essdiffraction 24.11.0__tar.gz → 25.2.1__tar.gz

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.copier-answers.yml

@@ -1,13 +1,13 @@
 # Changes here will be overwritten by Copier; NEVER EDIT MANUALLY
-_commit: 75b9a8f
+_commit: 5c4fd02
 _src_path: gh:scipp/copier_template
 description: Diffraction data reduction for the European Spallation Source
-max_python: '3.12'
+max_python: '3.13'
 min_python: '3.10'
 namespace_package: ess
-nightly_deps: scipp,scippnexus,sciline,plopp,scippneutron,essreduce
+nightly_deps: scipp,scippnexus,sciline,plopp,scippneutron,essreduce,tof
 orgname: scipp
 prettyname: ESSdiffraction
 projectname: essdiffraction
 related_projects: Scipp,ScippNexus,ScippNeutron,Sciline,Plopp,ESSreduce
-year: 2024
+year: 2025

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/ci.yml

@@ -10,7 +10,7 @@ on:
 jobs:
   formatting:
     name: Formatting and static analysis
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     outputs:
       min_python: ${{ steps.vars.outputs.min_python }}
       min_tox_env: ${{ steps.vars.outputs.min_tox_env }}
@@ -19,15 +19,15 @@ jobs:
       - name: Get Python version for other CI jobs
         id: vars
         run: |
-          echo "min_python=$(cat .github/workflows/python-version-ci)" >> $GITHUB_OUTPUT
-          echo "min_tox_env=py$(cat .github/workflows/python-version-ci | sed 's/\.//g')" >> $GITHUB_OUTPUT
+          echo "min_python=$(< .github/workflows/python-version-ci)" >> "$GITHUB_OUTPUT"
+          echo "min_tox_env=py$(sed 's/\.//g' < .github/workflows/python-version-ci)" >> "$GITHUB_OUTPUT"
       - uses: actions/setup-python@v5
         with:
           python-version-file: '.github/workflows/python-version-ci'
       - uses: pre-commit/action@v3.0.1
         with:
           extra_args: --all-files
-      - uses: pre-commit-ci/lite-action@v1.0.3
+      - uses: pre-commit-ci/lite-action@v1.1.0
         if: always()
         with:
           msg: Apply automatic formatting
@@ -37,7 +37,7 @@ jobs:
     needs: formatting
     strategy:
       matrix:
-        os: ['ubuntu-22.04']
+        os: ['ubuntu-24.04']
         python:
           - version: '${{needs.formatting.outputs.min_python}}'
             tox-env: '${{needs.formatting.outputs.min_tox_env}}'
@@ -53,6 +53,6 @@ jobs:
     uses: ./.github/workflows/docs.yml
     with:
       publish: false
-      linkcheck: ${{ contains(matrix.variant.os, 'ubuntu') && github.ref == 'refs/heads/main' }}
+      linkcheck: ${{ github.ref == 'refs/heads/main' }}
       branch: ${{ github.head_ref == '' && github.ref_name || github.head_ref }}
     secrets: inherit

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/docs.yml

@@ -41,7 +41,7 @@ env:
 jobs:
   docs:
     name: Build documentation
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     env:
         ESS_PROTECTED_FILESTORE_USERNAME: ${{ secrets.ESS_PROTECTED_FILESTORE_USERNAME }}
         ESS_PROTECTED_FILESTORE_PASSWORD: ${{ secrets.ESS_PROTECTED_FILESTORE_PASSWORD }}
@@ -58,7 +58,7 @@ jobs:
           python-version-file: '.github/workflows/python-version-ci'
       - run: python -m pip install --upgrade pip
       - run: python -m pip install -r requirements/ci.txt
-      - run: tox -e releasedocs -- ${VERSION}
+      - run: tox -e releasedocs -- "${VERSION}"
         if: ${{ inputs.version != '' }}
       - run: tox -e docs
         if: ${{ inputs.version == '' }}
@@ -69,7 +69,7 @@ jobs:
           name: docs_html
           path: html/
 
-      - uses: JamesIves/github-pages-deploy-action@v4.6.4
+      - uses: JamesIves/github-pages-deploy-action@v4.7.2
         if: ${{ inputs.publish }}
         with:
           branch: gh-pages

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/nightly_at_main.yml

@@ -8,21 +8,21 @@ on:
 jobs:
   setup:
     name: Setup variables
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     outputs:
       min_python: ${{ steps.vars.outputs.min_python }}
     steps:
       - uses: actions/checkout@v4
       - name: Get Python version for other CI jobs
         id: vars
-        run: echo "min_python=$(cat .github/workflows/python-version-ci)" >> $GITHUB_OUTPUT
+        run: echo "min_python=$(< .github/workflows/python-version-ci)" >> "$GITHUB_OUTPUT"
 
   tests:
     name: Tests
     needs: setup
     strategy:
       matrix:
-        os: ['ubuntu-22.04']
+        os: ['ubuntu-24.04']
         python:
           - version: '${{needs.setup.outputs.min_python}}'
             tox-env: 'nightly'

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/nightly_at_release.yml

@@ -8,7 +8,7 @@ on:
 jobs:
   setup:
     name: Setup variables
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     outputs:
       min_python: ${{ steps.vars.outputs.min_python }}
       release_tag: ${{ steps.release.outputs.release_tag }}
@@ -18,17 +18,17 @@ jobs:
           fetch-depth: 0  # history required so we can determine latest release tag
       - name: Get last release tag from git
         id: release
-        run: echo "release_tag=$(git describe --tags --abbrev=0 --match '[0-9]*.[0-9]*.[0-9]*')" >> $GITHUB_OUTPUT
+        run: echo "release_tag=$(git describe --tags --abbrev=0 --match '[0-9]*.[0-9]*.[0-9]*')" >> "$GITHUB_OUTPUT"
       - name: Get Python version for other CI jobs
         id: vars
-        run: echo "min_python=$(cat .github/workflows/python-version-ci)" >> $GITHUB_OUTPUT
+        run: echo "min_python=$(cat .github/workflows/python-version-ci)" >> "$GITHUB_OUTPUT"
 
   tests:
     name: Tests
     needs: setup
     strategy:
       matrix:
-        os: ['ubuntu-22.04']
+        os: ['ubuntu-24.04']
         python:
           - version: '${{needs.setup.outputs.min_python}}'
             tox-env: 'nightly'

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/release.yml

@@ -12,7 +12,7 @@ defaults:
 jobs:
   build_conda:
     name: Conda build
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
 
     steps:
       - uses: actions/checkout@v4
@@ -35,7 +35,7 @@ jobs:
 
   build_wheels:
     name: Wheels
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
 
     steps:
       - uses: actions/checkout@v4
@@ -61,7 +61,7 @@ jobs:
   upload_pypi:
     name: Deploy PyPI
     needs: [build_wheels, build_conda]
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     environment: release
     permissions:
       id-token: write
@@ -73,7 +73,7 @@ jobs:
   upload_conda:
     name: Deploy Conda
     needs: [build_wheels, build_conda]
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     if: github.event_name == 'release' && github.event.action == 'published'
 
     steps:
@@ -97,7 +97,7 @@ jobs:
   assets:
     name: Upload docs
     needs: docs
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     permissions:
       contents: write  # This is needed so that the action can upload the asset
     steps:

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/test.yml

@@ -4,7 +4,7 @@ on:
   workflow_dispatch:
     inputs:
       os-variant:
-        default: 'ubuntu-22.04'
+        default: 'ubuntu-24.04'
         type: string
       python-version:
         type: string
@@ -23,7 +23,7 @@ on:
   workflow_call:
     inputs:
       os-variant:
-        default: 'ubuntu-22.04'
+        default: 'ubuntu-24.04'
         type: string
       python-version:
         type: string

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.github/workflows/unpinned.yml

@@ -8,7 +8,7 @@ on:
 jobs:
   setup:
     name: Setup variables
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     outputs:
       min_python: ${{ steps.vars.outputs.min_python }}
       release_tag: ${{ steps.release.outputs.release_tag }}
@@ -18,17 +18,17 @@ jobs:
           fetch-depth: 0  # history required so we can determine latest release tag
       - name: Get last release tag from git
         id: release
-        run: echo "release_tag=$(git describe --tags --abbrev=0 --match '[0-9]*.[0-9]*.[0-9]*')" >> $GITHUB_OUTPUT
+        run: echo "release_tag=$(git describe --tags --abbrev=0 --match '[0-9]*.[0-9]*.[0-9]*')" >> "$GITHUB_OUTPUT"
       - name: Get Python version for other CI jobs
         id: vars
-        run: echo "min_python=$(cat .github/workflows/python-version-ci)" >> $GITHUB_OUTPUT
+        run: echo "min_python=$(cat .github/workflows/python-version-ci)" >> "$GITHUB_OUTPUT"
 
   tests:
     name: Tests
     needs: setup
     strategy:
       matrix:
-        os: ['ubuntu-22.04']
+        os: ['ubuntu-24.04']
         python:
           - version: '${{needs.setup.outputs.min_python}}'
             tox-env: 'unpinned'

essdiffraction-25.2.1/.github/workflows/weekly_windows_macos.yml

@@ -0,0 +1,42 @@
+name: Windows and MacOS weekly tests
+
+on:
+  workflow_dispatch:
+  schedule:
+    - cron: '0 2 * * 1'
+
+jobs:
+  pytox:
+    name: Python and Tox env
+    runs-on: 'ubuntu-24.04'
+    outputs:
+      min_python: ${{ steps.vars.outputs.min_python }}
+      min_tox_env: ${{ steps.vars.outputs.min_tox_env }}
+    steps:
+      - uses: actions/checkout@v4
+      - name: Get Python version for other CI jobs
+        id: vars
+        run: |
+          echo "min_python=$(cat .github/workflows/python-version-ci)" >> $GITHUB_OUTPUT
+          echo "min_tox_env=py$(cat .github/workflows/python-version-ci | sed 's/\.//g')" >> $GITHUB_OUTPUT
+  tests:
+    name: Tests
+    needs: pytox
+    strategy:
+      matrix:
+        os: ['macos-latest', 'windows-latest']
+        python:
+          - version: '${{needs.pytox.outputs.min_python}}'
+            tox-env: '${{needs.pytox.outputs.min_tox_env}}'
+    uses: ./.github/workflows/test.yml
+    with:
+      os-variant: ${{ matrix.os }}
+      python-version: ${{ matrix.python.version }}
+      tox-env: ${{ matrix.python.tox-env }}
+
+  docs:
+    needs: tests
+    uses: ./.github/workflows/docs.yml
+    with:
+      publish: false
+      branch: ${{ github.head_ref == '' && github.ref_name || github.head_ref }}

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.gitignore

@@ -4,7 +4,8 @@ dist
 html
 .tox
 *.egg-info
-uv.lock  # we lock dependencies with pip-compile, not uv
+# we lock dependencies with pip-compile, not uv
+uv.lock
 
 *.sw?
 
@@ -42,3 +43,5 @@ docs/generated/
 *.rcif
 *.ort
 *.zip
+*.sqw
+*.nxspe

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/.pre-commit-config.yaml

@@ -1,8 +1,10 @@
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.6.0
+    rev: v5.0.0
     hooks:
       - id: check-added-large-files
+      - id: check-case-conflict
+      - id: check-illegal-windows-names
       - id: check-json
         exclude: asv.conf.json
       - id: check-merge-conflict
@@ -21,7 +23,7 @@ repos:
         args: [ "--drop-empty-cells",
                 "--extra-keys 'metadata.language_info.version cell.metadata.jp-MarkdownHeadingCollapsed cell.metadata.pycharm'" ]
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.6.2
+    rev: v0.8.0
     hooks:
       - id: ruff
         args: [ --fix ]
@@ -44,3 +46,9 @@ repos:
       - id: rst-directive-colons
       - id: rst-inline-touching-normal
       - id: text-unicode-replacement-char
+  - repo: https://github.com/rhysd/actionlint
+    rev: v1.7.3
+    hooks:
+      - id: actionlint
+        # Disable because of false-positive SC2046
+        args: ["-shellcheck="]

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/LICENSE

@@ -1,6 +1,6 @@
 BSD 3-Clause License
 
-Copyright (c) 2024, Scipp contributors (https://github.com/scipp)
+Copyright (c) 2025, Scipp contributors (https://github.com/scipp)
 All rights reserved.
 
 Redistribution and use in source and binary forms, with or without

{essdiffraction-24.11.0/src/essdiffraction.egg-info → essdiffraction-25.2.1}/PKG-INFO

@@ -1,11 +1,11 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.2
 Name: essdiffraction
-Version: 24.11.0
+Version: 25.2.1
 Summary: Diffraction data reduction for the European Spallation Source
 Author: Scipp contributors
 License: BSD 3-Clause License
         
-        Copyright (c) 2024, Scipp contributors (https://github.com/scipp)
+        Copyright (c) 2025, Scipp contributors (https://github.com/scipp)
         All rights reserved.
         
         Redistribution and use in source and binary forms, with or without
@@ -45,21 +45,23 @@ Classifier: Programming Language :: Python :: 3 :: Only
 Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
 Classifier: Topic :: Scientific/Engineering
 Classifier: Typing :: Typed
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE
 Requires-Dist: dask
-Requires-Dist: essreduce>=24.11.3
+Requires-Dist: essreduce>=25.02.4
 Requires-Dist: graphviz
 Requires-Dist: numpy
 Requires-Dist: plopp
 Requires-Dist: pythreejs
 Requires-Dist: sciline>=24.06.0
 Requires-Dist: scipp>=24.09.1
-Requires-Dist: scippneutron>=24.11.0
+Requires-Dist: scippneutron>=25.02.0
 Requires-Dist: scippnexus>=23.12.0
+Requires-Dist: tof>=25.01.2
 Provides-Extra: test
 Requires-Dist: pandas; extra == "test"
 Requires-Dist: pooch; extra == "test"

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/docs/api-reference/index.md

@@ -26,6 +26,7 @@
    filtering
    grouping
    smoothing
+   transform
    types
 ```
 

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/docs/conf.py

@@ -1,5 +1,5 @@
 # SPDX-License-Identifier: BSD-3-Clause
-# Copyright (c) 2024 Scipp contributors (https://github.com/scipp)
+# Copyright (c) 2025 Scipp contributors (https://github.com/scipp)
 
 import doctest
 import os
@@ -14,9 +14,9 @@ sys.path.insert(0, os.path.abspath("."))
 logger = logging.getLogger(__name__)
 
 # General information about the project.
-project = "ESSdiffraction"
-copyright = "2024 Scipp contributors"
-author = "Scipp contributors"
+project = 'ESSdiffraction'
+copyright = '2025 Scipp contributors'
+author = 'Scipp contributors'
 
 html_show_sourcelink = True
 

{essdiffraction-24.11.0 → essdiffraction-25.2.1}/docs/user-guide/dream/dream-data-reduction.ipynb

@@ -20,7 +20,6 @@
    "outputs": [],
    "source": [
     "import scipp as sc\n",
-    "\n",
     "from ess import dream, powder\n",
     "import ess.dream.data  # noqa: F401\n",
     "from ess.powder.types import *"
@@ -52,7 +51,7 @@
    "metadata": {},
    "source": [
     "We then need to set the missing parameters which are specific to each experiment\n",
-    "(the keys are types defined in [essdiffraction.powder.types](../generated/modules/ess.diffraction.powder.types.rst)):"
+    "(the keys are types defined in [essdiffraction.powder.types](../../generated/modules/ess.powder.types.rst)):"
    ]
   },
   {
@@ -71,14 +70,14 @@
     "workflow[UncertaintyBroadcastMode] = UncertaintyBroadcastMode.drop\n",
     "# Edges for binning in d-spacing\n",
     "workflow[DspacingBins] = sc.linspace(\"dspacing\", 0.0, 2.3434, 201, unit=\"angstrom\")\n",
-    "# Mask in time-of-flight to crop to valid range\n",
-    "workflow[TofMask] = lambda x: (x < sc.scalar(0.0, unit=\"ns\")) | (\n",
-    "        x > sc.scalar(86e6, unit=\"ns\")\n",
-    ")\n",
+    "# Empty masks by default\n",
+    "workflow[TofMask] = None\n",
     "workflow[TwoThetaMask] = None\n",
     "workflow[WavelengthMask] = None\n",
     "# No pixel masks\n",
-    "workflow = powder.with_pixel_mask_filenames(workflow, [])"
+    "workflow = powder.with_pixel_mask_filenames(workflow, [])\n",
+    "# Time-of-flight lookup table\n",
+    "workflow[TimeOfFlightLookupTableFilename] = dream.data.tof_lookup_table_high_flux()"
    ]
   },
   {
@@ -86,7 +85,7 @@
    "id": "6",
    "metadata": {},
    "source": [
-    "## Use the workflow\n",
+    "## Use the reduction workflow\n",
     "\n",
     "We can visualize the graph for computing the final normalized result for intensity as a function of time-of-flight:"
    ]
@@ -152,7 +151,7 @@
     "in the documentation of ESSdiffraction.\n",
     "See https://scipp.github.io/essdiffraction/\n",
     "\"\"\"\n",
-    "cif_data.save('reduced.cif')"
+    "cif_data.save(\"reduced.cif\")"
    ]
   },
   {
@@ -192,9 +191,9 @@
    "outputs": [],
    "source": [
     "two_theta = sc.linspace(\"two_theta\", 0.8, 2.4, 301, unit=\"rad\")\n",
-    "intermediates[MaskedData[SampleRun]].hist(two_theta=two_theta, wavelength=300).plot(\n",
-    "    norm=\"log\"\n",
-    ")"
+    "intermediates[MaskedData[SampleRun]].hist(\n",
+    "    two_theta=two_theta, wavelength=300\n",
+    ").plot(norm=\"log\")"
    ]
   },
   {
@@ -216,7 +215,7 @@
    "outputs": [],
    "source": [
     "workflow[TwoThetaBins] = sc.linspace(\n",
-    "    dim=\"two_theta\", unit=\"rad\", start=0.8, stop=2.4, num=17\n",
+    "    dim=\"two_theta\", unit=\"rad\", start=0.8, stop=2.4, num=201\n",
     ")"
    ]
   },
@@ -237,31 +236,13 @@
    "id": "19",
    "metadata": {},
    "outputs": [],
-   "source": [
-    "angle = sc.midpoints(grouped_dspacing.coords[\"two_theta\"])\n",
-    "sc.plot(\n",
-    "    {\n",
-    "        f\"{angle[group].value:.3f} {angle[group].unit}\": grouped_dspacing[\n",
-    "            \"two_theta\", group\n",
-    "        ].hist()\n",
-    "        for group in range(2, 6)\n",
-    "    }\n",
-    ")"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "20",
-   "metadata": {},
-   "outputs": [],
    "source": [
     "grouped_dspacing.hist().plot(norm=\"log\")"
    ]
   },
   {
    "cell_type": "markdown",
-   "id": "21",
+   "id": "20",
    "metadata": {},
    "source": [
     "##  Normalizing by monitor\n",
@@ -283,7 +264,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "22",
+   "id": "21",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -292,7 +273,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "23",
+   "id": "22",
    "metadata": {},
    "source": [
     "In addition to the parameters used before, we also need to provide filenames for monitor data and a position of the monitor as that is not saved in the simulation files:"
@@ -301,14 +282,14 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "24",
+   "id": "23",
    "metadata": {},
    "outputs": [],
    "source": [
     "workflow[MonitorFilename[SampleRun]] = dream.data.simulated_monitor_diamond_sample()\n",
     "workflow[MonitorFilename[VanadiumRun]] = dream.data.simulated_monitor_vanadium_sample()\n",
     "workflow[MonitorFilename[BackgroundRun]] = dream.data.simulated_monitor_empty_can()\n",
-    "workflow[CaveMonitorPosition] = sc.vector([0.0, 0.0, -4220.0], unit='mm')\n",
+    "workflow[CaveMonitorPosition] = sc.vector([0.0, 0.0, -4220.0], unit=\"mm\")\n",
     "\n",
     "# These are the same as at the top of the notebook:\n",
     "workflow[Filename[SampleRun]] = dream.data.simulated_diamond_sample()\n",
@@ -318,18 +299,17 @@
     "workflow[NeXusDetectorName] = \"mantle\"\n",
     "workflow[UncertaintyBroadcastMode] = UncertaintyBroadcastMode.drop\n",
     "workflow[DspacingBins] = sc.linspace(\"dspacing\", 0.0, 2.3434, 201, unit=\"angstrom\")\n",
-    "workflow[TofMask] = lambda x: (x < sc.scalar(0.0, unit=\"ns\")) | (\n",
-    "        x > sc.scalar(86e6, unit=\"ns\")\n",
-    ")\n",
+    "workflow[TofMask] = None\n",
     "workflow[TwoThetaMask] = None\n",
     "workflow[WavelengthMask] = None\n",
-    "workflow = powder.with_pixel_mask_filenames(workflow, [])"
+    "workflow = powder.with_pixel_mask_filenames(workflow, [])\n",
+    "workflow[TimeOfFlightLookupTableFilename] = dream.data.tof_lookup_table_high_flux()"
    ]
   },
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "25",
+   "id": "24",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -339,7 +319,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "26",
+   "id": "25",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -352,7 +332,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "27",
+   "id": "26",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -361,7 +341,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "28",
+   "id": "27",
    "metadata": {},
    "source": [
     "Comparing the final, normalized result shows that it agrees with the data that was normalized by proton-charge:"
@@ -370,14 +350,11 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "29",
+   "id": "28",
    "metadata": {},
    "outputs": [],
    "source": [
-    "sc.plot({\n",
-    "    'By proton charge': histogram,\n",
-    "    'By monitor': normalized_by_monitor.hist()\n",
-    "})"
+    "sc.plot({\"By proton charge\": histogram, \"By monitor\": normalized_by_monitor.hist()})"
    ]
   }
  ],
@@ -396,8 +373,7 @@
    "mimetype": "text/x-python",
    "name": "python",
    "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython3",
-   "version": "3.10.14"
+   "pygments_lexer": "ipython3"
   }
  },
  "nbformat": 4,