gemmapy 2.0.0__tar.gz → 2.0.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (197) hide show
  1. {gemmapy-2.0.0 → gemmapy-2.0.1}/PKG-INFO +1 -1
  2. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/annotation_value_object.py +1 -1
  3. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy.egg-info/PKG-INFO +1 -1
  4. {gemmapy-2.0.0 → gemmapy-2.0.1}/setup.cfg +1 -1
  5. {gemmapy-2.0.0 → gemmapy-2.0.1}/tests/test_basic.py +1 -5
  6. {gemmapy-2.0.0 → gemmapy-2.0.1}/LICENSE.md +0 -0
  7. {gemmapy-2.0.0 → gemmapy-2.0.1}/README.rst +0 -0
  8. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/__init__.py +0 -0
  9. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/_processors.py +0 -0
  10. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/_subprocessors.py +0 -0
  11. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/_validators.py +0 -0
  12. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/gemmapy_api.py +0 -0
  13. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/__init__.py +0 -0
  14. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/api/__init__.py +0 -0
  15. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/api/default_api.py +0 -0
  16. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/api_client.py +0 -0
  17. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/configuration.py +0 -0
  18. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/__init__.py +0 -0
  19. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/annotation_search_result_value_object.py +0 -0
  20. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/annotation_with_usage_statistics_value_object.py +0 -0
  21. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/api_info_value_object.py +0 -0
  22. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/array_design_value_object.py +0 -0
  23. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/array_design_with_usage_statistics_value_object.py +0 -0
  24. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/audit_event_value_object.py +0 -0
  25. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/bibliographic_reference_value_object.py +0 -0
  26. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/bio_assay_value_object.py +0 -0
  27. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/bio_material_value_object.py +0 -0
  28. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/bio_sequence_value_object.py +0 -0
  29. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/build_info_value_object.py +0 -0
  30. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/category_with_usage_statistics_value_object.py +0 -0
  31. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/cell_level_characteristics_value_object.py +0 -0
  32. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/cell_type_assignment_value_object.py +0 -0
  33. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/characteristic_value_object.py +0 -0
  34. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/citation_value_object.py +0 -0
  35. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/composite_sequence_arg.py +0 -0
  36. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/composite_sequence_value_object.py +0 -0
  37. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/contrast_result_value_object.py +0 -0
  38. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/database_entry_arg.py +0 -0
  39. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/database_entry_value_object.py +0 -0
  40. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset.py +0 -0
  41. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset1.py +0 -0
  42. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset10.py +0 -0
  43. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset11.py +0 -0
  44. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset12.py +0 -0
  45. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset13.py +0 -0
  46. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset14.py +0 -0
  47. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset15.py +0 -0
  48. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset16.py +0 -0
  49. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset17.py +0 -0
  50. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset18.py +0 -0
  51. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset19.py +0 -0
  52. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset2.py +0 -0
  53. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset20.py +0 -0
  54. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset3.py +0 -0
  55. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset4.py +0 -0
  56. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset5.py +0 -0
  57. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset6.py +0 -0
  58. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset7.py +0 -0
  59. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset8.py +0 -0
  60. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset9.py +0 -0
  61. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/dataset_arg.py +0 -0
  62. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/diff_ex_result_set_summary_value_object.py +0 -0
  63. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/differential_expression_analysis_result_by_gene_value_object.py +0 -0
  64. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/differential_expression_analysis_result_set_value_object.py +0 -0
  65. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/differential_expression_analysis_result_value_object.py +0 -0
  66. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/differential_expression_analysis_value_object.py +0 -0
  67. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/experiment_expression_levels_value_object.py +0 -0
  68. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/experimental_factor_value_object.py +0 -0
  69. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/expression_experiment_set_value_object.py +0 -0
  70. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/expression_experiment_sub_set_group_value_object.py +0 -0
  71. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/expression_experiment_sub_set_with_groups_value_object.py +0 -0
  72. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/expression_experiment_subset_with_factor_values_object.py +0 -0
  73. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/expression_experiment_value_object.py +0 -0
  74. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/expression_experiment_with_search_result_value_object.py +0 -0
  75. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/external_database_value_object.py +0 -0
  76. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/factor_value_basic_value_object.py +0 -0
  77. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/factor_value_value_object.py +0 -0
  78. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filter_arg_array_design.py +0 -0
  79. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filter_arg_expression_analysis_result_set.py +0 -0
  80. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filter_arg_expression_experiment.py +0 -0
  81. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filtered_and_inferred_and_paginated_response_data_object_expression_experiment_value_object.py +0 -0
  82. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filtered_and_paginated_response_data_object_array_design_value_object.py +0 -0
  83. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filtered_and_paginated_response_data_object_composite_sequence_value_object.py +0 -0
  84. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filtered_and_paginated_response_data_object_differential_expression_analysis_result_set_value_object.py +0 -0
  85. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filtered_and_paginated_response_data_object_expression_experiment_value_object.py +0 -0
  86. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/filtered_and_paginated_response_data_object_gene_value_object.py +0 -0
  87. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/geeq_value_object.py +0 -0
  88. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene.py +0 -0
  89. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene1.py +0 -0
  90. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene2.py +0 -0
  91. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene3.py +0 -0
  92. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene4.py +0 -0
  93. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene5.py +0 -0
  94. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene6.py +0 -0
  95. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene7.py +0 -0
  96. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene8.py +0 -0
  97. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene9.py +0 -0
  98. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene_arg.py +0 -0
  99. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene_element_expressions_value_object.py +0 -0
  100. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene_ontology_term_value_object.py +0 -0
  101. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene_set_value_object.py +0 -0
  102. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/gene_value_object.py +0 -0
  103. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/measurement_value_object.py +0 -0
  104. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/one_of_search_result_value_object_object_result_object.py +0 -0
  105. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/ontology_term_value_object.py +0 -0
  106. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/paginated_response_data_object_composite_sequence_value_object.py +0 -0
  107. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/paginated_response_data_object_experiment_expression_levels_value_object.py +0 -0
  108. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/paginated_response_data_object_expression_experiment_value_object.py +0 -0
  109. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/paginated_response_data_object_gene_value_object.py +0 -0
  110. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/paginated_results_response_data_object_differential_expression_analysis_result_set_value_object.py +0 -0
  111. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/physical_location_value_object.py +0 -0
  112. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform.py +0 -0
  113. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform1.py +0 -0
  114. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform2.py +0 -0
  115. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform3.py +0 -0
  116. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform4.py +0 -0
  117. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform5.py +0 -0
  118. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/platform_arg.py +0 -0
  119. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/probe.py +0 -0
  120. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/protocol_value_object.py +0 -0
  121. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type.py +0 -0
  122. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type1.py +0 -0
  123. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type2.py +0 -0
  124. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type3.py +0 -0
  125. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type4.py +0 -0
  126. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type5.py +0 -0
  127. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type_arg.py +0 -0
  128. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/quantitation_type_value_object.py +0 -0
  129. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_inferred_and_limited_response_data_object_annotation_with_usage_statistics_value_object.py +0 -0
  130. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_inferred_and_limited_response_data_object_array_design_with_usage_statistics_value_object.py +0 -0
  131. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_inferred_and_limited_response_data_object_category_with_usage_statistics_value_object.py +0 -0
  132. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_inferred_and_paginated_response_data_object_differential_expression_analysis_result_by_gene_value_object.py +0 -0
  133. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_inferred_and_paginated_response_data_object_expression_experiment_with_search_result_value_object.py +0 -0
  134. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_inferred_response_data_object_taxon_with_usage_statistics_value_object.py +0 -0
  135. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/queried_and_filtered_and_paginated_response_data_object_expression_experiment_value_object.py +0 -0
  136. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/query_arg.py +0 -0
  137. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_api_info_value_object.py +0 -0
  138. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_cell_type_assignment_value_object.py +0 -0
  139. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_expression_experiment_sub_set_group_value_object.py +0 -0
  140. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_expression_experiment_sub_set_with_groups_value_object.py +0 -0
  141. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_expression_experiment_value_object.py +0 -0
  142. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_annotation_search_result_value_object.py +0 -0
  143. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_array_design_value_object.py +0 -0
  144. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_bio_assay_value_object.py +0 -0
  145. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_cell_level_characteristics_value_object.py +0 -0
  146. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_differential_expression_analysis_value_object.py +0 -0
  147. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_experiment_expression_levels_value_object.py +0 -0
  148. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_expression_experiment_sub_set_group_value_object.py +0 -0
  149. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_expression_experiment_sub_set_with_groups_value_object.py +0 -0
  150. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_gene_ontology_term_value_object.py +0 -0
  151. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_gene_value_object.py +0 -0
  152. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_physical_location_value_object.py +0 -0
  153. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_list_taxon_value_object.py +0 -0
  154. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_long.py +0 -0
  155. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_set_annotation_value_object.py +0 -0
  156. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_set_quantitation_type_value_object.py +0 -0
  157. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_simple_svd_value_object.py +0 -0
  158. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_data_object_single_cell_dimension_value_object.py +0 -0
  159. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/response_error_object.py +0 -0
  160. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/search_result_type.py +0 -0
  161. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/search_result_value_object_expression_experiment_value_object.py +0 -0
  162. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/search_result_value_object_object.py +0 -0
  163. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/search_results_response_data_object.py +0 -0
  164. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/search_settings_value_object.py +0 -0
  165. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/simple_svd_value_object.py +0 -0
  166. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/single_cell_dimension_value_object.py +0 -0
  167. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/sort_arg_array_design.py +0 -0
  168. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/sort_arg_expression_analysis_result_set.py +0 -0
  169. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/sort_arg_expression_experiment.py +0 -0
  170. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/sort_value_object.py +0 -0
  171. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/statement_value_object.py +0 -0
  172. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon.py +0 -0
  173. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon1.py +0 -0
  174. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon10.py +0 -0
  175. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon11.py +0 -0
  176. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon12.py +0 -0
  177. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon2.py +0 -0
  178. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon3.py +0 -0
  179. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon4.py +0 -0
  180. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon5.py +0 -0
  181. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon6.py +0 -0
  182. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon7.py +0 -0
  183. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon8.py +0 -0
  184. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon9.py +0 -0
  185. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon_arg.py +0 -0
  186. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon_value_object.py +0 -0
  187. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/taxon_with_usage_statistics_value_object.py +0 -0
  188. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/vector_element_value_object.py +0 -0
  189. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/well_composed_error.py +0 -0
  190. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/well_composed_error_body.py +0 -0
  191. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/well_composed_warning.py +0 -0
  192. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/rest.py +0 -0
  193. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy.egg-info/SOURCES.txt +0 -0
  194. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy.egg-info/dependency_links.txt +0 -0
  195. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy.egg-info/requires.txt +0 -0
  196. {gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy.egg-info/top_level.txt +0 -0
  197. {gemmapy-2.0.0 → gemmapy-2.0.1}/pyproject.toml +0 -0
{gemmapy-2.0.0 → gemmapy-2.0.1}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: gemmapy
3
- Version: 2.0.0
3
+ Version: 2.0.1
4
4
  Summary: a Python Wrapper for the Gemma API
5
5
  Keywords: gemma,bioinformatics
6
6
  Requires-Python: >3.10
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/models/annotation_value_object.py RENAMED
@@ -195,7 +195,7 @@ class AnnotationValueObject(object):
195
195
  :param evidence_code: The evidence_code of this AnnotationValueObject. # noqa: E501
196
196
  :type: str
197
197
  """
198
- allowed_values = ["IC", "IDA", "IEA", "IEP", "IGI", "IMP", "IPI", "ISS", "NAS", "ND", "RCA", "TAS", "NR", "EXP", "ISA", "ISM", "IGC", "ISO", "IIA", "IBA", "IBD", "IKR", "IRD", "IMR", "IED", "IAGP", "IPM", "QTM", "HDA", "HEP", "HGI", "HMP", "HTP", "OTHER"] # noqa: E501
198
+ allowed_values = ["", "IC", "IDA", "IEA", "IEP", "IGI", "IMP", "IPI", "ISS", "NAS", "ND", "RCA", "TAS", "NR", "EXP", "ISA", "ISM", "IGC", "ISO", "IIA", "IBA", "IBD", "IKR", "IRD", "IMR", "IED", "IAGP", "IPM", "QTM", "HDA", "HEP", "HGI", "HMP", "HTP", "OTHER"] # noqa: E501
199
199
  if evidence_code not in allowed_values:
200
200
  raise ValueError(
201
201
  "Invalid value for `evidence_code` ({0}), must be one of {1}" # noqa: E501
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: gemmapy
3
- Version: 2.0.0
3
+ Version: 2.0.1
4
4
  Summary: a Python Wrapper for the Gemma API
5
5
  Keywords: gemma,bioinformatics
6
6
  Requires-Python: >3.10
{gemmapy-2.0.0 → gemmapy-2.0.1}/setup.cfg RENAMED
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = gemmapy
3
- version = 2.0.0
3
+ version = 2.0.1
4
4
  description = a Python Wrapper for the Gemma API
5
5
  long_description = file: README.rst
6
6
  keywords = gemma, bioinformatics
{gemmapy-2.0.0 → gemmapy-2.0.1}/tests/test_basic.py RENAMED
@@ -55,10 +55,6 @@ def test_get_dataset_annotations():
55
55
  assert type(res) is pd.core.frame.DataFrame
56
56
  assert res.shape[1] == 5
57
57
 
58
- def test_get_dataset_design():
59
- res = api._GemmaPy__get_dataset_design('1')
60
- assert type(res) is pd.core.frame.DataFrame
61
-
62
58
  def test_get_dataset_differential_expression_analyses():
63
59
  res = api.get_dataset_differential_expression_analyses(200)
64
60
  assert type(res) is pd.core.frame.DataFrame
@@ -131,4 +127,4 @@ def test_get_dataset_object():
131
127
  # def test_measurements():
132
128
  # dataset = "GSE106"
133
129
  # samples = api.get_dataset_samples(dataset)
134
-
130
+
{gemmapy-2.0.0 → gemmapy-2.0.1}/LICENSE.md RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/README.rst RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/__init__.py RENAMED
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{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/_processors.py RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/_validators.py RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/gemmapy_api.py RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/__init__.py RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/gemmapy/sdk/rest.py RENAMED
File without changes
{gemmapy-2.0.0 → gemmapy-2.0.1}/pyproject.toml RENAMED
File without changes