fits2tmp 0.3.0__tar.gz → 1.0.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/PKG-INFO +12 -13
- fits2tmp-1.0.0/pyproject.toml +38 -0
- fits2tmp-1.0.0/pyproject.toml.orig +37 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/fits2tmp.py +3 -4
- fits2tmp-0.3.0/LICENSE +0 -28
- fits2tmp-0.3.0/pyproject.toml +0 -27
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/README.md +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/__init__.py +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/dask-output.log +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/sdc2_100.fits +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/sofiatestrewrite1002_cat.txt +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/sofiatestrewrite1002_cat.xml +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/sofiatestrewrite100_cat.txt +0 -0
- {fits2tmp-0.3.0 → fits2tmp-1.0.0}/src/fits2tmp/sofiatestrewrite100_cat.xml +0 -0
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Metadata-Version: 2.
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Metadata-Version: 2.4
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Name: fits2tmp
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Version: 0.
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Version: 1.0.0
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Summary: A way of loading FITS files into temporary filesystems to make them available in memory.
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License: BSD-3-Clause
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Author: Verity Allan
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Author-email: vla22@cam.ac.uk
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Classifier: License :: OSI Approved :: BSD License
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Author-email: Verity Allan <vla22@cam.ac.uk>
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License-Expression: BSD-3-Clause
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Classifier: Programming Language :: Python :: 3
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Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Requires-Dist: dask[distributed]
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Requires-Dist:
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Requires-Dist:
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Requires-Dist:
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Requires-Dist:
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Classifier: Programming Language :: Python :: 3.14
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Requires-Dist: dask[distributed]>=2025.1.0,<2026
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Requires-Dist: astropy>=6.1.4,<7
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Requires-Dist: h5py>=3.16.0
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Requires-Dist: numpy>=2.1.2,<3
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Requires-Dist: pytest>=8.3.3,<9
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Requires-Dist: zarr>=3.4.1
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Requires-Python: >=3.12, <4
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Project-URL: Repository, https://gitlab.developers.cam.ac.uk/phy/ra/vla22-phd/fits2tmp
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Description-Content-Type: text/markdown
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@@ -47,4 +47,3 @@ import fits2tmp as f2t
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a = fakefits2tmpfiles("fits", "/path/to/input/data", "/path/to/temporary/filesystem", "path/to/header/", (100, 100, 100), chunks=(20,20,20))
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```
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@@ -0,0 +1,38 @@
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[project]
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name = "fits2tmp"
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version = "1.0.0"
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description = "A way of loading FITS files into temporary filesystems to make them available in memory."
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requires-python = ">=3.12,<4"
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readme = "README.md"
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license = "BSD-3-Clause"
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classifiers = [
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"Programming Language :: Python :: 3",
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"Programming Language :: Python :: 3.10",
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"Programming Language :: Python :: 3.11",
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"Programming Language :: Python :: 3.12",
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"Programming Language :: Python :: 3.13",
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"Programming Language :: Python :: 3.14",
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]
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dependencies = [
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"dask[distributed]>=2025.1.0,<2026",
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"astropy>=6.1.4,<7",
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"h5py>=3.16.0",
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"numpy>=2.1.2,<3",
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"pytest>=8.3.3,<9",
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"zarr>=3.4.1",
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]
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[[project.authors]]
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name = "Verity Allan"
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email = "vla22@cam.ac.uk"
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[project.urls]
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Repository = "https://gitlab.developers.cam.ac.uk/phy/ra/vla22-phd/fits2tmp"
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[build-system]
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requires = ["uv_build>=0.13.5,<0.14.0"]
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build-backend = "uv_build"
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[tool.pytest.ini_options]
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addopts = ["--import-mode=importlib"]
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pythonpath = "src/fits2tmp/"
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[project]
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name = "fits2tmp"
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version = "1.0.0"
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description = "A way of loading FITS files into temporary filesystems to make them available in memory."
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authors = [{ name = "Verity Allan", email = "vla22@cam.ac.uk" }]
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requires-python = ">=3.12,<4"
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readme = "README.md"
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license = "BSD-3-Clause"
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classifiers = [
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"Programming Language :: Python :: 3",
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"Programming Language :: Python :: 3.10",
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"Programming Language :: Python :: 3.11",
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"Programming Language :: Python :: 3.12",
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"Programming Language :: Python :: 3.13",
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"Programming Language :: Python :: 3.14",
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]
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dependencies = [
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"dask[distributed]>=2025.1.0,<2026",
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"astropy>=6.1.4,<7",
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"h5py>=3.16.0",
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"numpy>=2.1.2,<3",
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"pytest>=8.3.3,<9",
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"zarr>=3.4.1",
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]
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[project.urls]
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Repository = "https://gitlab.developers.cam.ac.uk/phy/ra/vla22-phd/fits2tmp"
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[build-system]
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requires = ["uv_build>=0.13.5,<0.14.0"]
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build-backend = "uv_build"
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[tool.pytest.ini_options]
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addopts = [
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"--import-mode=importlib",
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]
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pythonpath = "src/fits2tmp/"
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@@ -46,9 +46,9 @@ def file2dict(input_file, filepath) -> dict:
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with open(filepath, 'r') as j:
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contents = json.loads(j.read())
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return contents
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filepath = []
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#filepath = []
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def fun(darr, destination, header, block_info=None):
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def fun(darr, destination, header, block_info=None, filepath=[]):
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arr_loc = block_info[None]['array-location']
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print(arr_loc)
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ch_size = block_info[None]['chunk-shape']
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@@ -107,7 +107,7 @@ def disk2dah(filetype, inputpath, destination, headerloc, arraysize, chunks=None
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raise ValueError("The specified file type is not supported by fits2tmp.")
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return [d, destination, n_header, wcs_obj]
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def fakefits2tmpfiles(filetype, inputpath, destination, arraysize, headerloc=None, chunks=None, overlap=None):
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def fakefits2tmpfiles(filetype, inputpath, destination, arraysize, headerloc=None, chunks=None, overlap=None, fpaths=[]):
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inputarray = disk2dah(filetype, inputpath, destination, headerloc, arraysize, chunks)
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if overlap == None:
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overlap = [0,0,0]
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print(len(darr.chunks))
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# why am I pushing this array to delayed? ans: to parallelise construction of the list
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#dd = darr.to_delayed()
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fpaths = []
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for i in range(len(darr.chunks[0])):
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x = i * chunks[0] - overlap[0]
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x_delt = (i* chunks[0]) + chunks[0] + overlap[0]
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fits2tmp-0.3.0/LICENSE
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BSD 3-Clause License
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Copyright (c) 2024, Verity Allan
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Redistribution and use in source and binary forms, with or without
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modification, are permitted provided that the following conditions are met:
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1. Redistributions of source code must retain the above copyright notice, this
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list of conditions and the following disclaimer.
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2. Redistributions in binary form must reproduce the above copyright notice,
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this list of conditions and the following disclaimer in the documentation
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and/or other materials provided with the distribution.
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3. Neither the name of the copyright holder nor the names of its
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contributors may be used to endorse or promote products derived from
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this software without specific prior written permission.
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
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DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
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FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
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DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
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SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
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CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
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OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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fits2tmp-0.3.0/pyproject.toml
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[tool.poetry]
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name = "fits2tmp"
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version = "0.3.0"
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description = "A way of loading FITS files into temporary filesystems to make them available in memory."
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license = "BSD-3-Clause"
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authors = ["Verity Allan <vla22@cam.ac.uk>"]
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readme = "README.md"
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repository = "https://gitlab.developers.cam.ac.uk/phy/ra/vla22-phd/fits2tmp"
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[tool.poetry.dependencies]
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python = "^3.10"
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dask = {extras = ["distributed"], version = "^2025.1.0"}
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astropy = "^6.1.4"
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h5py = "^3.12.1"
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numpy = "^2.1.2"
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pytest = "^8.3.3"
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zarr = "^2.18.3"
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addopts = [
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"--import-mode=importlib",
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pythonpath = "src/fits2tmp/"
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requires = ["poetry-core"]
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build-backend = "poetry.core.masonry.api"
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