fractal-server 2.17.0a1__tar.gz → 2.17.0a2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (267) hide show
  1. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/PKG-INFO +1 -1
  2. fractal_server-2.17.0a2/fractal_server/__init__.py +1 -0
  3. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/__init__.py +9 -0
  4. fractal_server-2.17.0a2/fractal_server/app/routes/auth/oauth.py +72 -0
  5. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/router.py +4 -2
  6. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/config/__init__.py +5 -0
  7. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/config/_main.py +0 -95
  8. fractal_server-2.17.0a2/fractal_server/config/_oauth.py +69 -0
  9. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/pyproject.toml +2 -2
  10. fractal_server-2.17.0a1/fractal_server/__init__.py +0 -1
  11. fractal_server-2.17.0a1/fractal_server/app/routes/auth/oauth.py +0 -65
  12. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/LICENSE +0 -0
  13. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/README.md +0 -0
  14. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/__main__.py +0 -0
  15. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/alembic.ini +0 -0
  16. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/__init__.py +0 -0
  17. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/db/__init__.py +0 -0
  18. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/__init__.py +0 -0
  19. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/linkusergroup.py +0 -0
  20. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/linkuserproject.py +0 -0
  21. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/security.py +0 -0
  22. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/user_settings.py +0 -0
  23. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/__init__.py +0 -0
  24. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/accounting.py +0 -0
  25. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/dataset.py +0 -0
  26. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/history.py +0 -0
  27. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/job.py +0 -0
  28. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/profile.py +0 -0
  29. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/project.py +0 -0
  30. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/resource.py +0 -0
  31. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/task.py +0 -0
  32. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/task_group.py +0 -0
  33. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/workflow.py +0 -0
  34. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/models/v2/workflowtask.py +0 -0
  35. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/__init__.py +0 -0
  36. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/__init__.py +0 -0
  37. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/__init__.py +0 -0
  38. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/_aux_functions.py +0 -0
  39. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/accounting.py +0 -0
  40. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/impersonate.py +0 -0
  41. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/job.py +0 -0
  42. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/profile.py +0 -0
  43. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/project.py +0 -0
  44. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/resource.py +0 -0
  45. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/task.py +0 -0
  46. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/task_group.py +0 -0
  47. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/admin/v2/task_group_lifecycle.py +0 -0
  48. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/__init__.py +0 -0
  49. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/_aux_functions.py +0 -0
  50. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/_aux_functions_history.py +0 -0
  51. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/_aux_functions_task_lifecycle.py +0 -0
  52. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/_aux_functions_task_version_update.py +0 -0
  53. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/_aux_functions_tasks.py +0 -0
  54. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/_aux_task_group_disambiguation.py +0 -0
  55. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/dataset.py +0 -0
  56. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/history.py +0 -0
  57. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/images.py +0 -0
  58. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/job.py +0 -0
  59. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/pre_submission_checks.py +0 -0
  60. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/project.py +0 -0
  61. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/status_legacy.py +0 -0
  62. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/submit.py +0 -0
  63. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task.py +0 -0
  64. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task_collection.py +0 -0
  65. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task_collection_custom.py +0 -0
  66. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task_collection_pixi.py +0 -0
  67. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task_group.py +0 -0
  68. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task_group_lifecycle.py +0 -0
  69. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/task_version_update.py +0 -0
  70. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/workflow.py +0 -0
  71. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/workflow_import.py +0 -0
  72. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/api/v2/workflowtask.py +0 -0
  73. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/__init__.py +0 -0
  74. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/_aux_auth.py +0 -0
  75. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/current_user.py +0 -0
  76. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/group.py +0 -0
  77. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/login.py +0 -0
  78. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/register.py +0 -0
  79. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/auth/users.py +0 -0
  80. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/aux/__init__.py +0 -0
  81. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/aux/_job.py +0 -0
  82. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/aux/_runner.py +0 -0
  83. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/aux/validate_user_profile.py +0 -0
  84. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/aux/validate_user_settings.py +0 -0
  85. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/routes/pagination.py +0 -0
  86. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/__init__.py +0 -0
  87. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/user.py +0 -0
  88. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/user_group.py +0 -0
  89. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/user_settings.py +0 -0
  90. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/__init__.py +0 -0
  91. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/accounting.py +0 -0
  92. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/dataset.py +0 -0
  93. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/dumps.py +0 -0
  94. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/history.py +0 -0
  95. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/job.py +0 -0
  96. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/manifest.py +0 -0
  97. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/profile.py +0 -0
  98. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/project.py +0 -0
  99. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/resource.py +0 -0
  100. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/status_legacy.py +0 -0
  101. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/task.py +0 -0
  102. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/task_collection.py +0 -0
  103. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/task_group.py +0 -0
  104. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/workflow.py +0 -0
  105. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/schemas/v2/workflowtask.py +0 -0
  106. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/security/__init__.py +0 -0
  107. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/security/signup_email.py +0 -0
  108. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/shutdown.py +0 -0
  109. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/app/user_settings.py +0 -0
  110. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/config/_database.py +0 -0
  111. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/config/_email.py +0 -0
  112. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/config/_init_data.py +0 -0
  113. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/config/_settings_config.py +0 -0
  114. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/data_migrations/2_14_10.py +0 -0
  115. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/data_migrations/README.md +0 -0
  116. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/data_migrations/tools.py +0 -0
  117. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/exceptions.py +0 -0
  118. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/gunicorn_fractal.py +0 -0
  119. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/images/__init__.py +0 -0
  120. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/images/models.py +0 -0
  121. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/images/status_tools.py +0 -0
  122. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/images/tools.py +0 -0
  123. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/logger.py +0 -0
  124. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/main.py +0 -0
  125. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/env.py +0 -0
  126. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/naming_convention.py +0 -0
  127. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/034a469ec2eb_task_groups.py +0 -0
  128. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/091b01f51f88_add_usergroup_and_linkusergroup_table.py +0 -0
  129. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/0f5f85bb2ae7_add_pre_pinned_packages.py +0 -0
  130. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/19eca0dd47a9_user_settings_project_dir.py +0 -0
  131. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/1a83a5260664_rename.py +0 -0
  132. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/1eac13a26c83_drop_v1_tables.py +0 -0
  133. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/316140ff7ee1_remove_usersettings_cache_dir.py +0 -0
  134. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/47351f8c7ebc_drop_dataset_filters.py +0 -0
  135. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/4c308bcaea2b_add_task_args_schema_and_task_args_.py +0 -0
  136. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/4cedeb448a53_workflowtask_foreign_keys_not_nullables.py +0 -0
  137. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/501961cfcd85_remove_link_between_v1_and_v2_tasks_.py +0 -0
  138. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/50a13d6138fd_initial_schema.py +0 -0
  139. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/5bf02391cfef_v2.py +0 -0
  140. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/70e77f1c38b0_add_applyworkflow_first_task_index_and_.py +0 -0
  141. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/71eefd1dd202_add_slurm_accounts.py +0 -0
  142. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/791ce783d3d8_add_indices.py +0 -0
  143. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/84bf0fffde30_add_dumps_to_applyworkflow.py +0 -0
  144. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/8e8f227a3e36_update_taskv2_post_2_7_0.py +0 -0
  145. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/8f79bd162e35_add_docs_info_and_docs_link_to_task_.py +0 -0
  146. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/90f6508c6379_drop_useroauth_username.py +0 -0
  147. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/94a47ea2d3ff_remove_cache_dir_slurm_user_and_slurm_.py +0 -0
  148. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/969d84257cac_add_historyrun_task_id.py +0 -0
  149. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/97f444d47249_add_applyworkflow_project_dump.py +0 -0
  150. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/981d588fe248_add_executor_error_log.py +0 -0
  151. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/99ea79d9e5d2_add_dataset_history.py +0 -0
  152. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/9c5ae74c9b98_add_user_settings_table.py +0 -0
  153. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/9db60297b8b2_set_ondelete.py +0 -0
  154. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/9fd26a2b0de4_add_workflow_timestamp_created.py +0 -0
  155. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/a7f4d6137b53_add_workflow_dump_to_applyworkflow.py +0 -0
  156. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/a80ac5a352bf_resource_profile.py +0 -0
  157. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/af1ef1c83c9b_add_accounting_tables.py +0 -0
  158. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/af8673379a5c_drop_old_filter_columns.py +0 -0
  159. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/b1e7f7a1ff71_task_group_for_pixi.py +0 -0
  160. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/b3ffb095f973_json_to_jsonb.py +0 -0
  161. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/c90a7c76e996_job_id_in_history_run.py +0 -0
  162. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/d256a7379ab8_taskgroup_activity_and_venv_info_to_.py +0 -0
  163. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/d4fe3708d309_make_applyworkflow_workflow_dump_non_.py +0 -0
  164. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/da2cb2ac4255_user_group_viewer_paths.py +0 -0
  165. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/db09233ad13a_split_filters_and_keep_old_columns.py +0 -0
  166. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/e75cac726012_make_applyworkflow_start_timestamp_not_.py +0 -0
  167. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/e81103413827_add_job_type_filters.py +0 -0
  168. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/efa89c30e0a4_add_project_timestamp_created.py +0 -0
  169. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/f37aceb45062_make_historyunit_logfile_required.py +0 -0
  170. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/f384e1c0cf5d_drop_task_default_args_columns.py +0 -0
  171. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/migrations/versions/fbce16ff4e47_new_history_items.py +0 -0
  172. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/py.typed +0 -0
  173. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/__init__.py +0 -0
  174. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/components.py +0 -0
  175. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/config/__init__.py +0 -0
  176. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/config/_local.py +0 -0
  177. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/config/_slurm.py +0 -0
  178. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/config/slurm_mem_to_MB.py +0 -0
  179. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/exceptions.py +0 -0
  180. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/__init__.py +0 -0
  181. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/base_runner.py +0 -0
  182. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/call_command_wrapper.py +0 -0
  183. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/local/__init__.py +0 -0
  184. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/local/get_local_config.py +0 -0
  185. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/local/runner.py +0 -0
  186. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/__init__.py +0 -0
  187. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/_batching.py +0 -0
  188. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/_job_states.py +0 -0
  189. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/base_slurm_runner.py +0 -0
  190. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/get_slurm_config.py +0 -0
  191. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/remote.py +0 -0
  192. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/slurm_config.py +0 -0
  193. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_common/slurm_job_task_models.py +0 -0
  194. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_ssh/__init__.py +0 -0
  195. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_ssh/run_subprocess.py +0 -0
  196. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_ssh/runner.py +0 -0
  197. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_ssh/tar_commands.py +0 -0
  198. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_sudo/__init__.py +0 -0
  199. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_sudo/_subprocess_run_as_user.py +0 -0
  200. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/executors/slurm_sudo/runner.py +0 -0
  201. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/filenames.py +0 -0
  202. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/set_start_and_last_task_index.py +0 -0
  203. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/task_files.py +0 -0
  204. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/__init__.py +0 -0
  205. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/_local.py +0 -0
  206. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/_slurm_ssh.py +0 -0
  207. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/_slurm_sudo.py +0 -0
  208. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/db_tools.py +0 -0
  209. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/deduplicate_list.py +0 -0
  210. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/merge_outputs.py +0 -0
  211. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/runner.py +0 -0
  212. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/runner_functions.py +0 -0
  213. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/submit_workflow.py +0 -0
  214. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/v2/task_interface.py +0 -0
  215. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/runner/versions.py +0 -0
  216. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/ssh/__init__.py +0 -0
  217. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/ssh/_fabric.py +0 -0
  218. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/string_tools.py +0 -0
  219. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/syringe.py +0 -0
  220. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/__init__.py +0 -0
  221. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/config/__init__.py +0 -0
  222. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/config/_pixi.py +0 -0
  223. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/config/_python.py +0 -0
  224. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/utils.py +0 -0
  225. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/__init__.py +0 -0
  226. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/__init__.py +0 -0
  227. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/_utils.py +0 -0
  228. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/collect.py +0 -0
  229. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/collect_pixi.py +0 -0
  230. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/deactivate.py +0 -0
  231. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/deactivate_pixi.py +0 -0
  232. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/delete.py +0 -0
  233. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/reactivate.py +0 -0
  234. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/local/reactivate_pixi.py +0 -0
  235. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/__init__.py +0 -0
  236. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/_pixi_slurm_ssh.py +0 -0
  237. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/_utils.py +0 -0
  238. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/collect.py +0 -0
  239. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/collect_pixi.py +0 -0
  240. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/deactivate.py +0 -0
  241. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/deactivate_pixi.py +0 -0
  242. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/delete.py +0 -0
  243. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/reactivate.py +0 -0
  244. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/ssh/reactivate_pixi.py +0 -0
  245. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/1_create_venv.sh +0 -0
  246. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/2_pip_install.sh +0 -0
  247. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/3_pip_freeze.sh +0 -0
  248. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/4_pip_show.sh +0 -0
  249. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/5_get_venv_size_and_file_number.sh +0 -0
  250. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/6_pip_install_from_freeze.sh +0 -0
  251. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/pixi_1_extract.sh +0 -0
  252. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/pixi_2_install.sh +0 -0
  253. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/templates/pixi_3_post_install.sh +0 -0
  254. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/utils_background.py +0 -0
  255. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/utils_database.py +0 -0
  256. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/utils_package_names.py +0 -0
  257. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/utils_pixi.py +0 -0
  258. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/utils_python_interpreter.py +0 -0
  259. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/tasks/v2/utils_templates.py +0 -0
  260. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/types/__init__.py +0 -0
  261. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/types/validators/__init__.py +0 -0
  262. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/types/validators/_common_validators.py +0 -0
  263. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/types/validators/_filter_validators.py +0 -0
  264. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/types/validators/_workflow_task_arguments_validators.py +0 -0
  265. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/urls.py +0 -0
  266. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/utils.py +0 -0
  267. {fractal_server-2.17.0a1 → fractal_server-2.17.0a2}/fractal_server/zip_tools.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: fractal-server
3
- Version: 2.17.0a1
3
+ Version: 2.17.0a2
4
4
  Summary: Backend component of the Fractal analytics platform
5
5
  License-Expression: BSD-3-Clause
6
6
  License-File: LICENSE
@@ -0,0 +1 @@
1
+ __VERSION__ = "2.17.0a2"
@@ -9,6 +9,7 @@ from fractal_server.app.models import UserOAuth
9
9
  from fractal_server.app.routes.auth import current_active_superuser
10
10
  from fractal_server.config import get_db_settings
11
11
  from fractal_server.config import get_email_settings
12
+ from fractal_server.config import get_oauth_settings
12
13
  from fractal_server.config import get_settings
13
14
  from fractal_server.syringe import Inject
14
15
 
@@ -45,3 +46,11 @@ async def view_email_settings(
45
46
  ):
46
47
  settings = Inject(get_email_settings)
47
48
  return settings.model_dump()
49
+
50
+
51
+ @router_api.get("/settings/oauth/")
52
+ async def view_oauth_settings(
53
+ user: UserOAuth = Depends(current_active_superuser),
54
+ ):
55
+ settings = Inject(get_oauth_settings)
56
+ return settings.model_dump()
@@ -0,0 +1,72 @@
1
+ from fastapi import APIRouter
2
+ from httpx_oauth.clients.github import GitHubOAuth2
3
+ from httpx_oauth.clients.google import GoogleOAuth2
4
+ from httpx_oauth.clients.openid import OpenID
5
+
6
+ from . import cookie_backend
7
+ from . import fastapi_users
8
+ from fractal_server.config import get_oauth_settings
9
+ from fractal_server.config import get_settings
10
+ from fractal_server.config import OAuthSettings
11
+ from fractal_server.syringe import Inject
12
+
13
+
14
+ def _create_client_github(cfg: OAuthSettings) -> GitHubOAuth2:
15
+ return GitHubOAuth2(
16
+ client_id=cfg.OAUTH_CLIENT_ID.get_secret_value(),
17
+ client_secret=cfg.OAUTH_CLIENT_SECRET.get_secret_value(),
18
+ )
19
+
20
+
21
+ def _create_client_google(cfg: OAuthSettings) -> GoogleOAuth2:
22
+ return GoogleOAuth2(
23
+ client_id=cfg.OAUTH_CLIENT_ID.get_secret_value(),
24
+ client_secret=cfg.OAUTH_CLIENT_SECRET.get_secret_value(),
25
+ )
26
+
27
+
28
+ def _create_client_oidc(cfg: OAuthSettings) -> OpenID:
29
+ return OpenID(
30
+ client_id=cfg.OAUTH_CLIENT_ID.get_secret_value(),
31
+ client_secret=cfg.OAUTH_CLIENT_SECRET.get_secret_value(),
32
+ openid_configuration_endpoint=cfg.OAUTH_OIDC_CONFIG_ENDPOINT,
33
+ )
34
+
35
+
36
+ def get_oauth_router() -> APIRouter | None:
37
+ """
38
+ Get the `APIRouter` object for OAuth endpoints.
39
+ """
40
+ router_oauth = APIRouter()
41
+ settings = Inject(get_settings)
42
+ oauth_settings = Inject(get_oauth_settings)
43
+ if not oauth_settings.is_set:
44
+ return None
45
+
46
+ client_name = oauth_settings.OAUTH_CLIENT_NAME
47
+
48
+ if client_name == "google":
49
+ client = _create_client_google(oauth_settings)
50
+ elif client_name == "github":
51
+ client = _create_client_github(oauth_settings)
52
+ else:
53
+ client = _create_client_oidc(oauth_settings)
54
+
55
+ router_oauth.include_router(
56
+ fastapi_users.get_oauth_router(
57
+ client,
58
+ cookie_backend,
59
+ settings.JWT_SECRET_KEY,
60
+ is_verified_by_default=False,
61
+ associate_by_email=True,
62
+ redirect_url=oauth_settings.OAUTH_REDIRECT_URL,
63
+ ),
64
+ prefix=f"/{client_name}",
65
+ )
66
+
67
+ # Add trailing slash to all routes' paths
68
+ for route in router_oauth.routes:
69
+ if not route.path.endswith("/"):
70
+ route.path = f"{route.path}/"
71
+
72
+ return router_oauth
@@ -3,7 +3,7 @@ from fastapi import APIRouter
3
3
  from .current_user import router_current_user
4
4
  from .group import router_group
5
5
  from .login import router_login
6
- from .oauth import router_oauth
6
+ from .oauth import get_oauth_router
7
7
  from .register import router_register
8
8
  from .users import router_users
9
9
 
@@ -14,4 +14,6 @@ router_auth.include_router(router_current_user)
14
14
  router_auth.include_router(router_login)
15
15
  router_auth.include_router(router_users)
16
16
  router_auth.include_router(router_group)
17
- router_auth.include_router(router_oauth)
17
+ router_oauth = get_oauth_router()
18
+ if router_oauth is not None:
19
+ router_auth.include_router(router_oauth)
@@ -3,6 +3,7 @@ from ._email import EmailSettings
3
3
  from ._email import PublicEmailSettings # noqa F401
4
4
  from ._init_data import InitDataSettings
5
5
  from ._main import Settings
6
+ from ._oauth import OAuthSettings
6
7
 
7
8
 
8
9
  def get_db_settings(db_settings=DatabaseSettings()) -> DatabaseSettings:
@@ -21,3 +22,7 @@ def get_init_data_settings(
21
22
  init_data_settings=InitDataSettings(),
22
23
  ) -> InitDataSettings:
23
24
  return init_data_settings
25
+
26
+
27
+ def get_oauth_settings(oauth_settings=OAuthSettings()) -> OAuthSettings:
28
+ return oauth_settings
@@ -1,12 +1,7 @@
1
1
  import logging
2
- from os import environ
3
- from os import getenv
4
2
  from typing import Literal
5
3
  from typing import TypeVar
6
4
 
7
- from pydantic import BaseModel
8
- from pydantic import Field
9
- from pydantic import model_validator
10
5
  from pydantic import SecretStr
11
6
  from pydantic_settings import BaseSettings
12
7
  from pydantic_settings import SettingsConfigDict
@@ -22,48 +17,6 @@ class FractalConfigurationError(ValueError):
22
17
  T = TypeVar("T")
23
18
 
24
19
 
25
- class OAuthClientConfig(BaseModel):
26
- """
27
- OAuth Client Config Model
28
-
29
- This model wraps the variables that define a client against an Identity
30
- Provider. As some providers are supported by the libraries used within the
31
- server, some attributes are optional.
32
-
33
- Attributes:
34
- CLIENT_NAME:
35
- The name of the client
36
- CLIENT_ID:
37
- ID of client
38
- CLIENT_SECRET:
39
- Secret to authorise against the identity provider
40
- OIDC_CONFIGURATION_ENDPOINT:
41
- OpenID configuration endpoint,
42
- allowing to discover the required endpoints automatically
43
- REDIRECT_URL:
44
- String to be used as `redirect_url` argument for
45
- `fastapi_users.get_oauth_router`, and then in
46
- `httpx_oauth.integrations.fastapi.OAuth2AuthorizeCallback`.
47
- """
48
-
49
- CLIENT_NAME: str
50
- CLIENT_ID: str
51
- CLIENT_SECRET: SecretStr
52
- OIDC_CONFIGURATION_ENDPOINT: str | None = None
53
- REDIRECT_URL: str | None = None
54
-
55
- @model_validator(mode="before")
56
- @classmethod
57
- def check_configuration(cls, values):
58
- if values.get("CLIENT_NAME") not in ["GOOGLE", "GITHUB"]:
59
- if not values.get("OIDC_CONFIGURATION_ENDPOINT"):
60
- raise FractalConfigurationError(
61
- f"Missing OAUTH_{values.get('CLIENT_NAME')}"
62
- "_OIDC_CONFIGURATION_ENDPOINT"
63
- )
64
- return values
65
-
66
-
67
20
  class Settings(BaseSettings):
68
21
  """
69
22
  Contains all the configuration variables for Fractal Server
@@ -73,8 +26,6 @@ class Settings(BaseSettings):
73
26
 
74
27
  model_config = SettingsConfigDict(**SETTINGS_CONFIG_DICT)
75
28
 
76
- OAUTH_CLIENTS_CONFIG: list[OAuthClientConfig] = Field(default_factory=list)
77
-
78
29
  # JWT TOKEN
79
30
  JWT_EXPIRE_SECONDS: int = 180
80
31
  """
@@ -95,52 +46,6 @@ class Settings(BaseSettings):
95
46
  Cookie token lifetime, in seconds.
96
47
  """
97
48
 
98
- @model_validator(mode="before")
99
- @classmethod
100
- def collect_oauth_clients(cls, values):
101
- """
102
- Automatic collection of OAuth Clients
103
-
104
- This method collects the environment variables relative to a single
105
- OAuth client and saves them within the `Settings` object in the form
106
- of an `OAuthClientConfig` instance.
107
-
108
- Fractal can support an arbitrary number of OAuth providers, which are
109
- automatically detected by parsing the environment variable names. In
110
- particular, to set the provider `FOO`, one must specify the variables
111
-
112
- OAUTH_FOO_CLIENT_ID
113
- OAUTH_FOO_CLIENT_SECRET
114
- ...
115
-
116
- etc (cf. OAuthClientConfig).
117
- """
118
- oauth_env_variable_keys = [
119
- key for key in environ.keys() if key.startswith("OAUTH_")
120
- ]
121
- clients_available = {
122
- var.split("_")[1] for var in oauth_env_variable_keys
123
- }
124
-
125
- values["OAUTH_CLIENTS_CONFIG"] = []
126
- for client in clients_available:
127
- prefix = f"OAUTH_{client}"
128
- oauth_client_config = OAuthClientConfig(
129
- CLIENT_NAME=client,
130
- CLIENT_ID=getenv(f"{prefix}_CLIENT_ID", None),
131
- CLIENT_SECRET=getenv(f"{prefix}_CLIENT_SECRET", None),
132
- OIDC_CONFIGURATION_ENDPOINT=getenv(
133
- f"{prefix}_OIDC_CONFIGURATION_ENDPOINT", None
134
- ),
135
- REDIRECT_URL=getenv(f"{prefix}_REDIRECT_URL", None),
136
- )
137
- values["OAUTH_CLIENTS_CONFIG"].append(oauth_client_config)
138
- return values
139
-
140
- ###########################################################################
141
- # FRACTAL SPECIFIC
142
- ###########################################################################
143
-
144
49
  # Note: we do not use ResourceType here to avoid circular imports
145
50
  FRACTAL_RUNNER_BACKEND: Literal[
146
51
  "local", "slurm_ssh", "slurm_sudo"
@@ -0,0 +1,69 @@
1
+ from typing import Annotated
2
+ from typing import Self
3
+
4
+ from pydantic import model_validator
5
+ from pydantic import SecretStr
6
+ from pydantic import StringConstraints
7
+ from pydantic_settings import BaseSettings
8
+ from pydantic_settings import SettingsConfigDict
9
+
10
+ from ._settings_config import SETTINGS_CONFIG_DICT
11
+ from fractal_server.types import NonEmptyStr
12
+
13
+
14
+ class OAuthSettings(BaseSettings):
15
+ """
16
+ Minimal set of configurations needed for operating on the database (e.g
17
+ for schema migrations).
18
+ """
19
+
20
+ model_config = SettingsConfigDict(**SETTINGS_CONFIG_DICT)
21
+
22
+ OAUTH_CLIENT_NAME: (
23
+ Annotated[
24
+ NonEmptyStr,
25
+ StringConstraints(to_lower=True),
26
+ ]
27
+ | None
28
+ ) = None
29
+ """
30
+ The name of the client.
31
+ """
32
+ OAUTH_CLIENT_ID: SecretStr | None = None
33
+ """
34
+ ID of client.
35
+ """
36
+ OAUTH_CLIENT_SECRET: SecretStr | None = None
37
+ """
38
+ Secret to authorise against the identity provider.
39
+ """
40
+ OAUTH_OIDC_CONFIG_ENDPOINT: str | None = None
41
+ """
42
+ OpenID configuration endpoint, for autodiscovery of relevant endpoints.
43
+ """
44
+ OAUTH_REDIRECT_URL: str | None = None
45
+ """
46
+ String to be used as `redirect_url` argument in
47
+ `fastapi_users.get_oauth_router`, and then in
48
+ `httpx_oauth.integrations.fastapi.OAuth2AuthorizeCallback`
49
+ """
50
+
51
+ @model_validator(mode="after")
52
+ def check_configuration(self: Self) -> Self:
53
+ if (
54
+ self.OAUTH_CLIENT_NAME not in ["google", "github", None]
55
+ and self.OAUTH_OIDC_CONFIG_ENDPOINT is None
56
+ ):
57
+ raise ValueError(
58
+ f"{self.OAUTH_OIDC_CONFIG_ENDPOINT=} but "
59
+ f"{self.OAUTH_CLIENT_NAME=}"
60
+ )
61
+ return self
62
+
63
+ @property
64
+ def is_set(self) -> bool:
65
+ return None not in (
66
+ self.OAUTH_CLIENT_NAME,
67
+ self.OAUTH_CLIENT_ID,
68
+ self.OAUTH_CLIENT_SECRET,
69
+ )
@@ -1,6 +1,6 @@
1
1
  [project]
2
2
  name = "fractal-server"
3
- version = "2.17.0a1"
3
+ version = "2.17.0a2"
4
4
  description = "Backend component of the Fractal analytics platform"
5
5
  authors = [
6
6
  { name="Tommaso Comparin", email="tommaso.comparin@exact-lab.it" },
@@ -96,7 +96,7 @@ filterwarnings = [
96
96
  markers = ["container", "ssh", "fails_on_macos"]
97
97
 
98
98
  [tool.bumpver]
99
- current_version = "2.17.0a1"
99
+ current_version = "2.17.0a2"
100
100
  version_pattern = "MAJOR.MINOR.PATCH[PYTAGNUM]"
101
101
  commit_message = "bump version {old_version} -> {new_version}"
102
102
  commit = true
@@ -1 +0,0 @@
1
- __VERSION__ = "2.17.0a1"
@@ -1,65 +0,0 @@
1
- from fastapi import APIRouter
2
-
3
- from . import cookie_backend
4
- from . import fastapi_users
5
- from ....config import get_settings
6
- from ....syringe import Inject
7
-
8
- router_oauth = APIRouter()
9
-
10
-
11
- # OAUTH CLIENTS
12
-
13
- # NOTE: settings.OAUTH_CLIENTS are collected by
14
- # Settings.collect_oauth_clients(). If no specific client is specified in the
15
- # environment variables (e.g. by setting OAUTH_FOO_CLIENT_ID and
16
- # OAUTH_FOO_CLIENT_SECRET), this list is empty
17
-
18
- # Note: dependency injection should be wrapped within a function call to make
19
- # it truly lazy. This function could then be called on startup of the FastAPI
20
- # app (cf. fractal_server.main)
21
- settings = Inject(get_settings)
22
-
23
- for client_config in settings.OAUTH_CLIENTS_CONFIG:
24
- client_name = client_config.CLIENT_NAME.lower()
25
-
26
- if client_name == "google":
27
- from httpx_oauth.clients.google import GoogleOAuth2
28
-
29
- client = GoogleOAuth2(
30
- client_config.CLIENT_ID,
31
- client_config.CLIENT_SECRET.get_secret_value(),
32
- )
33
- elif client_name == "github":
34
- from httpx_oauth.clients.github import GitHubOAuth2
35
-
36
- client = GitHubOAuth2(
37
- client_config.CLIENT_ID,
38
- client_config.CLIENT_SECRET.get_secret_value(),
39
- )
40
- else:
41
- from httpx_oauth.clients.openid import OpenID
42
-
43
- client = OpenID(
44
- client_config.CLIENT_ID,
45
- client_config.CLIENT_SECRET.get_secret_value(),
46
- client_config.OIDC_CONFIGURATION_ENDPOINT,
47
- )
48
-
49
- router_oauth.include_router(
50
- fastapi_users.get_oauth_router(
51
- client,
52
- cookie_backend,
53
- settings.JWT_SECRET_KEY,
54
- is_verified_by_default=False,
55
- associate_by_email=True,
56
- redirect_url=client_config.REDIRECT_URL,
57
- ),
58
- prefix=f"/{client_name}",
59
- )
60
-
61
-
62
- # Add trailing slash to all routes' paths
63
- for route in router_oauth.routes:
64
- if not route.path.endswith("/"):
65
- route.path = f"{route.path}/"