flexynesis 0.2.7__tar.gz → 0.2.8__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (32) hide show
  1. {flexynesis-0.2.7 → flexynesis-0.2.8}/PKG-INFO +28 -2
  2. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis.egg-info/PKG-INFO +28 -2
  3. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis.egg-info/SOURCES.txt +1 -1
  4. {flexynesis-0.2.7 → flexynesis-0.2.8}/pyproject.toml +1 -1
  5. /flexynesis-0.2.7/LICENCE → /flexynesis-0.2.8/LICENSE +0 -0
  6. {flexynesis-0.2.7 → flexynesis-0.2.8}/README.md +0 -0
  7. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/__init__.py +0 -0
  8. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/__main__.py +0 -0
  9. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/cli.py +0 -0
  10. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/config.py +0 -0
  11. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/data.py +0 -0
  12. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/feature_selection.py +0 -0
  13. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/main.py +0 -0
  14. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/__init__.py +0 -0
  15. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/crossmodal_pred.py +0 -0
  16. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/direct_pred.py +0 -0
  17. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/gnn_early.py +0 -0
  18. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/on_ice/direct_pred_cnn.py +0 -0
  19. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/on_ice/direct_pred_gcnn.py +0 -0
  20. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/on_ice/modules_on_ice.py +0 -0
  21. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/supervised_vae.py +0 -0
  22. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/models/triplet_encoder.py +0 -0
  23. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/modules.py +0 -0
  24. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis/utils.py +0 -0
  25. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis.egg-info/dependency_links.txt +0 -0
  26. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis.egg-info/entry_points.txt +0 -0
  27. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis.egg-info/requires.txt +0 -0
  28. {flexynesis-0.2.7 → flexynesis-0.2.8}/flexynesis.egg-info/top_level.txt +0 -0
  29. {flexynesis-0.2.7 → flexynesis-0.2.8}/setup.cfg +0 -0
  30. {flexynesis-0.2.7 → flexynesis-0.2.8}/tests/__init__.py +0 -0
  31. {flexynesis-0.2.7 → flexynesis-0.2.8}/tests/unit/__init__.py +0 -0
  32. {flexynesis-0.2.7 → flexynesis-0.2.8}/tests/unit/test_smoke.py +0 -0
@@ -1,15 +1,41 @@
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  Metadata-Version: 2.1
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  Name: flexynesis
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- Version: 0.2.7
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+ Version: 0.2.8
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  Summary: A deep-learning based multi-omics bulk sequencing data integration suite with a focus on (pre-)clinical endpoint prediction.
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  Author-email: Bora Uyar <bora.uyar@mdc-berlin.de>, Taras Savchyn <Taras.Savchyn@mdc-berlin.de>, Ricardo Wurmus <Ricardo.Wurmus@mdc-berlin.de>, Ahmet Sarigun <Ahmet.Sariguen@mdc-berlin.de>
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+ License: ```txt
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+ Modified MIT License for Academic and Non-Commercial Use
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software for academic, research, and educational purposes without
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+ restriction, including without limitation the rights to use, copy, modify,
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+ merge, publish, and distribute copies of the Software, and to permit persons
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+ to whom the Software is furnished to do so, subject to the following conditions:
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+
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+ Commercial use of this software or any derivative works is prohibited without
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+ explicit permission and a separate commercial license from the copyright holders.
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
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+
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+ ```
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+
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  Project-URL: homepage, https://github.com/BIMSBbioinfo/flexynesis
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  Classifier: Development Status :: 3 - Alpha
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  Classifier: Intended Audience :: Developers
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  Classifier: Programming Language :: Python :: 3.11
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  Requires-Python: <3.12,>=3.11
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  Description-Content-Type: text/markdown
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- License-File: LICENCE
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+ License-File: LICENSE
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  Requires-Dist: matplotlib
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  Requires-Dist: numpy
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  Requires-Dist: pandas
@@ -1,15 +1,41 @@
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  Metadata-Version: 2.1
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  Name: flexynesis
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- Version: 0.2.7
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+ Version: 0.2.8
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  Summary: A deep-learning based multi-omics bulk sequencing data integration suite with a focus on (pre-)clinical endpoint prediction.
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  Author-email: Bora Uyar <bora.uyar@mdc-berlin.de>, Taras Savchyn <Taras.Savchyn@mdc-berlin.de>, Ricardo Wurmus <Ricardo.Wurmus@mdc-berlin.de>, Ahmet Sarigun <Ahmet.Sariguen@mdc-berlin.de>
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+ License: ```txt
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+ Modified MIT License for Academic and Non-Commercial Use
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
10
+ of this software and associated documentation files (the "Software"), to deal
11
+ in the Software for academic, research, and educational purposes without
12
+ restriction, including without limitation the rights to use, copy, modify,
13
+ merge, publish, and distribute copies of the Software, and to permit persons
14
+ to whom the Software is furnished to do so, subject to the following conditions:
15
+
16
+ Commercial use of this software or any derivative works is prohibited without
17
+ explicit permission and a separate commercial license from the copyright holders.
18
+
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+ The above copyright notice and this permission notice shall be included in all
20
+ copies or substantial portions of the Software.
21
+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
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+
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+ ```
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+
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  Project-URL: homepage, https://github.com/BIMSBbioinfo/flexynesis
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  Classifier: Development Status :: 3 - Alpha
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  Classifier: Intended Audience :: Developers
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  Classifier: Programming Language :: Python :: 3.11
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  Requires-Python: <3.12,>=3.11
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  Description-Content-Type: text/markdown
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- License-File: LICENCE
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+ License-File: LICENSE
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  Requires-Dist: matplotlib
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  Requires-Dist: numpy
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  Requires-Dist: pandas
@@ -1,4 +1,4 @@
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- LICENCE
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+ LICENSE
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  README.md
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  pyproject.toml
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  flexynesis/__init__.py
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "flexynesis"
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- version = "0.2.7"
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+ version = "0.2.8"
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  license = {file = "LICENSE"}
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  authors = [
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  {name = "Bora Uyar", email = "bora.uyar@mdc-berlin.de"},
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