fractal-server 2.3.0a2__tar.gz → 2.3.0a3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/PKG-INFO +1 -1
- fractal_server-2.3.0a3/fractal_server/__init__.py +1 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/tasks/v2/background_operations_ssh.py +13 -3
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/pyproject.toml +2 -2
- fractal_server-2.3.0a2/fractal_server/__init__.py +0 -1
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/LICENSE +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/README.md +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/__main__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/alembic.ini +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/db/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/linkuserproject.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/security.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/dataset.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/project.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/state.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/task.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v1/workflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/collection_state.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/dataset.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/project.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/task.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/workflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/models/v2/workflowtask.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/admin/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/admin/v1.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/admin/v2.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/_aux_functions.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/dataset.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/project.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/task.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/task_collection.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/workflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v1/workflowtask.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/_aux_functions.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/dataset.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/images.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/project.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/status.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/submit.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/task.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/task_collection.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/task_collection_custom.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/task_collection_ssh.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/task_legacy.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/workflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/api/v2/workflowtask.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/auth.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/aux/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/aux/_job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/routes/aux/_runner.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/.gitignore +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/async_wrap.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/components.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/compress_folder.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/exceptions.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/_batching.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/_slurm_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/remote.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/ssh/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/ssh/_executor_wait_thread.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/ssh/_slurm_job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/ssh/executor.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/sudo/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/sudo/_check_jobs_status.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/sudo/_executor_wait_thread.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/sudo/_subprocess_run_as_user.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/executors/slurm/sudo/executor.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/extract_archive.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/filenames.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/set_start_and_last_task_index.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/shutdown.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/task_files.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_common.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_local/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_local/_local_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_local/_submit_setup.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_local/executor.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_slurm/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_slurm/_submit_setup.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/_slurm/get_slurm_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/common.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v1/handle_failed_job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local/_local_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local/_submit_setup.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local/executor.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local_experimental/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local_experimental/_local_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local_experimental/_submit_setup.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_local_experimental/executor.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_slurm/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_slurm/_submit_setup.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_slurm/get_slurm_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_slurm_ssh/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_slurm_ssh/_submit_setup.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/_slurm_ssh/get_slurm_config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/deduplicate_list.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/handle_failed_job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/merge_outputs.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/runner.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/runner_functions.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/runner_functions_low_level.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/task_interface.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/v2/v1_compat.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/runner/versions.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/_validators.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/user.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/applyworkflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/dataset.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/dumps.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/manifest.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/project.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/state.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/task.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/task_collection.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v1/workflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/dataset.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/dumps.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/job.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/manifest.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/project.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/status.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/task.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/task_collection.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/workflow.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/schemas/v2/workflowtask.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/app/security/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/config.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/data_migrations/README.md +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/gunicorn_fractal.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/images/__init__.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/images/models.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/images/tools.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/logger.py +0 -0
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- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/README +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/env.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/script.py.mako +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/4c308bcaea2b_add_task_args_schema_and_task_args_.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/4cedeb448a53_workflowtask_foreign_keys_not_nullables.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/50a13d6138fd_initial_schema.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/5bf02391cfef_v2.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/70e77f1c38b0_add_applyworkflow_first_task_index_and_.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/71eefd1dd202_add_slurm_accounts.py +0 -0
- {fractal_server-2.3.0a2 → fractal_server-2.3.0a3}/fractal_server/migrations/versions/84bf0fffde30_add_dumps_to_applyworkflow.py +0 -0
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__VERSION__ = "2.3.0a3"
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("Python interpreter:", "python_bin"),
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("Package name:", "package_name"),
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("Package version:", "package_version"),
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("Package parent folder:", "
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("Package parent folder:", "package_root_parent_remote"),
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("Manifest absolute path:", "manifest_path_remote"),
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]
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stdout_lines = stdout.splitlines()
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logger.error(error_msg)
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raise ValueError(error_msg)
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# Extract/drop parsed attributes
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pkg_attrs.pop("package_name")
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package_name = pkg_attrs.pop("package_name")
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python_bin = pkg_attrs.pop("python_bin")
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-
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package_root_parent_remote = pkg_attrs.pop(
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"package_root_parent_remote"
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)
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manifest_path_remote = pkg_attrs.pop("manifest_path_remote")
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# FIXME SSH: Use more robust logic to determine `package_root`,
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# e.g. as in the custom task-collection endpoint (where we use
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# `importlib.util.find_spec`)
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package_name_underscore = package_name.replace("-", "_")
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Path(package_root_parent_remote) / package_name_underscore
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manifest = json.load(f)
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[tool.poetry]
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name = "fractal-server"
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version = "2.3.
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authors = [
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current_version = "2.3.0a3"
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version_pattern = "MAJOR.MINOR.PATCH[PYTAGNUM]"
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commit_message = "bump version {old_version} -> {new_version}"
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commit = true
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