genal-python 1.2.2__tar.gz → 1.2.3__tar.gz

{genal_python-1.2.2 → genal_python-1.2.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: genal-python
-Version: 1.2.2
+Version: 1.2.3
 Summary: A python toolkit for polygenic risk scoring and mendelian randomization.
 Author-email: Cyprien Rivier <riviercyprien@gmail.com>
 Requires-Python: >=3.8

{genal_python-1.2.2 → genal_python-1.2.3}/genal/__init__.py

@@ -4,7 +4,7 @@ from .tools import default_config, write_config, set_plink, install_plink, delet
 from .geno_tools import Combine_Geno
 from .constants import CONFIG_DIR
 
-__version__ = "1.2.2"
+__version__ = "1.2.3"
 
 config_path = os.path.join(CONFIG_DIR, "config.json")
 

{genal_python-1.2.2 → genal_python-1.2.3}/genal/geno_tools.py

@@ -242,10 +242,7 @@ def check_int_column(data, int_col):
     """Set the type of the int_col column to Int64 and non-numeric values to NA."""
     nrows = data.shape[0]
     # Remove any non-digit characters, convert to numeric, setting non-numeric to NaN
-    data[int_col] = pd.to_numeric(
-        data[int_col].astype(str).str.replace(r'(\d+)', '', regex=True),
-        errors='coerce'
-    )
+    data[int_col] = pd.to_numeric(data[int_col].astype(str).str.extract('(\d+)', expand=False), errors='coerce')
     # Convert to Int64 which handles NaN values, using round() first to handle floats
     data[int_col] = data[int_col].round().astype('Int64')
     n_nan = data[int_col].isna().sum()

{genal_python-1.2.2 → genal_python-1.2.3}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "flit_core.buildapi"
 
 [project]
 name = "genal-python"  # Updated name for PyPI
-version = "1.2.2"
+version = "1.2.3"
 authors = [{name = "Cyprien Rivier", email = "riviercyprien@gmail.com"}]
 description = "A python toolkit for polygenic risk scoring and mendelian randomization."
 readme = "README.md"