exprmat 0.1.11__tar.gz → 0.1.12__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (172) hide show
  1. {exprmat-0.1.11 → exprmat-0.1.12}/PKG-INFO +1 -1
  2. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/__init__.py +1 -1
  3. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reader/experiment.py +4 -4
  4. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/PKG-INFO +1 -1
  5. {exprmat-0.1.11 → exprmat-0.1.12}/setup.py +1 -1
  6. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/ansi.py +0 -0
  7. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/clustering/__init__.py +0 -0
  8. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/clustering/leiden.py +0 -0
  9. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/clustering/rogue.py +0 -0
  10. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/clustering/spectral.py +0 -0
  11. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/clustering/utils.py +0 -0
  12. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/cnv/__init__.py +0 -0
  13. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/cnv/cnvscore.py +0 -0
  14. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/cnv/infercnv.py +0 -0
  15. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/configuration.py +0 -0
  16. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/__init__.py +0 -0
  17. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/delim.py +0 -0
  18. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/finders.py +0 -0
  19. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/geneset.py +0 -0
  20. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/gff.py +0 -0
  21. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/entrez.tsv.gz +0 -0
  22. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/all.gmt +0 -0
  23. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/bp.gmt +0 -0
  24. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/cancer-modules.gmt +0 -0
  25. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/cancer-neighborhoods.gmt +0 -0
  26. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/cancer.gmt +0 -0
  27. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/cc.gmt +0 -0
  28. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/chemical-perturb.gmt +0 -0
  29. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/hallmark.gmt +0 -0
  30. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/human-phenotype-ontology.gmt +0 -0
  31. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/immune-perturb.gmt +0 -0
  32. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/kegg.gmt +0 -0
  33. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/mf.gmt +0 -0
  34. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/microrna.gmt +0 -0
  35. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/oncogenic.gmt +0 -0
  36. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/pathways.gmt +0 -0
  37. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/positional.gmt +0 -0
  38. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/single-cell.gmt +0 -0
  39. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/transcript-factors.gmt +0 -0
  40. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genesets/vaccine.gmt +0 -0
  41. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/genome.tsv.gz +0 -0
  42. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/baccin2019 +0 -0
  43. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/cellcall +0 -0
  44. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/cellchatdb +0 -0
  45. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/cellinker +0 -0
  46. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/cellphonedb +0 -0
  47. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/celltalkdb +0 -0
  48. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/connectomedb2020 +0 -0
  49. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/consensus +0 -0
  50. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/embrace +0 -0
  51. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/guide2pharma +0 -0
  52. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/hpmr +0 -0
  53. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/icellnet +0 -0
  54. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/italk +0 -0
  55. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/kirouac2010 +0 -0
  56. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/lrdb +0 -0
  57. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/lr/ramilowski2015 +0 -0
  58. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/mapping-ensembl.pkl +0 -0
  59. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/mapping-name.pkl +0 -0
  60. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/aca.gz +0 -0
  61. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/bta.tsv.gz +0 -0
  62. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/cel.tsv.gz +0 -0
  63. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/clu.tsv.gz +0 -0
  64. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/dme.tsv.gz +0 -0
  65. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/dre.tsv.gz +0 -0
  66. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/eca.tsv.gz +0 -0
  67. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/fca.tsv.gz +0 -0
  68. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/gga.tsv.gz +0 -0
  69. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/mdo.tsv.gz +0 -0
  70. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/mmu.tsv.gz +0 -0
  71. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/mmul.gz +0 -0
  72. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/oan.tsv.gz +0 -0
  73. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/ptr.tsv.gz +0 -0
  74. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/rno.tsv.gz +0 -0
  75. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/sce.tsv.gz +0 -0
  76. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/spo.tsv.gz +0 -0
  77. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/ssc.tsv.gz +0 -0
  78. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/orthologs/xla.tsv.gz +0 -0
  79. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/taxa +0 -0
  80. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/lr.py +0 -0
  81. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/entrez.tsv.gz +0 -0
  82. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/all.gmt +0 -0
  83. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/azimuth.gmt +0 -0
  84. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/biocarta.gmt +0 -0
  85. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/bp.gmt +0 -0
  86. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/cc.gmt +0 -0
  87. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/chemical-perturb.gmt +0 -0
  88. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/hallmark.gmt +0 -0
  89. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/kegg.gmt +0 -0
  90. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/m2.gmt +0 -0
  91. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/markers.gmt +0 -0
  92. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/mf.gmt +0 -0
  93. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/microrna.gmt +0 -0
  94. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/mpt.gmt +0 -0
  95. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/positional.gmt +0 -0
  96. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/reactome.gmt +0 -0
  97. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/transcript-factors.gmt +0 -0
  98. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genesets/wikipathway.gmt +0 -0
  99. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/genome.tsv.gz +0 -0
  100. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/lr/consensus +0 -0
  101. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/mapping-ensembl.pkl +0 -0
  102. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/mapping-name.pkl +0 -0
  103. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/taxa +0 -0
  104. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/private.py +0 -0
  105. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/ranges.py +0 -0
  106. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/descriptive/__init__.py +0 -0
  107. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/descriptive/aggregate.py +0 -0
  108. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/descriptive/de.py +0 -0
  109. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/descriptive/gse.py +0 -0
  110. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/descriptive/kde.py +0 -0
  111. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/descriptive/summary.py +0 -0
  112. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/__init__.py +0 -0
  113. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/aggregate.py +0 -0
  114. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/method.py +0 -0
  115. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/__init__.py +0 -0
  116. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/cellchat.py +0 -0
  117. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/cellphonedb.py +0 -0
  118. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/connectome.py +0 -0
  119. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/geomean.py +0 -0
  120. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/logfc.py +0 -0
  121. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/natmi.py +0 -0
  122. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/rank_aggregate.py +0 -0
  123. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/scseqcomm.py +0 -0
  124. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/methods/singlecellsignalr.py +0 -0
  125. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/pipeline.py +0 -0
  126. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/preprocess.py +0 -0
  127. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/resources.py +0 -0
  128. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/utils.py +0 -0
  129. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/__init__.py +0 -0
  130. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/cnv.py +0 -0
  131. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/de.py +0 -0
  132. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/expression.py +0 -0
  133. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/gse.py +0 -0
  134. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/lr.py +0 -0
  135. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/palettes.py +0 -0
  136. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/plotting/summary.py +0 -0
  137. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/__init__.py +0 -0
  138. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/doublets/__init__.py +0 -0
  139. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/doublets/composite.py +0 -0
  140. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/doublets/scrublet.py +0 -0
  141. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/filter.py +0 -0
  142. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/integrate.py +0 -0
  143. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/linear.py +0 -0
  144. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/normal.py +0 -0
  145. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/plot.py +0 -0
  146. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/qc.py +0 -0
  147. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/sctransform/__init__.py +0 -0
  148. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/sctransform/estimate.py +0 -0
  149. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/sctransform/ksmooth.py +0 -0
  150. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/sctransform/residual.py +0 -0
  151. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/sctransform/transform.py +0 -0
  152. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/sparse.py +0 -0
  153. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/preprocessing/uniform.py +0 -0
  154. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reader/__init__.py +0 -0
  155. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reader/matcher.py +0 -0
  156. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reader/metadata.py +0 -0
  157. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/__init__.py +0 -0
  158. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/forceatlas.py +0 -0
  159. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/mde.py +0 -0
  160. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/nn.py +0 -0
  161. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/pca.py +0 -0
  162. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/plot.py +0 -0
  163. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/pumap.py +0 -0
  164. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/tsne.py +0 -0
  165. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reduction/umap.py +0 -0
  166. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat/utils.py +0 -0
  167. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/SOURCES.txt +0 -0
  168. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/dependency_links.txt +0 -0
  169. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/not-zip-safe +0 -0
  170. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/requires.txt +0 -0
  171. {exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/top_level.txt +0 -0
  172. {exprmat-0.1.11 → exprmat-0.1.12}/setup.cfg +0 -0
{exprmat-0.1.11 → exprmat-0.1.12}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
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  Metadata-Version: 2.4
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  Name: exprmat
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- Version: 0.1.11
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+ Version: 0.1.12
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4
  Summary: routines to process expression matrices
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5
  Home-page: https://github.com/yang-z-03/exprmat
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6
  Author: Zheng Yang
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/__init__.py RENAMED
@@ -4,4 +4,4 @@ import anndata as ad
4
4
 
5
5
  mu.set_options(pull_on_update = False)
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7
- def version(): print('exprmat 0.1.11 [revision 1] [dev]')
7
+ def version(): print('exprmat 0.1.12 [revision 1] [dev]')
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/reader/experiment.py RENAMED
@@ -1411,27 +1411,27 @@ class experiment:
1411
1411
 
1412
1412
  @staticmethod
1413
1413
  def rna_plot_gsea_dotplot(
1414
- adata, sample_name, gsea_key, max_fdr = 1, max_p = 0.05,
1414
+ adata, sample_name, gsea_key, max_fdr = 1, max_p = 0.05, top_term: int = 100,
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1415
  colour = 'p', title = "", cmap = 'turbo', figsize = (3, 2), cutoff = 1, ptsize = 5
1416
1416
  ):
1417
1417
  from exprmat.plotting.gse import gsea_dotplot
1418
1418
  return gsea_dotplot(
1419
1419
  experiment.rna_get_gsea(adata, gsea_key, max_fdr = max_fdr, max_p = max_p),
1420
1420
  column = colour, x = 'nes', y = 'name', title = gsea_key if title is None else title,
1421
- cmap = cmap, size = ptsize, figsize = figsize, cutoff = cutoff
1421
+ cmap = cmap, size = ptsize, figsize = figsize, cutoff = cutoff, top_term = top_term
1422
1422
  )
1423
1423
 
1424
1424
 
1425
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  @staticmethod
1426
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  def rna_plot_opa_dotplot(
1427
- adata, sample_name, opa_key, max_fdr = 1, max_p = 0.05,
1427
+ adata, sample_name, opa_key, max_fdr = 1, max_p = 0.05, top_term: int = 100,
1428
1428
  colour = 'fdr', title = None, cmap = 'turbo', figsize = (3, 2), cutoff = 1, ptsize = 5
1429
1429
  ):
1430
1430
  from exprmat.plotting.gse import opa_dotplot
1431
1431
  return opa_dotplot(
1432
1432
  experiment.rna_get_opa(adata, opa_key, max_fdr = max_fdr, max_p = max_p),
1433
1433
  column = colour, x = 'or', y = 'term', title = opa_key if title is None else title,
1434
- cmap = cmap, size = ptsize, figsize = figsize, cutoff = cutoff
1434
+ cmap = cmap, size = ptsize, figsize = figsize, cutoff = cutoff, top_term = top_term
1435
1435
  )
1436
1436
 
1437
1437
 
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: exprmat
3
- Version: 0.1.11
3
+ Version: 0.1.12
4
4
  Summary: routines to process expression matrices
5
5
  Home-page: https://github.com/yang-z-03/exprmat
6
6
  Author: Zheng Yang
{exprmat-0.1.11 → exprmat-0.1.12}/setup.py RENAMED
@@ -3,7 +3,7 @@ from setuptools import setup, find_packages
3
3
 
4
4
  setup(
5
5
  name = 'exprmat',
6
- version = '0.1.11',
6
+ version = '0.1.12',
7
7
  description = 'routines to process expression matrices',
8
8
  url = 'https://github.com/yang-z-03/exprmat',
9
9
  author = 'Zheng Yang',
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/ansi.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/delim.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/gff.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/hsa/taxa RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/lr.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/data/mmu/taxa RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/method.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/lr/utils.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/exprmat/utils.py RENAMED
File without changes
{exprmat-0.1.11 → exprmat-0.1.12}/setup.cfg RENAMED
File without changes