fountain-life-service-clients 3.34.2__tar.gz → 3.35.0__tar.gz

{fountain_life_service_clients-3.34.2 → fountain_life_service_clients-3.35.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: fountain-life-service-clients
-Version: 3.34.2
+Version: 3.35.0
 Summary: 
 License: UNLICENSED
 Author: Fountain Life

fountain_life_service_clients-3.35.0/fountain_life_service_clients/ga4gh_service.py

@@ -0,0 +1,34 @@
+# This file was generated automatically. Do not edit it directly.
+from typing import List, NotRequired, TypedDict, Unpack, cast
+from urllib.parse import quote
+
+from fountain_life_service_clients._base_client import (
+    AlphaConfig,
+    AlphaResponse,
+    BaseClient,
+)
+
+
+class Sample(TypedDict):
+    sampleId: str
+    patientId: NotRequired[str]
+
+
+class GetVariantSetResponse(TypedDict):
+    id: str
+    datasetId: str
+    patientId: NotRequired[str]
+    samples: NotRequired[List[Sample]]
+
+
+class Ga4ghServiceClient(BaseClient):
+    def __init__(self, **cfg: Unpack[AlphaConfig]):
+        kwargs = {"target": "lambda://ga4gh-service:deployed", **(cfg or {})}
+        super().__init__(**kwargs)
+
+    async def get_variant_set(self, account: str, id: str):
+        """Get a variant set by id"""
+        res = await self.client.request(
+            path=f"/{quote(account)}/v1/variantsets/{quote(id)}", method="GET"
+        )
+        return cast(AlphaResponse[GetVariantSetResponse], res)

{fountain_life_service_clients-3.34.2 → fountain_life_service_clients-3.35.0}/fountain_life_service_clients/genomics_service.py

@@ -9,7 +9,6 @@ from typing import (
     Unpack,
     cast,
 )
-from urllib.parse import quote
 
 from fountain_life_service_clients._base_client import (
     AlphaConfig,
@@ -17,19 +16,6 @@ from fountain_life_service_clients._base_client import (
     BaseClient,
 )
 
-
-class Sample(TypedDict):
-    sampleId: str
-    patientId: NotRequired[str]
-
-
-class GetVariantSetResponse(TypedDict):
-    id: str
-    datasetId: str
-    patientId: NotRequired[str]
-    samples: NotRequired[List[Sample]]
-
-
 SearchVariantsRequest = TypedDict(
     "SearchVariantsRequest",
     {
@@ -212,13 +198,6 @@ class GenomicsServiceClient(BaseClient):
         kwargs = {"target": "lambda://genomics-service:deployed", **(cfg or {})}
         super().__init__(**kwargs)
 
-    async def get_variant_set(self, id: str):
-        """Get a variant set by id"""
-        res = await self.client.request(
-            path=f"/v1/genomics/variantsets/{quote(id)}", method="GET"
-        )
-        return cast(AlphaResponse[GetVariantSetResponse], res)
-
     async def search_variants(self, body: SearchVariantsRequest):
         """Search for variants"""
         res = await self.client.request(

{fountain_life_service_clients-3.34.2 → fountain_life_service_clients-3.35.0}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "fountain-life-service-clients"
-version = "3.34.2"
+version = "3.35.0"
 description = ""
 authors = ["Fountain Life <dev@fountainlife.com>"]
 license = "UNLICENSED"