fastloess 0.1.0__tar.gz

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Files changed (39) hide show
  1. fastloess-0.1.0/CHANGELOG.md +12 -0
  2. fastloess-0.1.0/Cargo.lock +551 -0
  3. fastloess-0.1.0/Cargo.toml +54 -0
  4. fastloess-0.1.0/LICENSE-APACHE +201 -0
  5. fastloess-0.1.0/LICENSE-MIT +21 -0
  6. fastloess-0.1.0/PKG-INFO +416 -0
  7. fastloess-0.1.0/README.md +384 -0
  8. fastloess-0.1.0/docs/build/html/_images/confidence_vs_prediction_intervals.svg +107 -0
  9. fastloess-0.1.0/docs/build/html/_images/degree_comparison.svg +1225 -0
  10. fastloess-0.1.0/docs/build/html/_images/fraction_comparison.svg +1602 -0
  11. fastloess-0.1.0/docs/build/html/_images/fraction_effect_comparison.svg +185 -0
  12. fastloess-0.1.0/docs/build/html/_images/intervals_comparison.svg +1525 -0
  13. fastloess-0.1.0/docs/build/html/_images/loess_concept.svg +738 -0
  14. fastloess-0.1.0/docs/build/html/_images/lowess_smoothing_concept.svg +88 -0
  15. fastloess-0.1.0/docs/build/html/_images/multivariate_loess.svg +601 -0
  16. fastloess-0.1.0/docs/build/html/_images/robust_vs_standard_lowess.svg +147 -0
  17. fastloess-0.1.0/docs/build/html/_static/css/fonts/fontawesome-webfont.svg +2671 -0
  18. fastloess-0.1.0/docs/build/html/_static/images/confidence_vs_prediction_intervals.svg +107 -0
  19. fastloess-0.1.0/docs/build/html/_static/images/degree_comparison.svg +1225 -0
  20. fastloess-0.1.0/docs/build/html/_static/images/fraction_comparison.svg +1602 -0
  21. fastloess-0.1.0/docs/build/html/_static/images/fraction_effect_comparison.svg +185 -0
  22. fastloess-0.1.0/docs/build/html/_static/images/intervals_comparison.svg +1525 -0
  23. fastloess-0.1.0/docs/build/html/_static/images/loess_concept.svg +738 -0
  24. fastloess-0.1.0/docs/build/html/_static/images/lowess_smoothing_concept.svg +88 -0
  25. fastloess-0.1.0/docs/build/html/_static/images/multivariate_loess.svg +601 -0
  26. fastloess-0.1.0/docs/build/html/_static/images/robust_vs_standard_lowess.svg +147 -0
  27. fastloess-0.1.0/docs/build/html/_static/images/robustness_comparison.svg +815 -0
  28. fastloess-0.1.0/docs/source/_static/images/degree_comparison.svg +1225 -0
  29. fastloess-0.1.0/docs/source/_static/images/fraction_comparison.svg +1602 -0
  30. fastloess-0.1.0/docs/source/_static/images/intervals_comparison.svg +1525 -0
  31. fastloess-0.1.0/docs/source/_static/images/loess_concept.svg +738 -0
  32. fastloess-0.1.0/docs/source/_static/images/multivariate_loess.svg +601 -0
  33. fastloess-0.1.0/docs/source/_static/images/robustness_comparison.svg +815 -0
  34. fastloess-0.1.0/fastloess/__init__.py +449 -0
  35. fastloess-0.1.0/fastloess/__init__.pyi +117 -0
  36. fastloess-0.1.0/fastloess/__version__.py +1 -0
  37. fastloess-0.1.0/fastloess/py.typed +1 -0
  38. fastloess-0.1.0/pyproject.toml +49 -0
  39. fastloess-0.1.0/src/lib.rs +1002 -0
fastloess-0.1.0/CHANGELOG.md ADDED
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+ # Changelog
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+
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+ All notable changes to this package will be documented in this file.
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+
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+ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
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+ and this package adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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+
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+ ## [0.1.0]
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+
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+ ### Added
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+
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+ - Added the python binding for `fastLoess`.
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+ "once_cell",
388
+ "portable-atomic",
389
+ "pyo3-build-config",
390
+ "pyo3-ffi",
391
+ "pyo3-macros",
392
+ "unindent",
393
+ ]
394
+
395
+ [[package]]
396
+ name = "pyo3-build-config"
397
+ version = "0.27.2"
398
+ source = "registry+https://github.com/rust-lang/crates.io-index"
399
+ checksum = "b455933107de8642b4487ed26d912c2d899dec6114884214a0b3bb3be9261ea6"
400
+ dependencies = [
401
+ "target-lexicon",
402
+ ]
403
+
404
+ [[package]]
405
+ name = "pyo3-ffi"
406
+ version = "0.27.2"
407
+ source = "registry+https://github.com/rust-lang/crates.io-index"
408
+ checksum = "1c85c9cbfaddf651b1221594209aed57e9e5cff63c4d11d1feead529b872a089"
409
+ dependencies = [
410
+ "libc",
411
+ "pyo3-build-config",
412
+ ]
413
+
414
+ [[package]]
415
+ name = "pyo3-macros"
416
+ version = "0.27.2"
417
+ source = "registry+https://github.com/rust-lang/crates.io-index"
418
+ checksum = "0a5b10c9bf9888125d917fb4d2ca2d25c8df94c7ab5a52e13313a07e050a3b02"
419
+ dependencies = [
420
+ "proc-macro2",
421
+ "pyo3-macros-backend",
422
+ "quote",
423
+ "syn",
424
+ ]
425
+
426
+ [[package]]
427
+ name = "pyo3-macros-backend"
428
+ version = "0.27.2"
429
+ source = "registry+https://github.com/rust-lang/crates.io-index"
430
+ checksum = "03b51720d314836e53327f5871d4c0cfb4fb37cc2c4a11cc71907a86342c40f9"
431
+ dependencies = [
432
+ "heck",
433
+ "proc-macro2",
434
+ "pyo3-build-config",
435
+ "quote",
436
+ "syn",
437
+ ]
438
+
439
+ [[package]]
440
+ name = "quote"
441
+ version = "1.0.43"
442
+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "dc74d9a594b72ae6656596548f56f667211f8a97b3d4c3d467150794690dc40a"
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+ dependencies = [
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+ "proc-macro2",
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+ ]
447
+
448
+ [[package]]
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+ name = "rawpointer"
450
+ version = "0.2.1"
451
+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "60a357793950651c4ed0f3f52338f53b2f809f32d83a07f72909fa13e4c6c1e3"
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+
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+ [[package]]
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+ name = "rayon"
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+ version = "1.11.0"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "368f01d005bf8fd9b1206fb6fa653e6c4a81ceb1466406b81792d87c5677a58f"
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+ dependencies = [
460
+ "either",
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+ "rayon-core",
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+ ]
463
+
464
+ [[package]]
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+ name = "rayon-core"
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+ version = "1.13.0"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "22e18b0f0062d30d4230b2e85ff77fdfe4326feb054b9783a3460d8435c8ab91"
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+ dependencies = [
470
+ "crossbeam-deque",
471
+ "crossbeam-utils",
472
+ ]
473
+
474
+ [[package]]
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+ name = "rustc-hash"
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+ version = "2.1.1"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "357703d41365b4b27c590e3ed91eabb1b663f07c4c084095e60cbed4362dff0d"
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+
480
+ [[package]]
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+ name = "rustversion"
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+ version = "1.0.22"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "b39cdef0fa800fc44525c84ccb54a029961a8215f9619753635a9c0d2538d46d"
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+
486
+ [[package]]
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+ name = "safe_arch"
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+ version = "0.7.4"
489
+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "96b02de82ddbe1b636e6170c21be622223aea188ef2e139be0a5b219ec215323"
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+ dependencies = [
492
+ "bytemuck",
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+ ]
494
+
495
+ [[package]]
496
+ name = "simba"
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+ version = "0.9.1"
498
+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "c99284beb21666094ba2b75bbceda012e610f5479dfcc2d6e2426f53197ffd95"
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+ dependencies = [
501
+ "approx",
502
+ "num-complex",
503
+ "num-traits",
504
+ "paste",
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+ "wide",
506
+ ]
507
+
508
+ [[package]]
509
+ name = "syn"
510
+ version = "2.0.113"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "678faa00651c9eb72dd2020cbdf275d92eccb2400d568e419efdd64838145cb4"
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+ dependencies = [
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+ "proc-macro2",
515
+ "quote",
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+ "unicode-ident",
517
+ ]
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+
519
+ [[package]]
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+ name = "target-lexicon"
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+ version = "0.13.4"
522
+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "b1dd07eb858a2067e2f3c7155d54e929265c264e6f37efe3ee7a8d1b5a1dd0ba"
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+
525
+ [[package]]
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+ name = "typenum"
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+ version = "1.19.0"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "562d481066bde0658276a35467c4af00bdc6ee726305698a55b86e61d7ad82bb"
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+
531
+ [[package]]
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+ name = "unicode-ident"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "9312f7c4f6ff9069b165498234ce8be658059c6728633667c526e27dc2cf1df5"
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+
537
+ [[package]]
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+ name = "unindent"
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+ version = "0.2.4"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "7264e107f553ccae879d21fbea1d6724ac785e8c3bfc762137959b5802826ef3"
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+
543
+ [[package]]
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+ name = "wide"
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+ version = "0.7.33"
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+ source = "registry+https://github.com/rust-lang/crates.io-index"
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+ checksum = "0ce5da8ecb62bcd8ec8b7ea19f69a51275e91299be594ea5cc6ef7819e16cd03"
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+ dependencies = [
549
+ "bytemuck",
550
+ "safe_arch",
551
+ ]
fastloess-0.1.0/Cargo.toml ADDED
@@ -0,0 +1,54 @@
1
+ [package]
2
+ name = "fastLoess-py"
3
+ version = "0.1.0"
4
+ edition = "2024"
5
+ rust-version = "1.85.0"
6
+
7
+ # Metadata
8
+ description = "High-level, fast LOESS smoothing built on top of the fastLoess Rust crate."
9
+ authors = ["Amir Valizadeh <thisisamirv@gmail.com>"]
10
+ license = "MIT OR Apache-2.0"
11
+ readme = "README.md"
12
+
13
+ # Links
14
+ repository = "https://github.com/thisisamirv/fastLoess-py"
15
+ homepage = "https://github.com/thisisamirv/fastLoess-py"
16
+
17
+ # Categories
18
+ keywords = ["loess", "smoothing", "statistics", "regression", "bioinformatics"]
19
+ categories = ["science", "algorithms"]
20
+
21
+ include = [
22
+ "src/**/*",
23
+ "docs/**/*.svg",
24
+ "fastloess/**/*",
25
+ "Cargo.toml",
26
+ "README.md",
27
+ "LICENSE-MIT",
28
+ "LICENSE-APACHE",
29
+ "CHANGELOG.md",
30
+ ]
31
+
32
+ # Build
33
+ [dependencies]
34
+ fastLoess = { version = "0.1", features = ["dev", "cpu"] }
35
+ pyo3 = { version = "0.27.2", features = ["extension-module"] }
36
+ numpy = "0.27.1"
37
+
38
+ [lib]
39
+ name = "fastloess"
40
+ crate-type = ["cdylib"]
41
+
42
+ [features]
43
+ default = []
44
+ dev = []
45
+
46
+ [profile.release]
47
+ opt-level = 3
48
+ lto = true
49
+ codegen-units = 1
50
+
51
+ # Document all features
52
+ [package.metadata.docs.rs]
53
+ all-features = true
54
+ rustdoc-args = ["--cfg", "docsrs"]