ethraid 2.5.1__tar.gz → 2.5.2__tar.gz

{ethraid-2.5.1/ethraid.egg-info → ethraid-2.5.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: ethraid
-Version: 2.5.1
+Version: 2.5.2
 Summary: Characterize long-period companions using RV trends, astrometric accelerations, and direct imaging
 Home-page: 
 Author: Judah Van Zandt

{ethraid-2.5.1 → ethraid-2.5.2}/ethraid/__init__.py

@@ -1,7 +1,7 @@
 import os
 from astropy.time import Time
 
-__version__='2.5.1' # Remember to remove random seed
+__version__='2.5.2' # Remember to remove random seed
 
 _ROOT = os.path.abspath(os.path.dirname(__file__))
 

{ethraid-2.5.1 → ethraid-2.5.2}/ethraid/compiled/ethraid/helper_functions_general.c

@@ -3928,7 +3928,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
  *     m_list = spst.loguniform.rvs(m_min, m_max, size=num_points)
  * 
  *     a_prior = spst.loguniform.pdf(a_list, a_min, a_max) # Find the PDF value of each value in a_list             # <<<<<<<<<<<<<<
- *     m_prior = spst.loguniform.pdf(m_list, m_min, m_max)
+ *     m_prior = spst.loguniform.pdf(m_list, m_min, m_max) # Find the PDF value of each value in m_list
  * 
  */
   __Pyx_GetModuleGlobalName(__pyx_t_5, __pyx_n_s_spst); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 76, __pyx_L1_error)
@@ -4001,7 +4001,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
   /* "ethraid/helper_functions_general.pyx":77
  * 
  *     a_prior = spst.loguniform.pdf(a_list, a_min, a_max) # Find the PDF value of each value in a_list
- *     m_prior = spst.loguniform.pdf(m_list, m_min, m_max)             # <<<<<<<<<<<<<<
+ *     m_prior = spst.loguniform.pdf(m_list, m_min, m_max) # Find the PDF value of each value in m_list             # <<<<<<<<<<<<<<
  * 
  *     # Match up a_list and m_list and get the period for each pair (in days).
  */
@@ -4905,7 +4905,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
  *     a_inds = np.digitize(a_list, bins = a_bins)
  *     m_inds = np.digitize(m_list, bins = m_bins)             # <<<<<<<<<<<<<<
  * 
- *     tot_prior = a_prior*m_prior*e_prior*i_prior
+ *     tot_prior = a_prior*m_prior*e_prior*i_prior # Multiply priors to obtain total prior (note: not log)
  */
   __Pyx_GetModuleGlobalName(__pyx_t_12, __pyx_n_s_np); if (unlikely(!__pyx_t_12)) __PYX_ERR(0, 102, __pyx_L1_error)
   __Pyx_GOTREF(__pyx_t_12);
@@ -4934,7 +4934,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
   /* "ethraid/helper_functions_general.pyx":104
  *     m_inds = np.digitize(m_list, bins = m_bins)
  * 
- *     tot_prior = a_prior*m_prior*e_prior*i_prior             # <<<<<<<<<<<<<<
+ *     tot_prior = a_prior*m_prior*e_prior*i_prior # Multiply priors to obtain total prior (note: not log)             # <<<<<<<<<<<<<<
  * 
  *     return a_list, m_list, per_list, e_list, i_list,\
  */
@@ -4950,7 +4950,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
   __pyx_t_14 = 0;
 
   /* "ethraid/helper_functions_general.pyx":106
- *     tot_prior = a_prior*m_prior*e_prior*i_prior
+ *     tot_prior = a_prior*m_prior*e_prior*i_prior # Multiply priors to obtain total prior (note: not log)
  * 
  *     return a_list, m_list, per_list, e_list, i_list,\             # <<<<<<<<<<<<<<
  *            om_list, M_anom_0_list, a_inds, m_inds, tot_prior
@@ -4971,7 +4971,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
   __Pyx_GOTREF(__pyx_t_11);
 
   /* "ethraid/helper_functions_general.pyx":106
- *     tot_prior = a_prior*m_prior*e_prior*i_prior
+ *     tot_prior = a_prior*m_prior*e_prior*i_prior # Multiply priors to obtain total prior (note: not log)
  * 
  *     return a_list, m_list, per_list, e_list, i_list,\             # <<<<<<<<<<<<<<
  *            om_list, M_anom_0_list, a_inds, m_inds, tot_prior
@@ -5094,7 +5094,7 @@ static PyObject *__pyx_pf_7ethraid_8compiled_24helper_functions_general_make_arr
 
 /* Python wrapper */
 static PyObject *__pyx_pw_7ethraid_8compiled_24helper_functions_general_3tot_list(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
-static char __pyx_doc_7ethraid_8compiled_24helper_functions_general_2tot_list[] = "\n    Start with 3 1D lists and add them element-wise.\n    \n    Arguments:\n        rv_post_list, astro_post_list, \n        imag_post_list (1D numpy arrays, len=num_points):\n            Lists of log-likelihoods of the rv/astrometry/imaging data\n            conditioned on a given model. Then ith log-likelihood in each\n            list corresponds to the same model.\n        num_points (int): Length of above lists. Also equal to the\n                          total number of models run.\n    \n    Returns:\n        tot_list (1D numpy array, len=num_points):\n            The likelihoods of all data sets, conditioned on a given\n            model. The ith element is the exponentiation of the sum \n            of the ith elements of the three above lists.\n    ";
+static char __pyx_doc_7ethraid_8compiled_24helper_functions_general_2tot_list[] = "\n    Start with 3 1D lists and add them element-wise.\n    \n    Arguments:\n        rv_post_list, astro_post_list, \n        imag_post_list (1D numpy arrays, len=num_points):\n            Lists of log-likelihoods of the rv/astrometry/imaging data\n            conditioned on a given model. Then ith log-likelihood in each\n            list corresponds to the same model.\n        num_points (int): Length of above lists. Also equal to the\n                          total number of models run.\n    \n    Returns:\n        tot_list (1D numpy array, len=num_points):\n            The log-likelihoods of all data sets, conditioned on a given\n            model. The ith element is the sum of the ith elements of the \n            three above lists.\n    ";
 static PyMethodDef __pyx_mdef_7ethraid_8compiled_24helper_functions_general_3tot_list = {"tot_list", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_7ethraid_8compiled_24helper_functions_general_3tot_list, METH_VARARGS|METH_KEYWORDS, __pyx_doc_7ethraid_8compiled_24helper_functions_general_2tot_list};
 static PyObject *__pyx_pw_7ethraid_8compiled_24helper_functions_general_3tot_list(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
   __Pyx_memviewslice __pyx_v_rv_post_list = { 0, 0, { 0 }, { 0 }, { 0 } };