galaxy-tool-refactor 0.2.0__tar.gz

galaxy_tool_refactor-0.2.0/.gitignore

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+# Machine-local scratch, never committed: the cloned corpus (.local/corpus,
+# seeded from corpus_sources.json) and external source clones for inspection
+# (e.g. .local/galaxy-src = a clone of galaxyproject/galaxy used to verify
+# Galaxy-internal behaviour locally).
+# No trailing slash: `.local/` matches only a directory, so an accidental
+# symlink at this path was committable (it happened once; removed in this branch).
+.local
+.venv/
+__pycache__/
+*.pyc
+*.pyo
+.pytest_cache/
+.mypy_cache/
+.ruff_cache/
+dist/
+*.egg-info/
+
+# Local-only draft of the GCC poster abstract.
+gcc2026-abstract.txt
+
+# Claude Code session scratch (the tracked .claude/ settings + skills stay; this
+# runtime lock for scheduled wakeups is machine-local).
+.claude/scheduled_tasks.lock
+.claude/worktrees/

galaxy_tool_refactor-0.2.0/PKG-INFO

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+Metadata-Version: 2.4
+Name: galaxy-tool-refactor
+Version: 0.2.0
+Summary: Front-door metapackage for galaxy-tool-refactor: installs the CLI (and, with the [mcp] extra, the MCP server).
+Project-URL: Homepage, https://github.com/richard-burhans/galaxy-tool-refactor
+Project-URL: Repository, https://github.com/richard-burhans/galaxy-tool-refactor
+Project-URL: Changelog, https://github.com/richard-burhans/galaxy-tool-refactor/blob/main/CHANGELOG.md
+Author: Richard Burhans
+License-Expression: MIT
+Keywords: bioinformatics,formatter,galaxy,linter,tool-xml
+Requires-Python: >=3.10
+Requires-Dist: galaxy-tool-refactor-cli==0.2.0
+Provides-Extra: mcp
+Requires-Dist: galaxy-tool-refactor-mcp==0.2.0; extra == 'mcp'
+Description-Content-Type: text/markdown
+
+# galaxy-tool-refactor
+
+Front-door metapackage for the **galaxy-tool-refactor** toolkit — parse, lint,
+format, and structurally upgrade [Galaxy](https://galaxyproject.org/) tool XML.
+
+```bash
+pip install galaxy-tool-refactor          # the galaxy-tool-refactor CLI
+pip install "galaxy-tool-refactor[mcp]"   # + the agent-facing MCP server
+```
+
+This package installs no code of its own; it depends on
+[`galaxy-tool-refactor-cli`](https://pypi.org/project/galaxy-tool-refactor-cli/)
+(which provides the `galaxy-tool-refactor` command) and, via the `[mcp]` extra,
+[`galaxy-tool-refactor-mcp`](https://pypi.org/project/galaxy-tool-refactor-mcp/).
+
+For a minimal install of a single layer, depend on that package directly (e.g.
+`galaxy-tool-source` for parsing/validation). See the
+[project README](https://github.com/richard-burhans/galaxy-tool-refactor) for the
+full package map and architecture.

galaxy_tool_refactor-0.2.0/README.md

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+# galaxy-tool-refactor
+
+Front-door metapackage for the **galaxy-tool-refactor** toolkit — parse, lint,
+format, and structurally upgrade [Galaxy](https://galaxyproject.org/) tool XML.
+
+```bash
+pip install galaxy-tool-refactor          # the galaxy-tool-refactor CLI
+pip install "galaxy-tool-refactor[mcp]"   # + the agent-facing MCP server
+```
+
+This package installs no code of its own; it depends on
+[`galaxy-tool-refactor-cli`](https://pypi.org/project/galaxy-tool-refactor-cli/)
+(which provides the `galaxy-tool-refactor` command) and, via the `[mcp]` extra,
+[`galaxy-tool-refactor-mcp`](https://pypi.org/project/galaxy-tool-refactor-mcp/).
+
+For a minimal install of a single layer, depend on that package directly (e.g.
+`galaxy-tool-source` for parsing/validation). See the
+[project README](https://github.com/richard-burhans/galaxy-tool-refactor) for the
+full package map and architecture.

galaxy_tool_refactor-0.2.0/pyproject.toml

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+[project]
+name = "galaxy-tool-refactor"
+version = "0.2.0"
+description = "Front-door metapackage for galaxy-tool-refactor: installs the CLI (and, with the [mcp] extra, the MCP server)."
+readme = "README.md"
+requires-python = ">=3.10"
+license = "MIT"
+authors = [{ name = "Richard Burhans" }]
+keywords = ["galaxy", "bioinformatics", "tool-xml", "linter", "formatter"]
+# The CLI is the front door (it provides the `galaxy-tool-refactor` command).
+dependencies = [
+    "galaxy-tool-refactor-cli==0.2.0",
+]
+
+[project.optional-dependencies]
+# The agent-facing MCP server (pulls the MCP SDK); opt in with
+# `pip install galaxy-tool-refactor[mcp]`.
+mcp = [
+    "galaxy-tool-refactor-mcp==0.2.0",
+]
+
+[project.urls]
+Homepage = "https://github.com/richard-burhans/galaxy-tool-refactor"
+Repository = "https://github.com/richard-burhans/galaxy-tool-refactor"
+Changelog = "https://github.com/richard-burhans/galaxy-tool-refactor/blob/main/CHANGELOG.md"
+
+[build-system]
+requires = ["hatchling"]
+build-backend = "hatchling.build"
+
+# A pure metapackage: no Python modules, only dependency metadata.
+[tool.hatch.build.targets.wheel]
+bypass-selection = true
+
+[tool.uv.sources]
+galaxy-tool-refactor-cli = { workspace = true }
+galaxy-tool-refactor-mcp = { workspace = true }