gammasimtools 0.11.0__tar.gz → 0.13.0__tar.gz

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/CI-docs.yml

@@ -20,7 +20,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: "3.11"
+          python-version: "3.12"
 
       - name: Python dependencies
         run: |

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/CI-integrationtests.yml

@@ -3,10 +3,6 @@ name: CI-integrationtests
 # Integration tests for applications
 
 env:
-  SIMTOOLS_DB_SERVER: ${{ secrets.DB_SERVER }}
-  SIMTOOLS_DB_API_USER: ${{ secrets.DB_API_USER }}
-  SIMTOOLS_DB_API_PW: ${{ secrets.DB_API_PW }}
-  SIMTOOLS_DB_API_PORT: ${{ secrets.DB_API_PORT }}
   SIMTOOLS_SIMTEL_PATH: "/workdir/sim_telarray/"
 
 on:
@@ -43,6 +39,19 @@ jobs:
     container:
       image: ghcr.io/gammasim/simtools-dev:latest
       options: --user 0
+
+    services:
+      mongodb:
+        image: mongo:latest
+        env:
+          MONGO_INITDB_ROOT_USERNAME: api
+          MONGO_INITDB_ROOT_PASSWORD: password
+        options: >-
+          --health-cmd "mongosh --host localhost --port 27017 -u api -p password --authenticationDatabase admin --eval 'db.runCommand({ ping: 1 })'"
+          --health-interval 10s
+          --health-timeout 5s
+          --health-retries 5
+
     strategy:
       fail-fast: false
       matrix:
@@ -67,11 +76,29 @@ jobs:
           SIMTOOLS_DB_SIMULATION_MODEL="${SIMTOOLS_DB_SIMULATION_MODEL//\'/}"
           echo "SIMTOOLS_DB_SIMULATION_MODEL=$SIMTOOLS_DB_SIMULATION_MODEL" >> "$GITHUB_ENV"
 
+      - name: Create environment file
+        run: |
+          {
+            echo "SIMTOOLS_DB_SERVER=mongodb"
+            echo "SIMTOOLS_DB_API_USER=api"
+            echo "SIMTOOLS_DB_API_PW=password"
+            echo "SIMTOOLS_DB_API_PORT=27017"
+            echo "SIMTOOLS_DB_SIMULATION_MODEL=${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}"
+          } > .env
+
+      - name: Upload data to MongoDB
+        run: |
+          source /workdir/env/bin/activate
+          pip install --no-cache-dir -e '.[tests,dev,doc]'
+          cd database_scripts/
+          ./upload_from_model_repository_to_db.sh ${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}
+
       - name: Run integration tests
         shell: bash -l {0}
         env:
           SIMTOOLS_DB_SIMULATION_MODEL: ${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}
+          SIMTOOLS_DB_SERVER: mongodb
         run: |
           source /workdir/env/bin/activate
-          pip install -e '.[tests,dev,doc]'
-          pytest --model_version=${{ matrix.type }} --color=yes --durations=20 -n auto --dist loadscope --no-cov tests/integration_tests/
+          pip install --no-cache-dir -e '.[tests,dev,doc]'
+          pytest --model_version=${{ matrix.type }} --color=yes --durations=20 -n 4 --dist loadscope --no-cov tests/integration_tests/

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/CI-linter.yml

@@ -32,7 +32,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: "3.11"
+          python-version: "3.12"
 
 
       - name: Check for non-ASCII characters

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/CI-schema-validation.yml

@@ -28,7 +28,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: "3.11"
+          python-version: "3.12"
 
       - name: Installation
         run: |

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/CI-software-update.yml

@@ -17,7 +17,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: "3.11"
+          python-version: "3.12"
 
       - name: Install packages (as pre-commit is running on all files after autoupdate)
         run: |

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/CI-unittests.yml

@@ -3,10 +3,10 @@ name: CI-unittests
 # Execute unit tests
 # (includes CTAO-DPPS-SonarQube)
 env:
-  SIMTOOLS_DB_SERVER: ${{ secrets.DB_SERVER }}
-  SIMTOOLS_DB_API_USER: ${{ secrets.DB_API_USER }}
-  SIMTOOLS_DB_API_PW: ${{ secrets.DB_API_PW }}
-  SIMTOOLS_DB_API_PORT: ${{ secrets.DB_API_PORT }}
+  SIMTOOLS_DB_SERVER: localhost
+  SIMTOOLS_DB_API_USER: api
+  SIMTOOLS_DB_API_PW: password
+  SIMTOOLS_DB_API_PORT: 27017
   SONAR_HOST_URL: ${{ secrets.SONAR_HOST_URL }}
 
 on:
@@ -17,29 +17,42 @@ on:
     - cron: "0 0 * * *"
 
 jobs:
-
   unittests:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
         include:
-          - os: macos-latest
+          - os: ubuntu-latest
             python-version: "3.11"
             install-method: mamba
 
           - os: ubuntu-latest
-            python-version: "3.11"
+            python-version: "3.12"
             install-method: mamba
             extra-args: ["codecov", "random-order"]
 
           - os: ubuntu-latest
-            python-version: "3.11"
+            python-version: "3.12"
             install-method: pip
 
           - os: ubuntu-latest
-            python-version: "3.12"
+            python-version: "3.13"
             install-method: mamba
 
+    services:
+      mongodb:
+        image: mongo:latest
+        env:
+          MONGO_INITDB_ROOT_USERNAME: api
+          MONGO_INITDB_ROOT_PASSWORD: password
+        ports:
+          - 27017:27017
+        options: >-
+          --health-cmd "mongosh --host localhost --port 27017 -u api -p password --authenticationDatabase admin --eval 'db.runCommand({ ping: 1 })'"
+          --health-interval 10s
+          --health-timeout 5s
+          --health-retries 5
+
     defaults:
       run:
         shell: bash -leo pipefail {0}
@@ -60,7 +73,6 @@ jobs:
         env:
           PYTHON_VERSION: ${{ matrix.python-version }}
         run: |
-          # setup correct python version
           sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml
 
       - name: Install mamba dependencies
@@ -78,12 +90,6 @@ jobs:
           python-version: ${{ matrix.python-version }}
           check-latest: true
 
-      - if: ${{ matrix.install-method == 'pip' && runner.os == 'macOS' }}
-        name: Fix Python PATH on macOS
-        # from https://github.com/cta-observatory/ctapipe/blob/cfacbe1eeb2d9a4634980e5f1ef39b944bca6a7a/.github/workflows/ci.yml#L100
-        run: |
-          tee -a "$HOME/.bash_profile" <<< "export PATH=$pythonLocation/bin:$PATH"
-
       - name: Python dependencies (pip)
         if: matrix.install-method == 'pip'
         run: |
@@ -100,12 +106,17 @@ jobs:
           SIMTOOLS_DB_SIMULATION_MODEL="${SIMTOOLS_DB_SIMULATION_MODEL//\'/}"
           echo "SIMTOOLS_DB_SIMULATION_MODEL=$SIMTOOLS_DB_SIMULATION_MODEL" >> "$GITHUB_ENV"
 
+      - name: Upload data to MongoDB
+        run: |
+          cd database_scripts/
+          ./upload_from_model_repository_to_db.sh ${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}
+
       - name: Unit tests
         shell: bash -l {0}
         env:
           SIMTOOLS_DB_SIMULATION_MODEL: ${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}
         run: |
-          pytest --durations=10 --color=yes -n auto --dist loadscope \
+          pytest --durations=10 --color=yes -n 4 --dist loadscope \
             --cov=simtools --cov-report=xml
 
       # CTAO-DPPS-SonarQube
@@ -120,7 +131,7 @@ jobs:
         env:
           SIMTOOLS_DB_SIMULATION_MODEL: ${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}
         run: |
-          pytest --color=yes -n auto --dist loadscope --count 5 --random-order
+          pytest --color=yes -n 4 --dist loadscope --count 5 --random-order
 
       - name: Upload coverage report to codecov
         uses: codecov/codecov-action@v5

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/build-docker-corsika-simtelarray-image.yml

@@ -1,6 +1,7 @@
 ---
 name: docker-corsika-simtelarray
 # Build and push vanilla CORSIKA / sim_telarray image and simtools-prod images for different CPU architectures.
+# Integration tests are running on the non-optimized ('no_opt') image.
 
 on:
   workflow_dispatch:
@@ -14,6 +15,10 @@ on:
     - cron: '0 0 * * 0'  # Every Sunday at 00:00 UTC (build only)
 
 env:
+  SIMTOOLS_DB_SERVER: ${{ secrets.DB_SERVER }}
+  SIMTOOLS_DB_API_USER: ${{ secrets.DB_READ_USER }}
+  SIMTOOLS_DB_API_PW: ${{ secrets.DB_READ_PW }}
+  SIMTOOLS_DB_API_PORT: ${{ secrets.DB_API_PORT }}
   REGISTRY: ghcr.io
   IMAGE_NAME: ${{ github.repository }}
   CLOUD_URL: "https://syncandshare.desy.de/index.php/s/"
@@ -139,7 +144,7 @@ jobs:
           - {build_opt: 'prod6-baseline', extra_def: ''}
           # - {build_opt: 'prod5', extra_def: ''}
           # - {build_opt: 'prod5-sc', extra_def: ''}
-        avx_instruction: ['avx2', 'noOpt']
+        avx_instruction: ['avx2', 'no_opt']
         # avx_instruction: ['avx2', 'avx512f', 'sse4', 'avx']
 
     env:
@@ -184,7 +189,7 @@ jobs:
             type=semver,pattern={{major}}.{{minor}}.{{patch}}
             type=schedule,pattern={{date 'YYYYMMDD'}}
             type=raw,value={{date 'YYYYMMDD-HHmmss'}}
-          images: ${{ env.REGISTRY }}/gammasim/simtools-prod-opt-${{ env.LABELS }}
+          images: ${{ env.REGISTRY }}/gammasim/simtools-prod-${{ env.LABELS }}
           flavor: latest=true
 
       - name: Build and push optimized image
@@ -204,4 +209,53 @@ jobs:
             ${{ github.event_name == 'release' || github.event.pull_request.merged == true || github.event_name == 'workflow_dispatch' }}
           file: ./docker/Dockerfile-prod-opt
           tags: ${{ steps.meta.outputs.tags }}
-          labels: ${{ steps.meta.outputs.labels }}-prod-opt
+          labels: ${{ steps.meta.outputs.labels }}-prod
+      - name: set image tag
+        run: |
+            echo "image_tag=$(echo '${{ steps.meta.outputs.tags }}' | head -n1)" >> "$GITHUB_ENV"
+        id: set-image-tag
+    outputs:
+      image_tag: ${{ steps.meta.outputs.tags }}
+
+  test-images:
+    runs-on: ubuntu-latest
+    needs: build-production-images-optimized
+    strategy:
+      matrix:
+        version:
+          - {simtel_version: '240205', corsika_version: '77500', bernlohr_version: '1.67'}
+          # - {simtel_version: '240927', corsika_version: '77550', bernlohr_version: '1.68'}
+        hadronic_model: ['qgs2']
+        production:
+          - {build_opt: 'prod6-sc', extra_def: '-DMAXIMUM_TELESCOPES=128'}
+          - {build_opt: 'prod6-baseline', extra_def: ''}
+        avx_instruction: ['no_opt']
+    container:
+      image: ghcr.io/gammasim/simtools-prod-${{ matrix.version.simtel_version }}-corsika-${{ matrix.version.corsika_version }}-bernlohr-${{ matrix.version.bernlohr_version }}-${{ matrix.production.build_opt }}-${{ matrix.hadronic_model }}-${{ matrix.avx_instruction }}
+      env:
+        SIMTOOLS_SIMTEL_PATH: "/workdir/sim_telarray"
+        SIMTOOLS_DB_API_PORT: ${{ env.SIMTOOLS_DB_API_PORT }}
+        SIMTOOLS_DB_API_USER: ${{ env.SIMTOOLS_DB_API_USER }}
+        SIMTOOLS_DB_API_PW: ${{ env.SIMTOOLS_DB_API_PW }}
+        SIMTOOLS_DB_SERVER: ${{ env.SIMTOOLS_DB_SERVER }}
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v4
+
+      - name: Set sim_telarray path
+        run: |
+          echo "PATH=\$PATH:/usr/bin:/usr/local/bin:$SIMTOOLS_SIMTEL_PATH" >> "$GITHUB_ENV"
+
+      - name: Extract SIMTOOLS_DB_SIMULATION_MODEL
+        run: |
+          SIMTOOLS_DB_SIMULATION_MODEL=$(grep 'SIMTOOLS_DB_SIMULATION_MODEL=' .env_template | cut -d '=' -f2- | tr -d '"')
+          SIMTOOLS_DB_SIMULATION_MODEL="${SIMTOOLS_DB_SIMULATION_MODEL//\'/}"
+          echo "SIMTOOLS_DB_SIMULATION_MODEL=$SIMTOOLS_DB_SIMULATION_MODEL" >> "$GITHUB_ENV"
+
+      - name: Run integration tests
+        env:
+          SIMTOOLS_DB_SIMULATION_MODEL: ${{ env.SIMTOOLS_DB_SIMULATION_MODEL }}
+        run: |
+          source /workdir/env/bin/activate
+          pip install --no-cache-dir pytest pytest-cov pytest-requirements pytest-xdist
+          pytest --no-cov --color=yes -n auto tests/integration_tests/test_applications_from_config.py

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.github/workflows/pypi.yml

@@ -22,7 +22,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v5
         with:
-          python-version: "3.11"
+          python-version: "3.12"
 
       - name: Install dependencies
         run: |

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/.pre-commit-config.yaml

@@ -65,7 +65,7 @@ repos:
       [
         "--strict",
         "-d",
-        '{extends: default, rules: {line-length: {max: 250}, indentation: {spaces: 2, indent-sequences: consistent}, truthy: {allowed-values: ["true", "false", "on", "off"]}}}'
+        '{extends: default, rules: {line-length: {max: 300}, indentation: {spaces: 2, indent-sequences: consistent}, truthy: {allowed-values: ["true", "false", "on", "off"]}}}'
       ]
 # towncrier
 - repo: https://github.com/twisted/towncrier

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/CHANGELOG.md

@@ -7,6 +7,38 @@ This changelog is generated using [Towncrier](https://towncrier.readthedocs.io/)
 
 <!-- towncrier release notes start -->
 
+## [0.13.0](https://github.com/gammasim/simtools/tree/0.13.0) - 2025-03-19
+
+### Bugfixes
+
+- Fix `null` values in YAML-style model parameter schema files. ([#1437](https://github.com/gammasim/simtools/pull/1437))
+
+### New Features
+
+- Improvements for single pe setting workflow including plotting and metadata handling. ([#1398](https://github.com/gammasim/simtools/pull/1398))
+- Add an application that allows to extract array and shower data and to save them in hdf5 format for the later calculation of production configuration limits. ([#1402](https://github.com/gammasim/simtools/pull/1402))
+- Add integration tests to production image generation. ([#1420](https://github.com/gammasim/simtools/pull/1420))
+- Improve reading of single parameter and files from database. Add plotting of tabular data using `parameter_version`. ([#1426](https://github.com/gammasim/simtools/pull/1426))
+- Improved plotting of tabular data; adding error bars and schema validation for plotting configuration. ([#1429](https://github.com/gammasim/simtools/pull/1429))
+- Add function to get all model parameter data for all model versions. ([#1432](https://github.com/gammasim/simtools/pull/1432))
+
+### Maintenance
+
+- Run unit and integration test on database setup in local test environment. ([#1424](https://github.com/gammasim/simtools/pull/1424))
+- Remove tests from pypi package. Remove obsolete `__init__.py` files. ([#1430](https://github.com/gammasim/simtools/pull/1430))
+- Change base python version from 3.11 to 3.12. ([#1433](https://github.com/gammasim/simtools/pull/1433))
+- Update exporting of sim_telarray model to simtools taking into account the updated file naming (included parameter versions). ([#1438](https://github.com/gammasim/simtools/pull/1438))
+- Robust getting of username in metadata collector in case no user is defined on system level. ([#1442](https://github.com/gammasim/simtools/pull/1442))
+
+
+## [0.12.0](https://github.com/gammasim/simtools/tree/0.12.0) - 2025-03-11
+
+### Bugfixes
+
+- Bugfix in database-upload related string to list conversion. ([#1423](https://github.com/gammasim/simtools/pull/1423))
+- Fix setting of `db_api_authentication_database` through env variable. ([#1425](https://github.com/gammasim/simtools/pull/1425))
+
+
 ## [0.11.0](https://github.com/gammasim/simtools/tree/0.11.0) - 2025-03-05
 
 ### Bugfixes

gammasimtools-0.13.0/MANIFEST.in

@@ -0,0 +1,12 @@
+include README.md
+include LICENSE
+include CHANGELOG.md
+include CITATION.cff
+include pyproject.toml
+
+recursive-include src *.py
+recursive-include docs *
+
+prune src/simtools/_dev_version
+prune docs/build
+prune tests/

{gammasimtools-0.11.0/src/gammasimtools.egg-info → gammasimtools-0.13.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: gammasimtools
-Version: 0.11.0
+Version: 0.13.0
 Summary: Tools for the Simulation System of the CTA Observatory
 Author-email: simtools developers <simtools-developer@desy.de>
 License: BSD 3-Clause License

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/database_scripts/upload_from_model_repository_to_db.sh

@@ -4,6 +4,7 @@
 # Execute this scripts from the ./database_scripts directory.
 # Cover 'source .env': the script ensure that this file exists:
 # shellcheck disable=SC1091
+set -e
 
 DB_SIMULATION_MODEL_URL="https://gitlab.cta-observatory.org/cta-science/simulations/simulation-model/simulation-models.git"
 DB_SIMULATION_MODEL_BRANCH="main"
@@ -30,10 +31,14 @@ git clone --depth=1 -b $DB_SIMULATION_MODEL_BRANCH $DB_SIMULATION_MODEL_URL ./tm
 
 CURRENT_DIR=$(pwd)
 cd ./tmp_model_parameters/ || exit
-cp -f "$CURRENT_DIR"/../.env .env
+if [[ -e "$CURRENT_DIR"/../.env ]]; then
+    cp -f "$CURRENT_DIR"/../.env .env
+fi
 
 # ask for confirmation before uploading to remote DB
-source .env
+if [[ -e .env ]]; then
+    source .env
+fi
 regex='^([a-zA-Z0-9-]+\.)+[a-zA-Z]{2,}$'
 echo "DB_SERVER: $SIMTOOLS_DB_SERVER"
 if [[ $SIMTOOLS_DB_SERVER =~ $regex ]]; then
@@ -44,6 +49,11 @@ if [[ $SIMTOOLS_DB_SERVER =~ $regex ]]; then
   fi
 fi
 
+# Print connection details for debugging
+echo "MongoDB connection details:"
+echo "Server: $SIMTOOLS_DB_SERVER"
+echo "Port: $SIMTOOLS_DB_API_PORT"
+
 # upload model parameters to DB
 model_directory="./simulation-models/model_parameters/"
 simtools-db-add-simulation-model-from-repository-to-db \

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/docker/Dockerfile-dev

@@ -5,14 +5,15 @@ ARG CORSIKA_VERSION="77550"
 ARG BERNLOHR_VERSION="1.68"
 FROM ghcr.io/gammasim/simtools-corsika-sim-telarray-${SIMTEL_VERSION}-corsika-${CORSIKA_VERSION}-bernlohr-${BERNLOHR_VERSION}-${BUILD_OPT}-${HADRONIC_MODEL}
 WORKDIR /workdir
+ARG PYTHON_VERSION="3.12"
 
 RUN microdnf update -y && microdnf install -y \
     findutils gcc-c++ git \
-    python3.11-pip python3.11-devel wget && \
+    python${PYTHON_VERSION}-pip python${PYTHON_VERSION}-devel wget && \
     microdnf clean all
 
 RUN wget --quiet https://raw.githubusercontent.com/gammasim/simtools/main/pyproject.toml && \
-    python3.11 -m venv env && \
+    python${PYTHON_VERSION} -m venv env && \
     source env/bin/activate && \
     pip install -U pip && \
     pip install toml-to-requirements && \

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/docker/Dockerfile-prod-opt

@@ -8,6 +8,8 @@ ARG AVX_FLAG="avx2"
 ARG CORSIKA_VERSION="77550"
 ARG BERNLOHR_VERSION="1.68"
 ARG BUILD_BRANCH=main
+ARG PYTHON_VERSION=3.12
+ARG SIMTOOLS_REQUIREMENT="git+https://github.com/gammasim/simtools.git"
 
 RUN yum update -y && yum install -y \
     gcc-fortran gsl-devel libgfortran \
@@ -27,7 +29,7 @@ RUN cd corsika-$CORSIKA_VERSION && \
     if [[ $CORSIKA_VERSION -eq 77550 ]]; then \
         (cd src && patch -b -p0 corsika.F < "../../corsika-77550.patch"); \
     fi && \
-    if [[ "$AVX_FLAG" == "noOpt" ]]; then \
+    if [[ "$AVX_FLAG" == "no_opt" ]]; then \
         ../corsika_build_script $HADRONIC_MODEL generic; \
     else \
         ./corsika_opt_patching.sh && \
@@ -39,10 +41,10 @@ RUN cd corsika-$CORSIKA_VERSION && \
 RUN make -C corsika-$CORSIKA_VERSION clean && rm -f */*.a lib/*/*.a && \
     AVX_EXTRA_FLAG=$([ "$AVX_FLAG" = "avx512f" ] && echo "-ffp-contract=off" || echo "") && \
     CFLAGS="" && CXXFLAGS="" && FFLAGS="" && \
-    if [[ "$AVX_FLAG" == "noOpt" ]]; then \
-        CFLAGS="-g  -std=c99 -O3 -mavx2"; \
-        CXXFLAGS="-g  -std=c99 -O3 -mavx2"; \
-        FFLAGS="-g -ffixed-line-length-132 -fno-automatic -frecord-marker=4 -std=legacy -std=c99 -O3 -mavx2"; \
+    if [[ "$AVX_FLAG" == "no_opt" ]]; then \
+        CFLAGS="-g  -std=c99 -O3"; \
+        CXXFLAGS="-g  -std=c99 -O3"; \
+        FFLAGS="-g -ffixed-line-length-132 -fno-automatic -frecord-marker=4 -std=legacy -std=c99 -O3"; \
     else \
         CFLAGS="-g -DCERENKOPT -DVLIBM -std=c99 -O3 ${AVX_FLAG:+-m$AVX_FLAG} ${avx_512_FLAG} -DVECTOR_SIZE=8 -DVECTOR_LENGTH=8"; \
         CXXFLAGS="-g -DCERENKOPT -DVLIBM -std=c99 -O3 ${AVX_FLAG:+-m$AVX_FLAG} ${avx_512_FLAG} -DVECTOR_SIZE=8 -DVECTOR_LENGTH=8"; \
@@ -83,20 +85,21 @@ RUN echo "build_opt: $BUILD_OPT" > /workdir/sim_telarray/build_opts.yml && \
 FROM almalinux:9.5-minimal
 WORKDIR /workdir
 ARG BUILD_BRANCH=main
+ARG SIMTOOLS_REQUIREMENT="git+https://github.com/gammasim/simtools.git"
+ARG PYTHON_VERSION=3.12
 COPY --from=build_image /workdir/sim_telarray/ /workdir/sim_telarray/
 
 RUN microdnf update -y && microdnf install -y \
     bc findutils gcc-c++ git gsl-devel gcc-fortran libgfortran \
-    procps python3.11-pip zstd && \
+    procps python${PYTHON_VERSION}-devel zstd && \
     microdnf clean all
 
-RUN BUILD_BRANCH=$(echo $BUILD_BRANCH | sed 's#refs/tags/##') && \
-    git clone -b $BUILD_BRANCH https://github.com/gammasim/simtools.git --depth 1 && \
-    python3.11 -m venv env && \
-    source env/bin/activate && \
-    pip install -U pip && \
-    pip install --no-cache-dir ./simtools && \
-    rm -rf simtools
+RUN BUILD_BRANCH=$(echo $BUILD_BRANCH | sed 's#refs/tags/##') \
+  && git clone -b $BUILD_BRANCH https://github.com/gammasim/simtools.git --depth 1 \
+  && python${PYTHON_VERSION} -m venv env \
+  && source env/bin/activate \
+  && pip install -U pip \
+  && pip install --no-cache-dir ${SIMTOOLS_REQUIREMENT}
 
 ENV SIMTEL_PATH="/workdir/sim_telarray/"
 ENV PATH="/workdir/env/bin/:$PATH"

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/docs/source/api-reference/production_configuration.md

@@ -24,6 +24,15 @@ the calculation of the number of events to be simulated given a pre-determined m
    :members:
 ```
 
+(extract-mc-event-data)=
+
+## extract_mc_event_data
+
+```{eval-rst}
+.. automodule:: production_configuration.extract_mc_event_data
+   :members:
+```
+
 (generate-simulation-config)=
 
 ## generate_simulation_config
@@ -42,10 +51,11 @@ the calculation of the number of events to be simulated given a pre-determined m
    :members:
 ```
 
+(derive-corsika-limits)=
 
-## limits_calculation
+## derive_corsika_limits
 
 ```{eval-rst}
-.. automodule:: production_configuration.limits_calculation
+.. automodule:: production_configuration.derive_corsika_limits
    :members:
 ```

gammasimtools-0.13.0/docs/source/user-guide/applications/simtools-production-derive-corsika-limits.rst

@@ -0,0 +1,6 @@
+
+simtools-production-derive-corsika-limits
+=========================================
+
+.. automodule:: production_derive_corsika_limits
+   :members:

gammasimtools-0.13.0/docs/source/user-guide/applications/simtools-production-extract-mc-event-data.rst

@@ -0,0 +1,6 @@
+
+simtools-production-extract-mc-event-data
+=========================================
+
+.. automodule:: production_extract_mc_event_data
+   :members:

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/docs/source/user-guide/applications.md

@@ -41,12 +41,13 @@ simtools-docs-produce-array-element-report <applications/simtools-docs-produce-a
 simtools-docs-produce-model-parameter-reports <applications/simtools-docs-produce-model-parameter-reports>
 simtools-generate-array-config <applications/simtools-generate-array-config>
 simtools-generate-corsika-histograms <applications/simtools-generate-corsika-histograms>
+simtools-production-extract-mc-event-data <applications/simtools-production-extract-mc-event-data>
 simtools-generate-default-metadata <applications/simtools-generate-default-metadata>
 simtools-generate-regular-arrays <applications/simtools-generate-regular-arrays>
 simtools-generate-simtel-array-histograms <applications/simtools-generate-simtel-array-histograms>
 simtools-plot-array-layout <applications/simtools-plot-array-layout>
 simtools-plot-tabular-data <applications/simtools-plot-tabular-data>
-simtools-production-derive-limits <applications/simtools-production-derive-limits>
+simtools-production-derive-corsika-limits <applications/simtools-production-derive-corsika-limits>
 simtools-production-generate-simulation-config <applications/simtools-production-generate-simulation-config>
 simtools-production-scale-events <applications/simtools-production-scale-events>
 simtools-run-application <applications/simtools-run-application>

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/environment.yml

@@ -4,7 +4,7 @@ name: simtools-dev
 channels:
   - conda-forge
 dependencies:
-  - python=3.11
+  - python=3.12
   - astropy-base
   - boost-histogram
   - ctao-dpps-cosmic-ray-spectra

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/pyproject.toml

@@ -93,7 +93,8 @@ scripts.simtools-generate-regular-arrays = "simtools.applications.generate_regul
 scripts.simtools-generate-simtel-array-histograms = "simtools.applications.generate_simtel_array_histograms:main"
 scripts.simtools-plot-array-layout = "simtools.applications.plot_array_layout:main"
 scripts.simtools-plot-tabular-data = "simtools.applications.plot_tabular_data:main"
-scripts.simtools-production-derive-limits = "simtools.applications.production_derive_limits:main"
+scripts.simtools-production-derive-corsika-limits = "simtools.applications.production_derive_corsika_limits:main"
+scripts.simtools-production-extract-mc-event-data = "simtools.applications.production_extract_mc_event_data:main"
 scripts.simtools-production-generate-simulation-config = "simtools.applications.production_generate_simulation_config:main"
 scripts.simtools-production-scale-events = "simtools.applications.production_scale_events:main"
 scripts.simtools-run-application = "simtools.applications.run_application:main"

{gammasimtools-0.11.0 → gammasimtools-0.13.0}/sonar-project.properties

@@ -2,6 +2,6 @@ sonar.projectKey=gammasim_simtools_AY_ssha9WiFxsX-2oy_w
 sonar.host.url=https://sonar-cta-dpps.zeuthen.desy.de
 sonar.qualitygate.wait=true
 sonar.python.coverage.reportPaths=coverage.xml
-sonar.python.version=3.11
+sonar.python.version=3.12
 sonar.exclusions=**/docs/**,src/simtools/applications/*,**__init__.py
 sonar.coverage.exclusions=**/tests/**

{gammasimtools-0.11.0 → gammasimtools-0.13.0/src/gammasimtools.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: gammasimtools
-Version: 0.11.0
+Version: 0.13.0
 Summary: Tools for the Simulation System of the CTA Observatory
 Author-email: simtools developers <simtools-developer@desy.de>
 License: BSD 3-Clause License