eunoia 0.1.0__tar.gz

eunoia-0.1.0/.envrc

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+#!/usr/bin/env bash
+
+export DIRENV_WARN_TIMEOUT=20s
+
+eval "$(devenv direnvrc)"
+
+# `use devenv` supports the same options as the `devenv shell` command.
+#
+# To silence all output, use `--quiet`.
+#
+# Example usage: use devenv --quiet --impure --option services.postgres.enable:bool true
+use devenv

eunoia-0.1.0/.github/FUNDING.yml

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+github: jolars

eunoia-0.1.0/.github/dependabot.yml

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+version: 2
+updates:
+  - package-ecosystem: github-actions
+    directory: "/"
+    schedule:
+      interval: weekly
+    groups:
+      actions:
+        patterns: ["*"]
+
+  - package-ecosystem: cargo
+    directory: "/"
+    schedule:
+      interval: weekly
+    groups:
+      cargo:
+        patterns: ["*"]
+        exclude-patterns: ["eunoia"]
+
+  - package-ecosystem: uv
+    directory: "/"
+    schedule:
+      interval: weekly
+    groups:
+      python:
+        patterns: ["*"]

eunoia-0.1.0/.github/workflows/ci.yml

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+name: CI
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+
+permissions:
+  contents: read
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  lint:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+
+      - uses: astral-sh/setup-uv@v7
+        with:
+          python-version: "3.12"
+
+      - uses: dtolnay/rust-toolchain@stable
+
+      - uses: Swatinem/rust-cache@v2
+
+      - run: uv sync --all-extras --all-groups
+
+      - run: uv run maturin develop --uv
+
+      - name: Ruff check
+        run: |
+          uvx ruff check
+          uvx ruff format --check --diff
+
+      - name: mypy
+        run: uv run mypy
+
+      - name: pyright
+        run: uv run pyright
+
+  test:
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest, macos-latest, windows-latest]
+        python: ["3.11", "3.13"]
+    runs-on: ${{ matrix.os }}
+    steps:
+      - uses: actions/checkout@v6
+      - uses: astral-sh/setup-uv@v7
+        with:
+          python-version: ${{ matrix.python }}
+      - uses: dtolnay/rust-toolchain@stable
+      - uses: Swatinem/rust-cache@v2
+      - run: uv sync --all-extras --all-groups
+      - run: uv run maturin develop --uv
+      - run: uv run pytest
+
+  docs:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+      - uses: astral-sh/setup-uv@v7
+        with:
+          python-version: "3.12"
+      - uses: dtolnay/rust-toolchain@stable
+      - uses: Swatinem/rust-cache@v2
+      - run: uv sync --all-extras --all-groups
+      - run: uv run maturin develop --uv
+      - run: uv run sphinx-build -b html docs docs/_build/html
+
+  versionary:
+    if: github.event_name == 'push' && github.ref == 'refs/heads/main'
+    needs: test
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+      pull-requests: write
+      issues: write
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+          token: ${{ secrets.RELEASE_TOKEN }}
+
+      - uses: dtolnay/rust-toolchain@stable
+
+      - uses: astral-sh/setup-uv@v7
+        with:
+          python-version: "3.12"
+
+      - id: versionary
+        uses: jolars/versionary@v0
+        with:
+          github-token: ${{ secrets.RELEASE_TOKEN }}

eunoia-0.1.0/.github/workflows/docs.yml

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+name: Docs
+
+on:
+  push:
+    tags:
+      - "v*"
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+concurrency:
+  group: pages
+  cancel-in-progress: false
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+      - uses: astral-sh/setup-uv@v7
+        with:
+          python-version: "3.12"
+      - uses: dtolnay/rust-toolchain@stable
+      - uses: Swatinem/rust-cache@v2
+      - run: uv sync --all-extras --all-groups
+      - run: uv run maturin develop --uv
+      - run: uv run sphinx-build -b html docs docs/_build/html
+      - uses: actions/upload-pages-artifact@v5
+        with:
+          path: docs/_build/html
+
+  deploy:
+    needs: build
+    runs-on: ubuntu-latest
+    permissions:
+      pages: write
+      id-token: write
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    steps:
+      - id: deployment
+        uses: actions/deploy-pages@v5

eunoia-0.1.0/.github/workflows/publish-test.yml

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+name: Publish on TestPyPI
+
+# Manual-only workflow for uploading to test.pypi.org. Mirrors the build
+# matrix in `publish.yml` so the wheels published to TestPyPI are exactly
+# what would ship to prod, then uploads to TestPyPI via Trusted Publishing
+# (separate registration on test.pypi.org from the prod one).
+#
+# `skip-existing: true` so re-running for the same version is idempotent;
+# TestPyPI will refuse to overwrite an existing file otherwise.
+
+on:
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+jobs:
+  linux:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        platform:
+          - target: x86_64-unknown-linux-gnu
+            manylinux: "2_28"
+          - target: aarch64-unknown-linux-gnu
+            manylinux: "2_28"
+          - target: x86_64-unknown-linux-musl
+            manylinux: musllinux_1_2
+          - target: aarch64-unknown-linux-musl
+            manylinux: musllinux_1_2
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          target: ${{ matrix.platform.target }}
+          manylinux: ${{ matrix.platform.manylinux }}
+          args: --release --out dist --strip
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-${{ matrix.platform.target }}
+          path: dist
+
+  macos:
+    runs-on: macos-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        target: [x86_64-apple-darwin, aarch64-apple-darwin]
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          target: ${{ matrix.target }}
+          args: --release --out dist --strip
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-${{ matrix.target }}
+          path: dist
+
+  windows:
+    runs-on: windows-latest
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          target: x86_64-pc-windows-msvc
+          args: --release --out dist --strip
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-windows-x86_64
+          path: dist
+
+  sdist:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          command: sdist
+          args: --out dist
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-sdist
+          path: dist
+
+  smoke-test:
+    needs: [linux]
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/download-artifact@v8
+        with:
+          pattern: wheels-x86_64-unknown-linux-gnu
+          path: dist
+          merge-multiple: true
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+      - name: Install built wheel
+        run: pip install dist/eunoia-*.whl
+      - name: Smoke test
+        run: |
+          python -c "
+          import matplotlib
+          matplotlib.use('Agg')
+          import eunoia as eu
+          fit = eu.euler({'A': 10, 'B': 5, 'A&B': 3})
+          assert fit.diag_error < 0.01, f'diag_error too high: {fit.diag_error}'
+          fit.plot()
+          print('eunoia', eu.__version__, 'wheel smoke test OK')
+          "
+
+  publish-testpypi:
+    name: Publish to TestPyPI
+    needs: [linux, macos, windows, sdist, smoke-test]
+    runs-on: ubuntu-latest
+    environment:
+      name: testpypi
+      url: https://test.pypi.org/p/eunoia
+    permissions:
+      id-token: write # required for trusted publishing
+    steps:
+      - uses: actions/download-artifact@v8
+        with:
+          path: dist
+          merge-multiple: true
+      - uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          repository-url: https://test.pypi.org/legacy/
+          skip-existing: true

eunoia-0.1.0/.github/workflows/publish.yml

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+name: Publish on PyPi
+
+on:
+  push:
+    tags:
+      - "v*"
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+jobs:
+  linux:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        platform:
+          - target: x86_64-unknown-linux-gnu
+            manylinux: "2_28"
+          - target: aarch64-unknown-linux-gnu
+            manylinux: "2_28"
+          - target: x86_64-unknown-linux-musl
+            manylinux: musllinux_1_2
+          - target: aarch64-unknown-linux-musl
+            manylinux: musllinux_1_2
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          target: ${{ matrix.platform.target }}
+          manylinux: ${{ matrix.platform.manylinux }}
+          args: --release --out dist --strip
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-${{ matrix.platform.target }}
+          path: dist
+
+  macos:
+    runs-on: macos-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        target: [x86_64-apple-darwin, aarch64-apple-darwin]
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          target: ${{ matrix.target }}
+          args: --release --out dist --strip
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-${{ matrix.target }}
+          path: dist
+
+  windows:
+    runs-on: windows-latest
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          target: x86_64-pc-windows-msvc
+          args: --release --out dist --strip
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-windows-x86_64
+          path: dist
+
+  sdist:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+      - uses: PyO3/maturin-action@v1
+        with:
+          command: sdist
+          args: --out dist
+      - uses: actions/upload-artifact@v7
+        with:
+          name: wheels-sdist
+          path: dist
+
+  smoke-test:
+    needs: [linux]
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/download-artifact@v8
+        with:
+          pattern: wheels-x86_64-unknown-linux-gnu
+          path: dist
+          merge-multiple: true
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+      - name: Install built wheel
+        run: pip install dist/eunoia-*.whl
+      - name: Smoke test
+        run: |
+          python -c "
+          import matplotlib
+          matplotlib.use('Agg')
+          import eunoia as eu
+          fit = eu.euler({'A': 10, 'B': 5, 'A&B': 3})
+          assert fit.diag_error < 0.01, f'diag_error too high: {fit.diag_error}'
+          fit.plot()
+          print('eunoia', eu.__version__, 'wheel smoke test OK')
+          "
+
+  publish:
+    name: Publish to PyPI
+    needs: [linux, macos, windows, sdist, smoke-test]
+    runs-on: ubuntu-latest
+    if: startsWith(github.ref, 'refs/tags/v')
+    environment:
+      name: pypi
+      url: https://pypi.org/p/eunoia
+    permissions:
+      id-token: write # required for trusted publishing
+    steps:
+      - uses: actions/download-artifact@v8
+        with:
+          path: dist
+          merge-multiple: true
+      - uses: pypa/gh-action-pypi-publish@release/v1

eunoia-0.1.0/.gitignore

@@ -0,0 +1,196 @@
+# Devenv
+.devenv*
+devenv.local.nix
+devenv.local.yaml
+
+# direnv
+.direnv
+
+# pre-commit
+.pre-commit-config.yaml
+
+# python -----------------------------------------------
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# rust -----------------------------------------------
+
+# Generated by Cargo
+# will have compiled files and executables
+debug
+target
+
+# These are backup files generated by rustfmt
+**/*.rs.bk
+
+# MSVC Windows builds of rustc generate these, which store debugging information
+*.pdb
+
+# Generated by cargo mutants Contains mutation testing data
+**/mutants.out*/
+
+# RustRover
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/

eunoia-0.1.0/.versionary-manifest.json

@@ -0,0 +1,11 @@
+{
+  "manifest-version": 1,
+  "baseline-sha": "d003d79019139c6bb4f6f1f743ef68ba8d744fc1",
+  "release-targets": [
+    {
+      "path": ".",
+      "version": "0.1.0",
+      "tag": "v0.1.0"
+    }
+  ]
+}