fusion-bench 0.2.7__tar.gz → 0.2.8__tar.gz

{fusion_bench-0.2.7 → fusion_bench-0.2.8}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: fusion_bench
-Version: 0.2.7
+Version: 0.2.8
 Summary: A Comprehensive Benchmark of Deep Model Fusion
 Author-email: Anke Tang <tang.anke@foxmail.com>
 License: MIT License

{fusion_bench-0.2.7 → fusion_bench-0.2.8}/fusion_bench/compat/method/base_algorithm.py

@@ -1,5 +1,5 @@
 from abc import ABC, abstractmethod
-from typing import Optional, TYPE_CHECKING
+from typing import TYPE_CHECKING, Optional
 
 from omegaconf import DictConfig
 

{fusion_bench-0.2.7 → fusion_bench-0.2.8}/fusion_bench/dataset/clip_dataset.py

@@ -65,4 +65,7 @@ class CLIPDataset(torch.utils.data.Dataset):
         else:
             # if processor is None, return the raw image directly
             inputs = image
+        # convert boolean label to int, this is for the case when the label is a binary classification task
+        if isinstance(item["label"], bool):
+            item["label"] = 1 if item["label"] else 0
         return inputs, item["label"]

fusion_bench-0.2.8/fusion_bench/dataset/fer2013.py

@@ -0,0 +1,12 @@
+from datasets import load_dataset
+
+
+def load_fer2013(path: str = "clip-benchmark/wds_fer2013", split: str = "train"):
+    dataset = load_dataset(path, split=split)
+    dataset = dataset.remove_columns(["__key__", "__url__"])
+    dataset = dataset.rename_columns({"jpg": "image", "cls": "label"})
+    return dataset
+
+if __name__ == "__main__":
+    dataset = load_fer2013(split="test")
+    print(dataset)

{fusion_bench-0.2.7 → fusion_bench-0.2.8}/fusion_bench/method/__init__.py

@@ -49,6 +49,7 @@ _import_structure = {
         "PWEMoExactParetoOptimalForCLIP",
     ],
     "ada_svd": ["AdaSVDMergingForCLIPVisionModel"],
+    "task_singular_vector": ["TaskSingularVectorMerging"],
     # plug-and-play model merging methods
     "concrete_subspace": [
         "ConcreteTaskArithmeticAlgorithmForCLIP",
@@ -153,6 +154,7 @@ if TYPE_CHECKING:
         SparseLoForLlama,
     )
     from .task_arithmetic import TaskArithmeticAlgorithm
+    from .task_singular_vector import TaskSingularVectorMerging
     from .ties_merging import TiesMergingAlgorithm
     from .we_moe import CLIPWeightEnsemblingMoEAlgorithm
     from .weighted_average import WeightedAverageAlgorithm, WeightedAverageForLLama

{fusion_bench-0.2.7 → fusion_bench-0.2.8}/fusion_bench/method/classification/clip_finetune.py

@@ -41,11 +41,10 @@ from transformers.models.clip.modeling_clip import CLIPVisionTransformer
 from fusion_bench import print_parameters
 from fusion_bench.compat.method import ModelFusionAlgorithm
 from fusion_bench.compat.modelpool import to_modelpool
-from fusion_bench.compat.modelpool.huggingface_clip_vision import (
-    HuggingFaceClipVisionPool,
-)
+from fusion_bench.dataset.clip_dataset import CLIPDataset
 from fusion_bench.mixins import CLIPClassificationMixin
 from fusion_bench.mixins.simple_profiler import SimpleProfilerMixin
+from fusion_bench.modelpool import CLIPVisionModelPool
 from fusion_bench.models.hf_clip import HFCLIPClassifier
 from fusion_bench.models.linearized.linearized_model_utils import LinearizedModelWraper
 from fusion_bench.utils.data import InfiniteDataLoader
@@ -92,12 +91,12 @@ class ImageClassificationFineTuningForCLIP(
     A class for fine-tuning CLIP models for image classification tasks.
     """
 
-    def run(self, modelpool: HuggingFaceClipVisionPool):
+    def run(self, modelpool: CLIPVisionModelPool):
         """
         Executes the fine-tuning process.
 
         Args:
-            modelpool (HuggingFaceClipVisionPool): The modelpool is responsible for loading the pre-trained model and training datasets.
+            modelpool (CLIPVisionModelPool): The modelpool is responsible for loading the pre-trained model and training datasets.
 
         Returns:
             VisionModel: The fine-tuned vision model.
@@ -109,9 +108,7 @@ class ImageClassificationFineTuningForCLIP(
 
         L.seed_everything(config.seed)
 
-        task_names = [
-            dataset_config["name"] for dataset_config in modelpool.config.train_datasets
-        ]
+        task_names = modelpool.train_dataset_names
         with self.profile("setup model and optimizer"):
             processor, classifier, optimizer, lr_scheduler = self.setup_model()
 
@@ -133,7 +130,7 @@ class ImageClassificationFineTuningForCLIP(
 
         with self.profile("setup data"):
             train_datasets = [
-                modelpool.get_train_dataset(task_name, processor)
+                CLIPDataset(modelpool.load_train_dataset(task_name), processor)
                 for task_name in task_names
             ]
             train_dataloaders = [
@@ -157,6 +154,7 @@ class ImageClassificationFineTuningForCLIP(
             range(config.num_steps),
             desc=self.finetune_method,
             disable=not self.fabric.is_global_zero,
+            dynamic_ncols=True,
         ):
             optimizer.zero_grad()
             loss = 0
@@ -183,7 +181,7 @@ class ImageClassificationFineTuningForCLIP(
                 save_path = os.path.join(
                     self.log_dir, "checkpoints", f"step={step_idx}.ckpt"
                 )
-                self.save_model(classifier, save_path, trainable_only=True)
+                self.save_model(classifier, save_path)
 
         if config.state_dict_save_path is not None:
             self.save_model(
@@ -232,9 +230,8 @@ class ImageClassificationFineTuningForCLIP(
         config = self.config
         modelpool = self.modelpool
 
-        pretrained_model_config = modelpool.get_model_config("_pretrained_")
-        clip_model: CLIPModel = CLIPModel.from_pretrained(pretrained_model_config.path)
-        processor = CLIPProcessor.from_pretrained(pretrained_model_config.path)
+        clip_model: CLIPModel = modelpool.load_clip_model("_pretrained_")
+        processor = modelpool.load_processor()
 
         self.finetune_method = "full fine-tune"
         if config.use_lora or config.use_l_lora:

fusion_bench-0.2.8/fusion_bench/method/surgery/__init__.py

@@ -0,0 +1 @@
+from .clip_layer_wise_adamerging_surgery import CLIPLayerWiseAdaMergingSurgeryAlgorithm

{fusion_bench-0.2.7 → fusion_bench-0.2.8}/fusion_bench/method/surgery/clip_layer_wise_adamerging_surgery.py

@@ -154,4 +154,4 @@ class CLIPLayerWiseAdaMergingSurgeryAlgorithm(
                 self._program.evaluate_merged_model(self._program.taskpool, alpha_model)
 
         log.info("test the result of Adamerging")
-        return merged_model
+        return {"adamerging": merged_model, "surgery": alpha_model}

fusion_bench-0.2.8/fusion_bench/method/tall_mask/utils.py

@@ -0,0 +1,234 @@
+import copy
+import os
+from typing import List, Optional
+
+import numpy as np
+import torch
+
+from fusion_bench.utils import state_dict_to_vector, vector_to_state_dict
+
+
+def generate_task_masks(
+    tv_flat_checks: torch.Tensor,
+    flat_ft: torch.Tensor,
+    flat_ptm: torch.Tensor,
+    tv: Optional[torch.Tensor] = None,
+    tall_mask_lambda: float = 1.0,
+) -> torch.Tensor:
+    """
+    Generate task-specific TALL masks
+    TALL masks are generated as: mask_t = |theta_0 - theta_t| > |theta_mt - theta_t| * lambda
+
+    Args:
+        tv_flat_checks: individual task vectors
+        flat_ft: individual theta_t (fine-tuned weights)
+        flat_ptm: theta_0 (pre-trained weight)
+        tv: multi-task vector
+        tall_mask_lambda: hyper-parameter lambda for generating TALL masks
+    Returns:
+        final_mask: generated TALL masks with the given lambda, in shape (n_task, n_parameter)
+    """
+
+    print(f"Generating TALL masks.")
+
+    if tv is None:
+        tv = tv_flat_checks.sum(0)
+
+    flat_multi = flat_ptm + tv
+
+    original_shape = flat_ft.shape
+
+    # generate masks by comparing the l1 distance between |theta_0 - theta_t| and |theta_mt - theta_t|
+    diff_pt_ft = (flat_ptm - flat_ft).abs()
+    diff_multi_ft = (flat_multi - flat_ft).abs()
+    # compare the l1 distance, scaled with hyper-parameter lambda
+    mask = diff_pt_ft > diff_multi_ft * tall_mask_lambda
+
+    final_mask = (
+        mask.squeeze() if original_shape == tv_flat_checks.squeeze().shape else mask
+    )
+
+    print(
+        f"Average sparsity for the mask with tall_mask_lambda of {tall_mask_lambda}: {final_mask.float().mean():.4f}"
+    )
+    return final_mask
+
+
+def construct_tall_mask(
+    tv_flat_checks: torch.Tensor,
+    flat_ft: torch.Tensor,
+    flat_ptm: torch.Tensor,
+    merged_tv: torch.Tensor,
+    ptm_check: torch.Tensor,
+    remove_keys: List[str],
+    config,
+):
+    """
+    Construct TALL masks for all tasks for each lambda, and store in dictionary
+
+    Args:
+        tv_flat_checks: individual task vectors
+        flat_ft: individual theta_t (fine-tuned weights)
+        flat_ptm: theta_0 (pre-trained weight)
+        merged_tv: multi-task vector
+        ptm_check: pre-trained weight as state dictionary
+        remove_keys: the keys to be removed when converting between dictionary and vector
+    Returns:
+        tall_masks: constructed TALL masks in dictionary format of {lambda: {task: mask}}
+    """
+    tall_masks = {}
+    for tall_mask_lambda in [0.2, 0.3, 0.4, 0.5, 0.6]:
+        # generate tall masks for each lambda
+        masks_at_scale = generate_task_masks(
+            tv_flat_checks,
+            flat_ft,
+            flat_ptm,
+            tall_mask_lambda=tall_mask_lambda,
+            tv=merged_tv,
+        )
+        # convert vectors to dictionary
+        masks_at_scale = [
+            vector_to_state_dict(mask, ptm_check, remove_keys=remove_keys)
+            for mask in masks_at_scale
+        ]
+        # store the masks with {dataset: mask}
+        tall_masks[tall_mask_lambda] = {
+            key: value for key, value in zip(config.DATASETS, masks_at_scale)
+        }
+    return tall_masks
+
+
+def find_optimal_mask(val_metrics, eval_masks, args, save_masks=True):
+    """
+    Respectively finds the optimal mask for each data task based on the validation accuracy
+
+    Args:
+        val_metrics: validation metrics for each lambda
+        eval_masks: all generated masks
+
+    Returns:
+        best_masks_for_test: the best masks for each task, selected based on validation accuracy from each task
+        best_val_metrics: best validation metrics for each task
+    """
+    # transpose the dict from lambda-task to task-lambda
+    transposed_dict = {}
+    for key, inner_dict in val_metrics.items():
+        for inner_key, value in inner_dict.items():
+            if inner_key not in transposed_dict:
+                transposed_dict[inner_key] = {}
+            transposed_dict[inner_key][key] = value
+
+    # for each task, find the best lambda
+    max_subkeys = {
+        key: max(inner_dict, key=inner_dict.get)
+        for key, inner_dict in transposed_dict.items()
+    }
+
+    # select the best mask for each task, which will be used for testing later
+    best_masks_for_test = {}
+    best_masks_for_test_vector = {}  # the selected masks as vectors
+    best_val_metrics = {}
+    # respectively for each task:
+    for ds in args.DATASETS:
+        # select the lambda which achieves the best valdiation accuracy
+        best_lambda = float(max_subkeys[ds + "Val:top1"])
+        # select the mask based on the selected lambda, save as dictionaries
+        best_masks_for_test[ds] = eval_masks[best_lambda][ds]
+        # select the mask based on the selected lambda, save as vectors
+        best_masks_for_test_vector[ds] = state_dict_to_vector(
+            eval_masks[best_lambda][ds], remove_keys=[]
+        )
+        print(f"Best lambda for {ds} is {best_lambda}")
+        # save the best validation metric based on the selected lambda
+        best_val_metrics[ds + "Val:top1"] = val_metrics[best_lambda][ds + "Val:top1"]
+
+    # save the best masks in disk
+    if save_masks and not args.method.load_mask:
+        # convert to numpy to save with np.packbits for saving storage
+        best_masks_for_test_vector = {
+            k: np.packbits(v) for k, v in best_masks_for_test_vector.items()
+        }
+        mask_save_dir = args.model_location.replace("checkpoints", "tall_masks")
+        mask_name = (
+            f"TALL_mask_{args.num_tasks}task.npy"
+            if not args.method.use_ties
+            else f"TALL_mask_{args.num_tasks}task_use_ties_{args.method.ties_agg}.npy"
+        )
+        np.save(
+            os.path.join(mask_save_dir, args.model, mask_name),
+            best_masks_for_test_vector,
+        )
+        del best_masks_for_test_vector
+
+    return best_masks_for_test, best_val_metrics
+
+
+def load_tall_mask(remove_keys, ptm_check, config):
+    """Loads TALL masks from disk, unpack and transform to state dictionaries."""
+    mask_location = config.model_location.replace("checkpoints", "tall_masks")
+    try:
+        if config.method.use_ties:
+            print("==== Loading TALL Masks built with TIES ====")
+            tall_masks = torch.load(
+                os.path.join(
+                    mask_location,
+                    config.model,
+                    f"TALL_mask_{config.num_tasks}task_use_ties.npy",
+                )
+            )
+        else:
+            print("==== Loading TALL Masks built with Task Arithmetic ====")
+            tall_masks = torch.load(
+                os.path.join(
+                    mask_location, config.model, f"TALL_mask_{config.num_tasks}task.npy"
+                )
+            )
+    except:
+        raise Exception("TALL Masks are not constructed yet.")
+
+    # unpack masks and convert back to torch tensors
+    tall_masks = {k: torch.from_numpy(np.unpackbits(v)) for k, v in tall_masks.items()}
+
+    # convert vectors to dictionaries
+    tall_masks = {
+        dataset: vector_to_state_dict(mask, ptm_check, remove_keys=remove_keys)
+        for dataset, mask in tall_masks.items()
+    }
+
+    return tall_masks
+
+
+def construct_consensus_mask(ptm_check, prun_thre_k, config, remove_keys=[]):
+    """
+    Generate consensus mask by filtering out least-used parameters
+
+    Args:
+        ptm_check: pretrained_checkpoint as state dictionary
+        prun_thre_k: weight-pruning threhold, stands for the least number of activated tasks for a parameter to be preserved from pruning
+                if prun_thre_k is set to 2: remove both catastrophic and selfish weights;
+                if prun_thre_k is set to 1: remove only catastrophic weights;
+                if prun_thre_k is set to 0: remove no weights -> reduce to TA or TIES
+                if prun_thre_k is set to > num_tasks: remove all weights -> reduce to zero-shot
+    Returns:
+        consensus_mask_vector: constructed consensus mask as vector (boolean in shape (n_parameter, ))
+    """
+
+    print("==== Generating Consensus Mask ====")
+    # load TALL masks (in shape (n_task, n_parameter))
+    tall_masks = load_tall_mask(remove_keys, ptm_check, config)
+    tall_masks = list(tall_masks.values())
+
+    # generate consensus masks
+    consensus_mask = copy.deepcopy(tall_masks[0])
+    for key, value in consensus_mask.items():
+        consensus_mask[key] = torch.zeros_like(value)
+        # count for each parameter, the tasks it has been activated for
+        for mask in tall_masks:
+            consensus_mask[key] = consensus_mask[key] + mask[key].float()
+        # filter out the least-activated parameters based on given threshold
+        consensus_mask[key] = consensus_mask[key].float() >= prun_thre_k
+    consensus_mask_vector = state_dict_to_vector(
+        consensus_mask, remove_keys=remove_keys
+    )
+
+    return consensus_mask_vector

fusion_bench-0.2.8/fusion_bench/method/task_singular_vector/TSVC.py

@@ -0,0 +1,16 @@
+import torch
+from torch import Tensor, nn
+
+from fusion_bench import BaseAlgorithm
+
+from .utils import TSVC_utils, check_parameterNamesMatch
+
+
+class TaskSingularVectorCompression(BaseAlgorithm):
+    def __init__(self, **kwargs):
+        super().__init__(**kwargs)
+
+    def run(self, modelpool):
+        raise NotImplementedError(
+            "Task Singular Vector Compression is not implemented yet."
+        )

fusion_bench-0.2.8/fusion_bench/method/task_singular_vector/TSVM.py

@@ -0,0 +1,63 @@
+"""
+Example:
+
+```bash
+fusion_bench \
+    method=task_singular_vector/TaskSingularVectorMerging \
+    modelpool=CLIPVisionModelPool/clip-vit-base-patch32_TALL20_model_only \
+    taskpool=CLIPVisionModelTaskPool/clip-vit-classification_TALL20
+```
+"""
+
+from typing import List, Optional
+
+import torch
+from torch import Tensor, nn
+
+from fusion_bench import BaseAlgorithm
+from fusion_bench.mixins import LightningFabricMixin
+from fusion_bench.utils import timeit_context
+from fusion_bench.utils.state_dict_arithmetic import state_dict_sub, state_dict_add
+from fusion_bench.utils.type import StateDictType
+
+from .utils import (
+    TSVM_utils,
+    check_parameterNamesMatch,
+    check_state_dicts_equal,
+    state_dict_to_vector,
+    vector_to_state_dict,
+)
+
+
+class TaskSingularVectorMerging(BaseAlgorithm, LightningFabricMixin):
+
+    def __init__(
+        self,
+        remove_keys: Optional[List[str]] = None,
+        **kwargs,
+    ):
+        self.remove_keys = remove_keys if remove_keys is not None else []
+        super().__init__(**kwargs)
+
+    def run(self, modelpool):
+        # Load the pre-trained model and the fine-tuned models
+        pretrained_model = modelpool.load_pretrained_model()
+        finetuned_models = list(modelpool.models())
+
+        ptm_check = pretrained_model.state_dict()
+        ft_checks = [model.state_dict() for model in finetuned_models]
+        check_parameterNamesMatch(ft_checks + [ptm_check])
+
+        with timeit_context("Flattening out Checkpoints"):
+            task_vectors = [state_dict_sub(check, ptm_check) for check in ft_checks]
+
+        new_merged_tv = TSVM_utils.compute_and_sum_svd_mem_reduction(
+            task_vectors,
+            exclude_keys=self.remove_keys,
+            accelerator=self.fabric.device,
+        )
+
+        pretrained_model.load_state_dict(
+            state_dict_add(new_merged_tv, pretrained_model.state_dict())
+        )
+        return pretrained_model

fusion_bench-0.2.8/fusion_bench/method/task_singular_vector/__init__.py

@@ -0,0 +1,9 @@
+"""
+This module is modified from the original code of the paper:
+
+- Gargiulo, et.al. Task Singular Vectors: Reducing Task Interference in Model Merging
+    - http://arxiv.org/abs/2412.00081
+    - https://github.com/AntoAndGar/task_singular_vectors/
+"""
+
+from .TSVM import TaskSingularVectorMerging

fusion_bench-0.2.8/fusion_bench/method/task_singular_vector/utils/TSVC_utils.py

@@ -0,0 +1,50 @@
+import torch
+
+
+def compute_svd_and_compress(key, matrix, sv_reduction):
+    """
+    Computes the Singular Value Decomposition (SVD) of a given matrix and compresses it by reducing the number of singular values.
+
+    Args:
+        key (Any): An identifier for the matrix.
+        matrix (torch.Tensor): The input matrix to decompose.
+        sv_reduction (float): The fraction of singular values to retain (0 < sv_reduction <= 1).
+
+    Returns:
+        tuple: A tuple containing:
+            - key (Any): The original identifier for the matrix.
+            - u (torch.Tensor): The left singular vectors of the reduced SVD.
+            - s (torch.Tensor): The reduced singular values.
+            - v (torch.Tensor): The right singular vectors of the reduced SVD.
+    """
+    u, s, v = torch.linalg.svd(matrix, full_matrices=False)
+    reduced_index_s = int(s.shape[0] * sv_reduction)
+    return key, u[:, :reduced_index_s], s[:reduced_index_s], v[:reduced_index_s, :]
+
+
+def compress_tv(task_vectors, sv_reduction):
+    """
+    Compress task vectors using Singular Value Decomposition (SVD).
+
+    Args:
+        task_vectors (dict): A dictionary where keys are dataset names and values are task vectors.
+            Each task vector is expected to have a 'vector' attribute which is a dictionary
+            with keys as layer names and values as layer matrices.
+        sv_reduction (int): The fraction of singular values to keep for compression.
+
+    Returns:
+        dict: A dictionary with the same structure as `task_vectors`, but with each layer matrix
+            replaced by its compressed SVD components (u, s, v) if the layer is 2-dimensional.
+            If the layer is not 2-dimensional, it is stored as is under the key "dim1".
+    """
+    with torch.no_grad():
+        svd_dict = {}
+        for dataset, task_vector in task_vectors.items():
+            svd_dict[dataset] = {}
+            for key, layer in task_vector.vector.items():
+                if len(layer.shape) == 2:  # and "text_projection" not in key:
+                    _, u, s, v = compute_svd_and_compress(key, layer, sv_reduction)
+                    svd_dict[dataset][key] = {"u": u, "s": s, "v": v}
+                else:
+                    svd_dict[dataset][key] = {"dim1": layer}
+        return svd_dict