frontveg 0.1.dev1__tar.gz → 0.2.0__tar.gz

{frontveg-0.1.dev1 → frontveg-0.2.0}/.github/dependabot.yml

@@ -1,14 +1,14 @@
-# Dependabot configuration
-# https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuring-dependabot-version-updates#enabling-github-dependabot-version-updates
-# https://til.simonwillison.net/github/dependabot-python-setup
-
-version: 2
-updates:
-- package-ecosystem: pip
-  directory: "/"
-  schedule:
-    interval: monthly
-  groups:
-    python-packages:
-      patterns:
-        - "*"
+# Dependabot configuration
+# https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuring-dependabot-version-updates#enabling-github-dependabot-version-updates
+# https://til.simonwillison.net/github/dependabot-python-setup
+
+version: 2
+updates:
+- package-ecosystem: pip
+  directory: "/"
+  schedule:
+    interval: monthly
+  groups:
+    python-packages:
+      patterns:
+        - "*"

{frontveg-0.1.dev1 → frontveg-0.2.0}/.github/workflows/test_and_deploy.yml

@@ -1,91 +1,91 @@
-# This workflows will upload a Python Package using Twine when a release is created
-# For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries
-
-name: tests
-
-on:
-  push:
-    branches:
-      - main
-      - npe2
-    tags:
-      - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10
-  pull_request:
-    branches:
-      - main
-      - npe2
-  workflow_dispatch:
-
-jobs:
-  test:
-    name: ${{ matrix.platform }} py${{ matrix.python-version }}
-    runs-on: ${{ matrix.platform }}
-    timeout-minutes: 30
-    strategy:
-      matrix:
-        platform: [ubuntu-latest, windows-latest, macos-latest]
-        python-version: ["3.10", "3.11", "3.12", "3.13"]
-
-    steps:
-      - uses: actions/checkout@v4
-
-      - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v5
-        with:
-          python-version: ${{ matrix.python-version }}
-
-      # these libraries enable testing on Qt on linux
-      - uses: tlambert03/setup-qt-libs@v1
-
-      # strategy borrowed from vispy for installing opengl libs on windows
-      - name: Install Windows OpenGL
-        if: runner.os == 'Windows'
-        run: |
-          git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git
-          powershell gl-ci-helpers/appveyor/install_opengl.ps1
-
-      # note: if you need dependencies from conda, considering using
-      # setup-miniconda: https://github.com/conda-incubator/setup-miniconda
-      # and
-      # tox-conda: https://github.com/tox-dev/tox-conda
-      - name: Install dependencies
-        run: |
-          python -m pip install --upgrade pip
-          python -m pip install setuptools tox tox-gh-actions
-
-      # this runs the platform-specific tests declared in tox.ini
-      - name: Test with tox
-        uses: aganders3/headless-gui@v2
-        with:
-          run: python -m tox
-        env:
-          PLATFORM: ${{ matrix.platform }}
-
-      - name: Coverage
-        uses: codecov/codecov-action@v3
-
-  deploy:
-    # this will run when you have tagged a commit, starting with "v*"
-    # and requires that you have put your twine API key in your
-    # github secrets (see readme for details)
-    needs: [test]
-    runs-on: ubuntu-latest
-    if: contains(github.ref, 'tags')
-    steps:
-      - uses: actions/checkout@v4
-      - name: Set up Python
-        uses: actions/setup-python@v5
-        with:
-          python-version: "3.x"
-      - name: Install dependencies
-        run: |
-          python -m pip install --upgrade pip
-          pip install -U setuptools setuptools_scm wheel twine build
-      - name: Build and publish
-        env:
-          TWINE_USERNAME: __token__
-          TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }}
-        run: |
-          git tag
-          python -m build .
-          twine upload dist/*
+# This workflows will upload a Python Package using Twine when a release is created
+# For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries
+
+name: tests
+
+on:
+  push:
+    branches:
+      - main
+      - npe2
+    tags:
+      - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10
+  pull_request:
+    branches:
+      - main
+      - npe2
+  workflow_dispatch:
+
+jobs:
+  test:
+    name: ${{ matrix.platform }} py${{ matrix.python-version }}
+    runs-on: ${{ matrix.platform }}
+    timeout-minutes: 30
+    strategy:
+      matrix:
+        platform: [ubuntu-latest, windows-latest, macos-latest]
+        python-version: ["3.10", "3.11", "3.12", "3.13"]
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      # these libraries enable testing on Qt on linux
+      - uses: tlambert03/setup-qt-libs@v1
+
+      # strategy borrowed from vispy for installing opengl libs on windows
+      - name: Install Windows OpenGL
+        if: runner.os == 'Windows'
+        run: |
+          git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git
+          powershell gl-ci-helpers/appveyor/install_opengl.ps1
+
+      # note: if you need dependencies from conda, considering using
+      # setup-miniconda: https://github.com/conda-incubator/setup-miniconda
+      # and
+      # tox-conda: https://github.com/tox-dev/tox-conda
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          python -m pip install setuptools tox tox-gh-actions
+
+      # this runs the platform-specific tests declared in tox.ini
+      - name: Test with tox
+        uses: aganders3/headless-gui@v2
+        with:
+          run: python -m tox
+        env:
+          PLATFORM: ${{ matrix.platform }}
+
+      - name: Coverage
+        uses: codecov/codecov-action@v3
+
+  deploy:
+    # this will run when you have tagged a commit, starting with "v*"
+    # and requires that you have put your twine API key in your
+    # github secrets (see readme for details)
+    needs: [test]
+    runs-on: ubuntu-latest
+    if: contains(github.ref, 'tags')
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.x"
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -U setuptools setuptools_scm wheel twine build
+      - name: Build and publish
+        env:
+          TWINE_USERNAME: __token__
+          TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }}
+        run: |
+          git tag
+          python -m build .
+          twine upload dist/*

{frontveg-0.1.dev1 → frontveg-0.2.0}/.napari-hub/DESCRIPTION.md

@@ -1,9 +1,9 @@
-<!-- This file is a placeholder for customizing description of your plugin 
-on the napari hub if you wish. The readme file will be used by default if
-you wish not to do any customization for the napari hub listing.
-
-If you need some help writing a good description, check out our 
-[guide](https://github.com/chanzuckerberg/napari-hub/wiki/Writing-the-Perfect-Description-for-your-Plugin)
--->
-
-The developer has not yet provided a napari-hub specific description.
+<!-- This file is a placeholder for customizing description of your plugin 
+on the napari hub if you wish. The readme file will be used by default if
+you wish not to do any customization for the napari hub listing.
+
+If you need some help writing a good description, check out our 
+[guide](https://github.com/chanzuckerberg/napari-hub/wiki/Writing-the-Perfect-Description-for-your-Plugin)
+-->
+
+The developer has not yet provided a napari-hub specific description.

{frontveg-0.1.dev1 → frontveg-0.2.0}/.napari-hub/config.yml

@@ -1,9 +1,9 @@
-# You may use this file to customize how your plugin page appears
-# on the napari hub: https://www.napari-hub.org/
-# See their wiki for details https://github.com/chanzuckerberg/napari-hub/wiki
-
-# Please note that this file should only be used IN ADDITION to entering
-# metadata fields (such as summary, description, authors, and various URLS)
-# in your standard python package metadata (e.g. setup.cfg, setup.py, or
-# pyproject.toml), when you would like those fields to be displayed
-# differently on the hub than in the napari application.
+# You may use this file to customize how your plugin page appears
+# on the napari hub: https://www.napari-hub.org/
+# See their wiki for details https://github.com/chanzuckerberg/napari-hub/wiki
+
+# Please note that this file should only be used IN ADDITION to entering
+# metadata fields (such as summary, description, authors, and various URLS)
+# in your standard python package metadata (e.g. setup.cfg, setup.py, or
+# pyproject.toml), when you would like those fields to be displayed
+# differently on the hub than in the napari application.

{frontveg-0.1.dev1 → frontveg-0.2.0}/.pre-commit-config.yaml

@@ -1,27 +1,27 @@
-repos:
-  - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v5.0.0
-    hooks:
-      - id: check-docstring-first
-      - id: end-of-file-fixer
-      - id: trailing-whitespace
-        exclude: ^\.napari-hub/.*
-      - id: check-yaml # checks for correct yaml syntax for github actions ex.
-  - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.6
-    hooks:
-      - id: ruff
-  - repo: https://github.com/psf/black
-    rev: 25.1.0
-    hooks:
-      - id: black
-  - repo: https://github.com/tlambert03/napari-plugin-checks
-    rev: v0.3.0
-    hooks:
-      - id: napari-plugin-checks
-  # https://mypy.readthedocs.io/en/stable/
-  # you may wish to add this as well!
-  # - repo: https://github.com/pre-commit/mirrors-mypy
-  #   rev: v1.9.0
-  #   hooks:
-  #     - id: mypy
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v5.0.0
+    hooks:
+      - id: check-docstring-first
+      - id: end-of-file-fixer
+      - id: trailing-whitespace
+        exclude: ^\.napari-hub/.*
+      - id: check-yaml # checks for correct yaml syntax for github actions ex.
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.11.6
+    hooks:
+      - id: ruff
+  - repo: https://github.com/psf/black
+    rev: 25.1.0
+    hooks:
+      - id: black
+  - repo: https://github.com/tlambert03/napari-plugin-checks
+    rev: v0.3.0
+    hooks:
+      - id: napari-plugin-checks
+  # https://mypy.readthedocs.io/en/stable/
+  # you may wish to add this as well!
+  # - repo: https://github.com/pre-commit/mirrors-mypy
+  #   rev: v1.9.0
+  #   hooks:
+  #     - id: mypy

{frontveg-0.1.dev1 → frontveg-0.2.0}/LICENSE

@@ -1,28 +1,28 @@
-
-Copyright (c) 2025, Herearii Metuarea
-All rights reserved.
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are met:
-
-* Redistributions of source code must retain the above copyright notice, this
-  list of conditions and the following disclaimer.
-
-* Redistributions in binary form must reproduce the above copyright notice,
-  this list of conditions and the following disclaimer in the documentation
-  and/or other materials provided with the distribution.
-
-* Neither the name of copyright holder nor the names of its
-  contributors may be used to endorse or promote products derived from
-  this software without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
-AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
-IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
-DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
-FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
-DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
-SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
-CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
-OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
-OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+Copyright (c) 2025, Herearii Metuarea
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+  list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
+  this list of conditions and the following disclaimer in the documentation
+  and/or other materials provided with the distribution.
+
+* Neither the name of copyright holder nor the names of its
+  contributors may be used to endorse or promote products derived from
+  this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

{frontveg-0.1.dev1 → frontveg-0.2.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: frontveg
-Version: 0.1.dev1
+Version: 0.2.0
 Summary: Segmentation of vegetation located to close to camera
 Author: Herearii Metuarea
 Author-email: herearii.metuarea@univ-angers.fr
@@ -50,19 +50,13 @@ Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
 Classifier: Topic :: Scientific/Engineering :: Image Processing
-Requires-Python: ==3.11.12
+Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE
 Requires-Dist: numpy
 Requires-Dist: magicgui
 Requires-Dist: qtpy
 Requires-Dist: scikit-image
-Requires-Dist: transformers==4.51.3
-Requires-Dist: torch>=2.3.1
-Requires-Dist: torchvision>=0.18.1
-Requires-Dist: hydra-core==1.3.2
-Requires-Dist: iopath>=0.1.10
-Requires-Dist: pillow>=9.4.0
 Provides-Extra: testing
 Requires-Dist: tox; extra == "testing"
 Requires-Dist: pytest; extra == "testing"
@@ -83,7 +77,14 @@ Dynamic: license-file
 [![npe2](https://img.shields.io/badge/plugin-npe2-blue?link=https://napari.org/stable/plugins/index.html)](https://napari.org/stable/plugins/index.html)
 [![Copier](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/copier-org/copier/master/img/badge/badge-grayscale-inverted-border-purple.json)](https://github.com/copier-org/copier)
 
-Segmentation of vegetation located to close to camera
+A plugin for foreground vegetation segmentation, tailored for trellised vegetation row images. It uses RGB images to perform inference and allows users to manually refine the generated mask.
+
+----------------------------------
+
+The method was developped by Herearii Metuarea, PHENET PhD at LARIS (French laboratory located in Angers, France) and Abdoul-Djalil Hamza Ousseini, AgroEcoPhen Engineer at IRHS (French Institute located in INRAe Angers, France) in Imhorphen team (bioimaging research group lead) under the supervision of Eric Duchêne (Research Engineer), Morgane Roth (Research Engineer) and David Rousseau (Full professor). This plugin was written by Herearii Metuarea and was designed in the context of the european project PHENET.
+
+
+![Data Warehouse](https://github.com/user-attachments/assets/781dc1ef-3ae0-47ff-9771-6de2879ed602)
 
 ----------------------------------
 
@@ -109,6 +110,19 @@ To install latest development version :
 
     pip install git+https://github.com/hereariim/frontveg.git
 
+## Description
+
+This plugin is a tool to perform image inference. This plugin contained two steps of image processing. First, from RGB image, an depth map is estimated and then thresholded to detect foreground and background in image. Second, grounding dino model detect foliage in foreground. The output is a binary mask where white colour are associated to foliage in foreground.
+
+## Contact
+
+Imhorphen team, bioimaging research group
+
+42 rue George Morel, Angers, France
+
+- Pr David Rousseau, david.rousseau@univ-angers.fr
+- Abdoul-djalil ousseini-hamza, abdoul-djalil.ousseini-hamza@inrae.fr
+- Herearii Metuarea, herearii.metuarea@univ-angers.fr
 
 ## Contributing
 

{frontveg-0.1.dev1 → frontveg-0.2.0}/README.md

@@ -1,69 +1,89 @@
-# frontveg
-
-[![License BSD-3](https://img.shields.io/pypi/l/frontveg.svg?color=green)](https://github.com/hereariim/frontveg/raw/main/LICENSE)
-[![PyPI](https://img.shields.io/pypi/v/frontveg.svg?color=green)](https://pypi.org/project/frontveg)
-[![Python Version](https://img.shields.io/pypi/pyversions/frontveg.svg?color=green)](https://python.org)
-[![tests](https://github.com/hereariim/frontveg/workflows/tests/badge.svg)](https://github.com/hereariim/frontveg/actions)
-[![codecov](https://codecov.io/gh/hereariim/frontveg/branch/main/graph/badge.svg)](https://codecov.io/gh/hereariim/frontveg)
-[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/frontveg)](https://napari-hub.org/plugins/frontveg)
-[![npe2](https://img.shields.io/badge/plugin-npe2-blue?link=https://napari.org/stable/plugins/index.html)](https://napari.org/stable/plugins/index.html)
-[![Copier](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/copier-org/copier/master/img/badge/badge-grayscale-inverted-border-purple.json)](https://github.com/copier-org/copier)
-
-Segmentation of vegetation located to close to camera
-
-----------------------------------
-
-This [napari] plugin was generated with [copier] using the [napari-plugin-template].
-
-<!--
-Don't miss the full getting started guide to set up your new package:
-https://github.com/napari/napari-plugin-template#getting-started
-
-and review the napari docs for plugin developers:
-https://napari.org/stable/plugins/index.html
--->
-
-## Installation
-
-You can install `frontveg` via [pip]:
-
-    pip install frontveg
-
-
-
-To install latest development version :
-
-    pip install git+https://github.com/hereariim/frontveg.git
-
-
-## Contributing
-
-Contributions are very welcome. Tests can be run with [tox], please ensure
-the coverage at least stays the same before you submit a pull request.
-
-## License
-
-Distributed under the terms of the [BSD-3] license,
-"frontveg" is free and open source software
-
-## Issues
-
-If you encounter any problems, please [file an issue] along with a detailed description.
-
-[napari]: https://github.com/napari/napari
-[copier]: https://copier.readthedocs.io/en/stable/
-[@napari]: https://github.com/napari
-[MIT]: http://opensource.org/licenses/MIT
-[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
-[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
-[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
-[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
-[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
-[napari-plugin-template]: https://github.com/napari/napari-plugin-template
-
-[file an issue]: https://github.com/hereariim/frontveg/issues
-
-[napari]: https://github.com/napari/napari
-[tox]: https://tox.readthedocs.io/en/latest/
-[pip]: https://pypi.org/project/pip/
-[PyPI]: https://pypi.org/
+# frontveg
+
+[![License BSD-3](https://img.shields.io/pypi/l/frontveg.svg?color=green)](https://github.com/hereariim/frontveg/raw/main/LICENSE)
+[![PyPI](https://img.shields.io/pypi/v/frontveg.svg?color=green)](https://pypi.org/project/frontveg)
+[![Python Version](https://img.shields.io/pypi/pyversions/frontveg.svg?color=green)](https://python.org)
+[![tests](https://github.com/hereariim/frontveg/workflows/tests/badge.svg)](https://github.com/hereariim/frontveg/actions)
+[![codecov](https://codecov.io/gh/hereariim/frontveg/branch/main/graph/badge.svg)](https://codecov.io/gh/hereariim/frontveg)
+[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/frontveg)](https://napari-hub.org/plugins/frontveg)
+[![npe2](https://img.shields.io/badge/plugin-npe2-blue?link=https://napari.org/stable/plugins/index.html)](https://napari.org/stable/plugins/index.html)
+[![Copier](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/copier-org/copier/master/img/badge/badge-grayscale-inverted-border-purple.json)](https://github.com/copier-org/copier)
+
+A plugin for foreground vegetation segmentation, tailored for trellised vegetation row images. It uses RGB images to perform inference and allows users to manually refine the generated mask.
+
+----------------------------------
+
+The method was developped by Herearii Metuarea, PHENET PhD at LARIS (French laboratory located in Angers, France) and Abdoul-Djalil Hamza Ousseini, AgroEcoPhen Engineer at IRHS (French Institute located in INRAe Angers, France) in Imhorphen team (bioimaging research group lead) under the supervision of Eric Duchêne (Research Engineer), Morgane Roth (Research Engineer) and David Rousseau (Full professor). This plugin was written by Herearii Metuarea and was designed in the context of the european project PHENET.
+
+
+![Data Warehouse](https://github.com/user-attachments/assets/781dc1ef-3ae0-47ff-9771-6de2879ed602)
+
+----------------------------------
+
+This [napari] plugin was generated with [copier] using the [napari-plugin-template].
+
+<!--
+Don't miss the full getting started guide to set up your new package:
+https://github.com/napari/napari-plugin-template#getting-started
+
+and review the napari docs for plugin developers:
+https://napari.org/stable/plugins/index.html
+-->
+
+## Installation
+
+You can install `frontveg` via [pip]:
+
+    pip install frontveg
+
+
+
+To install latest development version :
+
+    pip install git+https://github.com/hereariim/frontveg.git
+
+## Description
+
+This plugin is a tool to perform image inference. This plugin contained two steps of image processing. First, from RGB image, an depth map is estimated and then thresholded to detect foreground and background in image. Second, grounding dino model detect foliage in foreground. The output is a binary mask where white colour are associated to foliage in foreground.
+
+## Contact
+
+Imhorphen team, bioimaging research group
+
+42 rue George Morel, Angers, France
+
+- Pr David Rousseau, david.rousseau@univ-angers.fr
+- Abdoul-djalil ousseini-hamza, abdoul-djalil.ousseini-hamza@inrae.fr
+- Herearii Metuarea, herearii.metuarea@univ-angers.fr
+
+## Contributing
+
+Contributions are very welcome. Tests can be run with [tox], please ensure
+the coverage at least stays the same before you submit a pull request.
+
+## License
+
+Distributed under the terms of the [BSD-3] license,
+"frontveg" is free and open source software
+
+## Issues
+
+If you encounter any problems, please [file an issue] along with a detailed description.
+
+[napari]: https://github.com/napari/napari
+[copier]: https://copier.readthedocs.io/en/stable/
+[@napari]: https://github.com/napari
+[MIT]: http://opensource.org/licenses/MIT
+[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
+[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
+[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
+[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
+[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
+[napari-plugin-template]: https://github.com/napari/napari-plugin-template
+
+[file an issue]: https://github.com/hereariim/frontveg/issues
+
+[napari]: https://github.com/napari/napari
+[tox]: https://tox.readthedocs.io/en/latest/
+[pip]: https://pypi.org/project/pip/
+[PyPI]: https://pypi.org/