fullwave25 1.4.1.dev1__tar.gz → 1.4.1.dev2__tar.gz

{fullwave25-1.4.1.dev1 → fullwave25-1.4.1.dev2}/.bumpversion.toml

@@ -1,5 +1,5 @@
 [tool.bumpversion]
-current_version = "1.4.1-dev1"
+current_version = "1.4.1-dev2"
 parse = """(?x)
     (?P<major>0|[1-9]\\d*)\\.
     (?P<minor>0|[1-9]\\d*)\\.

{fullwave25-1.4.1.dev1 → fullwave25-1.4.1.dev2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.5
 Name: fullwave25
-Version: 1.4.1-dev1
+Version: 1.4.1-dev2
 Summary: Fullwave 2.5: Ultrasound wave propagation simulation with heterogeneous power law attenuation modelling capabilities
 Author: Masashi Sode, Gianmarco Pinton
 Maintainer: Masashi Sode
@@ -19,6 +19,7 @@ Requires-Dist: numba>=0.63.1
 Requires-Dist: numexpr>=2.14.1
 Requires-Dist: numpy>=2.0.0
 Requires-Dist: opencv-python-headless>=4.12.0.88
+Requires-Dist: pillow>=12.3.0
 Requires-Dist: scipy>=1.13.1
 Requires-Dist: tomli>=2.3.0
 Requires-Dist: tqdm>=4.67.1
@@ -96,6 +97,34 @@ Fullwave 2.5 is developed and maintained by [Pinton Lab](https://github.com/pint
 If you use Fullwave 2.5 in your research, please cite this repository as:
 
 ```bibtex
+@ARTICLE{Sode2026-rd,
+  title        = {Spatially heterogeneous power-law attenuation with multiple
+                  relaxation mechanisms for ultrasound modeling},
+  author       = {Sode, Masashi and Pinton, Gianmarco},
+  journaltitle = {arXiv [physics.med-ph]},
+  date         = {2026},
+  eprint       = {2606.11103},
+  eprinttype   = {arXiv},
+  eprintclass  = {physics.med-ph},
+  url          = {http://arxiv.org/abs/2606.11103},
+}
+
+@ARTICLE{Sode2026-fullwave2,
+  title     = "{A fullwave model of the nonlinear wave equation with multiple
+               relaxations and relaxing perfectly matched layers for high-order
+               numerical finite difference solutions}",
+  author    = "Sode, Masashi and Pinton, Gianmarco",
+  journal   = "Phys. Med. Biol.",
+  publisher = "IOP Publishing",
+  month     =  "27~" # jul,
+  year      =  2026,
+  url       = "http://dx.doi.org/10.1088/1361-6560/ae9116",
+  doi       = "10.1088/1361-6560/ae9116",
+  issn      = "0031-9155,1361-6560",
+  language  = "en"
+}
+
+
 @software{Sode2025-fullwave25,
   author = {Sode, Masashi and Pinton, Gianmarco},
   title = {{Fullwave 2.5: Ultrasound wave propagation simulation with heterogeneous power law attenuation modelling capabilities}},
@@ -105,16 +134,6 @@ If you use Fullwave 2.5 in your research, please cite this repository as:
   url = {https://github.com/pinton-lab/fullwave25},
 }
 
-@ARTICLE{Pinton2021-fullwave2,
-  title = "A fullwave model of the nonlinear wave equation with multiple relaxations and relaxing perfectly matched layers for high-order numerical finite-difference solutions",
-  author = "Pinton, Gianmarco",
-  month = jun,
-  year = 2021,
-  copyright = "http://creativecommons.org/licenses/by/4.0/",
-  archivePrefix = "arXiv",
-  primaryClass = "physics.med-ph",
-  eprint = "2106.11476"
-}
 ```
 
 ---

{fullwave25-1.4.1.dev1 → fullwave25-1.4.1.dev2}/README.md

@@ -56,6 +56,34 @@ Fullwave 2.5 is developed and maintained by [Pinton Lab](https://github.com/pint
 If you use Fullwave 2.5 in your research, please cite this repository as:
 
 ```bibtex
+@ARTICLE{Sode2026-rd,
+  title        = {Spatially heterogeneous power-law attenuation with multiple
+                  relaxation mechanisms for ultrasound modeling},
+  author       = {Sode, Masashi and Pinton, Gianmarco},
+  journaltitle = {arXiv [physics.med-ph]},
+  date         = {2026},
+  eprint       = {2606.11103},
+  eprinttype   = {arXiv},
+  eprintclass  = {physics.med-ph},
+  url          = {http://arxiv.org/abs/2606.11103},
+}
+
+@ARTICLE{Sode2026-fullwave2,
+  title     = "{A fullwave model of the nonlinear wave equation with multiple
+               relaxations and relaxing perfectly matched layers for high-order
+               numerical finite difference solutions}",
+  author    = "Sode, Masashi and Pinton, Gianmarco",
+  journal   = "Phys. Med. Biol.",
+  publisher = "IOP Publishing",
+  month     =  "27~" # jul,
+  year      =  2026,
+  url       = "http://dx.doi.org/10.1088/1361-6560/ae9116",
+  doi       = "10.1088/1361-6560/ae9116",
+  issn      = "0031-9155,1361-6560",
+  language  = "en"
+}
+
+
 @software{Sode2025-fullwave25,
   author = {Sode, Masashi and Pinton, Gianmarco},
   title = {{Fullwave 2.5: Ultrasound wave propagation simulation with heterogeneous power law attenuation modelling capabilities}},
@@ -65,16 +93,6 @@ If you use Fullwave 2.5 in your research, please cite this repository as:
   url = {https://github.com/pinton-lab/fullwave25},
 }
 
-@ARTICLE{Pinton2021-fullwave2,
-  title = "A fullwave model of the nonlinear wave equation with multiple relaxations and relaxing perfectly matched layers for high-order numerical finite-difference solutions",
-  author = "Pinton, Gianmarco",
-  month = jun,
-  year = 2021,
-  copyright = "http://creativecommons.org/licenses/by/4.0/",
-  archivePrefix = "arXiv",
-  primaryClass = "physics.med-ph",
-  eprint = "2106.11476"
-}
 ```
 
 ---

{fullwave25-1.4.1.dev1 → fullwave25-1.4.1.dev2}/fullwave/__init__.py

@@ -66,7 +66,7 @@ try:
     __version__ = version("fullwave")
 except PackageNotFoundError:
     # Update via bump-my-version, not manually
-    __version__ = "1.4.1-dev1"
+    __version__ = "1.4.1-dev2"
 
 VERSION = __version__  # for convenience
 logger.info("Fullwave version: %s", __version__)

{fullwave25-1.4.1.dev1 → fullwave25-1.4.1.dev2}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "fullwave25"
-version = "1.4.1-dev1" # Update via bump-my-version, not manually
+version = "1.4.1-dev2" # Update via bump-my-version, not manually
 description = "Fullwave 2.5: Ultrasound wave propagation simulation with heterogeneous power law attenuation modelling capabilities"
 readme = "README.md"
 requires-python = ">=3.10"
@@ -14,6 +14,8 @@ dependencies = [
     "numba>=0.63.1",
     "numexpr>=2.14.1",
     "cupy-cuda12x>=13.6.0",
+    # Pillow comes in through matplotlib; releases before 12.3.0 have known security advisories.
+    "pillow>=12.3.0",
 ]
 authors = [{ name = "Masashi Sode" }, { name = "Gianmarco Pinton" }]
 maintainers = [{ name = "Masashi Sode" }]