firecloud 0.16.40__tar.gz → 0.16.41__tar.gz

{firecloud-0.16.40 → firecloud-0.16.41}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: firecloud
-Version: 0.16.40
+Version: 0.16.41
 Summary: Firecloud API bindings and FISS CLI
 Home-page: https://github.com/broadinstitute/fiss
 Author: Broad Institute CGA Genome Data Analysis Center

firecloud-0.16.41/firecloud/__about__.py

@@ -0,0 +1,2 @@
+# Package version
+__version__ = "0.16.41"

{firecloud-0.16.40 → firecloud-0.16.41}/firecloud/api.py

@@ -1191,7 +1191,8 @@ def create_submission(wnamespace, workspace, cnamespace, config,
                       entity=None, etype=None, expression=None,
                       use_callcache=True, delete_intermediate_output_files=False,
                       use_reference_disks=False, memory_retry_multiplier=0,
-                      workflow_failure_mode="", user_comment=""):
+                      workflow_failure_mode="", user_comment="",
+                      per_workflow_cost_cap=None):
     """Submit job in FireCloud workspace.
 
     Args:
@@ -1225,6 +1226,8 @@ def create_submission(wnamespace, workspace, cnamespace, config,
             for more information.
         user_comment: Freeform user defined description, optional (max length
             1000 characters)
+        per_workflow_cost_cap (float): A cost threshold in USD to apply to individual
+            workflows. When the estimated cost is exceeded, the workflow is terminated.
 
     Swagger:
         https://api.firecloud.org/#!/Submissions/createSubmission
@@ -1254,6 +1257,9 @@ def create_submission(wnamespace, workspace, cnamespace, config,
     
     if memory_retry_multiplier:
         body['memoryRetryMultiplier'] = memory_retry_multiplier
+
+    if per_workflow_cost_cap:
+        body['perWorkflowCostCap'] = per_workflow_cost_cap
     
     if workflow_failure_mode:
         body['workflowFailureMode'] = workflow_failure_mode

{firecloud-0.16.40 → firecloud-0.16.41}/firecloud/fiss.py

@@ -610,7 +610,7 @@ def config_start(args):
                                args.expression, cache, 
                                args.delete_intermediates, args.ref_disks,
                                args.mem_retry_multiplier, args.failure_mode,
-                               args.user_comment)
+                               args.user_comment, args.per_workflow_cost_cap)
     fapi._check_response_code(r, 201)
     id = r.json()['submissionId']
 
@@ -2815,6 +2815,10 @@ def main(argv=None):
                       'this amount. See Cromwell docs ' +
                       '(https://cromwell.readthedocs.io/en/develop/cromwell_features/RetryWithMoreMemory)' +
                       ' for more information.')
+    subp.add_argument('-P', '--per_workflow_cost_cap', type=float,
+                      help='A cost threshold in USD to apply to individual ' +
+                      'workflows. When the estimated cost is exceeded, the ' +
+                      'workflow is terminated.')
     subp.add_argument('-f', '--failure_mode',
                       choices=['NoNewCalls', 'ContinueWhilePossible'],
                       help='What happens after a task fails. Defaults to ' +

{firecloud-0.16.40 → firecloud-0.16.41}/firecloud.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: firecloud
-Version: 0.16.40
+Version: 0.16.41
 Summary: Firecloud API bindings and FISS CLI
 Home-page: https://github.com/broadinstitute/fiss
 Author: Broad Institute CGA Genome Data Analysis Center

firecloud-0.16.40/firecloud/__about__.py

@@ -1,2 +0,0 @@
-# Package version
-__version__ = "0.16.40"