funcnodes-span 0.3.6__tar.gz → 0.3.7__tar.gz

{funcnodes_span-0.3.6/src/funcnodes_span.egg-info → funcnodes_span-0.3.7}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: funcnodes-span
-Version: 0.3.6
+Version: 0.3.7
 Summary: SPectral ANalysis (SPAN) for funcnodes
 Author-email: Kourosh Rezaei <kourosh.rezaei@linkdlab.de>, Julian Kimmig <julian.kimmig@linkdlab.de>
 License: AGPL-3.0
@@ -23,7 +23,8 @@ Requires-Dist: funcnodes_numpy
 Requires-Dist: funcnodes_pandas
 Requires-Dist: funcnodes_plotly
 Requires-Dist: pybaselines
-Requires-Dist: funcnodes-lmfit
+Requires-Dist: funcnodes-lmfit>=0.2.0
 Requires-Dist: numba<1.0.0,>=0.61.0
+Dynamic: license-file
 
 SPectral ANalysis (SPAN) for funcnodes

{funcnodes_span-0.3.6 → funcnodes_span-0.3.7}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "funcnodes-span"
-version = "0.3.6"
+version = "0.3.7"
 description = "SPectral ANalysis (SPAN) for funcnodes"
 readme = "README.md"
 classifiers = [ "Development Status :: 4 - Beta", "Intended Audience :: Developers", "Intended Audience :: Education", "Intended Audience :: Science/Research", "License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)",]
@@ -13,7 +13,7 @@ dependencies = [
  "funcnodes_pandas",
  "funcnodes_plotly",
  "pybaselines",
- "funcnodes-lmfit",
+ "funcnodes-lmfit>=0.2.0",
  "numba (>=0.61.0,<1.0.0)",
 ]
 [[project.authors]]
@@ -26,6 +26,7 @@ email = "julian.kimmig@linkdlab.de"
 
 [dependency-groups]
 dev = [
+ "commitizen>=4.8.3",
  "funcnodes-module>=0.1.22",
  "pooch>=1.8.2",
  "pre-commit>=4.1.0",
@@ -50,3 +51,10 @@ shelf = "funcnodes_span:NODE_SHELF"
 
 [tool.setuptools.packages.find]
 where = [ "src",]
+
+[tool.commitizen]
+name = "cz_conventional_commits"
+tag_format = "$version"
+version_scheme = "pep440"
+version_provider = "uv"
+update_changelog_on_bump = true

{funcnodes_span-0.3.6 → funcnodes_span-0.3.7}/src/funcnodes_span/peak_analysis.py

@@ -1,10 +1,10 @@
 from funcnodes import NodeDecorator, Shelf
 import funcnodes as fn
+from funcnodes_span._curves import estimate_noise
 import numpy as np
 from exposedfunctionality import controlled_wrapper
 from typing import Optional, List, Tuple
 from scipy.signal import find_peaks
-from scipy.stats import norm
 from scipy import signal, interpolate
 from scipy.ndimage import gaussian_filter1d
 from tqdm import tqdm
@@ -119,12 +119,11 @@ def peak_finder(
     # Calculate the standard deviation of peak prominences
     rnd = np.random.RandomState(42)
     # Fit a normal distribution to the input array
-    mu, std = norm.fit(y)
+    noise = estimate_noise(x=x, y=_y) / noise_level
     if peaks is not None:
         try:
             # Add noise to the input array
-            noise = rnd.normal(mu / noise_level, std / noise_level, np.shape(y))
-            y = y + noise
+            y = y + rnd.normal(0, noise, np.shape(y))
 
             # Find the minimums in the copy of the input array
             mins, _ = find_peaks(-1 * y)
@@ -155,8 +154,7 @@ def peak_finder(
 
         except ValueError:
             # If an error occurs when adding noise to the input array, add stronger noise and try again
-            noise = rnd.normal(mu / 100, std / 100, np.shape(y))
-            y = y + noise
+            y = y + rnd.normal(0, noise * 100, np.shape(y))
             mins, _ = find_peaks(-1 * y)
             for peak in peaks:
                 right_min = mins[np.argmax(mins > peak)]

{funcnodes_span-0.3.6 → funcnodes_span-0.3.7/src/funcnodes_span.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: funcnodes-span
-Version: 0.3.6
+Version: 0.3.7
 Summary: SPectral ANalysis (SPAN) for funcnodes
 Author-email: Kourosh Rezaei <kourosh.rezaei@linkdlab.de>, Julian Kimmig <julian.kimmig@linkdlab.de>
 License: AGPL-3.0
@@ -23,7 +23,8 @@ Requires-Dist: funcnodes_numpy
 Requires-Dist: funcnodes_pandas
 Requires-Dist: funcnodes_plotly
 Requires-Dist: pybaselines
-Requires-Dist: funcnodes-lmfit
+Requires-Dist: funcnodes-lmfit>=0.2.0
 Requires-Dist: numba<1.0.0,>=0.61.0
+Dynamic: license-file
 
 SPectral ANalysis (SPAN) for funcnodes

{funcnodes_span-0.3.6 → funcnodes_span-0.3.7}/src/funcnodes_span.egg-info/requires.txt

@@ -5,5 +5,5 @@ funcnodes_numpy
 funcnodes_pandas
 funcnodes_plotly
 pybaselines
-funcnodes-lmfit
+funcnodes-lmfit>=0.2.0
 numba<1.0.0,>=0.61.0