galaxy-cli 1.0.0__tar.gz → 1.0.2__tar.gz

{galaxy_cli-1.0.0 → galaxy_cli-1.0.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: galaxy-cli
-Version: 1.0.0
+Version: 1.0.2
 Summary: CLI harness for the Galaxy bioinformatics platform
 Author: cli-anything
 License-Expression: MIT
@@ -28,7 +28,7 @@ the standalone `galaxy-cli` package.
 
 ## Prerequisites
 
-- Python 3.10+
+- Python 3.9+
 - A running Galaxy server
 - A Galaxy API key from your target instance
 
@@ -68,15 +68,24 @@ export GALAXY_API_KEY=your-api-key
 galaxy-cli config test
 ```
 
+Session state is stored in `~/.galaxy-cli/session.json`. It is intended for a
+single active writer; for parallel automation or multiple concurrent agents,
+pass `--history-id` explicitly instead of relying on shared session state.
+
 ## Usage
 
 ```bash
 galaxy-cli history list
 galaxy-cli history create "My Analysis"
 galaxy-cli tool search "bowtie"
-galaxy-cli --json workflow list
+galaxy-cli workflow list
+galaxy-cli workflow list | jq .
+galaxy-cli --human config show
 ```
 
+`galaxy-cli` defaults to compact JSON output. Use `--human` for
+human-readable terminal output.
+
 Run the REPL:
 
 ```bash
@@ -86,5 +95,5 @@ galaxy-cli
 ## Tests
 
 ```bash
-python3 -m pytest cli_anything/galaxy/tests/ -v
+python3 -m pytest galaxy_cli/tests/ -v
 ```

{galaxy_cli-1.0.0 → galaxy_cli-1.0.2}/README.md

@@ -9,7 +9,7 @@ the standalone `galaxy-cli` package.
 
 ## Prerequisites
 
-- Python 3.10+
+- Python 3.9+
 - A running Galaxy server
 - A Galaxy API key from your target instance
 
@@ -49,15 +49,24 @@ export GALAXY_API_KEY=your-api-key
 galaxy-cli config test
 ```
 
+Session state is stored in `~/.galaxy-cli/session.json`. It is intended for a
+single active writer; for parallel automation or multiple concurrent agents,
+pass `--history-id` explicitly instead of relying on shared session state.
+
 ## Usage
 
 ```bash
 galaxy-cli history list
 galaxy-cli history create "My Analysis"
 galaxy-cli tool search "bowtie"
-galaxy-cli --json workflow list
+galaxy-cli workflow list
+galaxy-cli workflow list | jq .
+galaxy-cli --human config show
 ```
 
+`galaxy-cli` defaults to compact JSON output. Use `--human` for
+human-readable terminal output.
+
 Run the REPL:
 
 ```bash
@@ -67,5 +76,5 @@ galaxy-cli
 ## Tests
 
 ```bash
-python3 -m pytest cli_anything/galaxy/tests/ -v
+python3 -m pytest galaxy_cli/tests/ -v
 ```

{galaxy_cli-1.0.0/cli_anything/galaxy → galaxy_cli-1.0.2/galaxy_cli}/__init__.py

@@ -1,3 +1,3 @@
 """galaxy-cli: CLI harness for Galaxy bioinformatics platform."""
 
-__version__ = "1.0.0"
+__version__ = "1.0.2"

galaxy_cli-1.0.2/galaxy_cli/__main__.py

@@ -0,0 +1,5 @@
+"""Allow running as: python -m galaxy_cli"""
+
+from galaxy_cli.cli import main
+
+main()