  86. genoxide-0.6.0/src/multi/scores.rs +262 -0
  87. genoxide-0.6.0/src/multi/sms_emoa.rs +799 -0
  88. genoxide-0.6.0/src/multi/spea2.rs +802 -0
  89. genoxide-0.6.0/src/multi.rs +35 -0
  90. genoxide-0.6.0/src/observer/hall_of_fame.rs +173 -0
  91. genoxide-0.6.0/src/observer/report.rs +306 -0
  92. genoxide-0.6.0/src/observer/statistics.rs +191 -0
  93. genoxide-0.6.0/src/observer.rs +74 -0
  94. genoxide-0.6.0/src/operator/crossover.rs +522 -0
  95. genoxide-0.6.0/src/operator/mutate.rs +909 -0
  96. genoxide-0.6.0/src/operator/permutation.rs +467 -0
  97. genoxide-0.6.0/src/operator/select.rs +697 -0
  98. genoxide-0.6.0/src/operator.rs +120 -0
  99. genoxide-0.6.0/src/population.rs +278 -0
  100. genoxide-0.6.0/src/prelude.rs +34 -0
  101. genoxide-0.6.0/src/rng.rs +593 -0
  102. genoxide-0.6.0/src/serde_arrays.rs +149 -0
  103. genoxide-0.6.0/tests/algorithms.rs +427 -0
  104. genoxide-0.6.0/tests/asynchronous.rs +437 -0
  105. genoxide-0.6.0/tests/checkpoint.rs +574 -0
  106. genoxide-0.6.0/tests/cli.rs +470 -0
  107. genoxide-0.6.0/tests/engine.rs +509 -0
  108. genoxide-0.6.0/tests/genomes.rs +421 -0
  109. genoxide-0.6.0/tests/multi.rs +452 -0
  110. genoxide-0.6.0/tests/tracing.rs +144 -0
genoxide-0.6.0/.gitignore ADDED
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+ /target
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+ /examples/gpu/target
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+ /examples/gpu/Cargo.lock
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+ /python/target
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+ /python/Cargo.lock
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+ __pycache__/
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+ *.so
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+ *.pyd