eqc-models 0.11.1__tar.gz → 0.12.0__tar.gz

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Files changed (182) hide show
  1. {eqc_models-0.11.1/eqc_models.egg-info → eqc_models-0.12.0}/PKG-INFO +2 -3
  2. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/polyeval.c +4219 -3442
  3. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/quadratic.py +2 -2
  4. eqc_models-0.12.0/eqc_models/graph/__init__.py +9 -0
  5. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/graph/base.py +8 -4
  6. eqc_models-0.12.0/eqc_models/graph/shortestpath.py +157 -0
  7. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/classifierbase.py +31 -5
  8. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/classifierqboost.py +14 -1
  9. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/classifierqsvm.py +28 -0
  10. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/clustering.py +5 -5
  11. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/clusteringbase.py +1 -1
  12. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/process/base.py +6 -1
  13. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/process/mpc.py +1 -1
  14. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/solvers/__init__.py +1 -5
  15. eqc_models-0.12.0/eqc_models/solvers/eqcdirect.py +71 -0
  16. {eqc_models-0.11.1 → eqc_models-0.12.0/eqc_models.egg-info}/PKG-INFO +2 -3
  17. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models.egg-info/SOURCES.txt +54 -1
  18. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models.egg-info/requires.txt +1 -3
  19. {eqc_models-0.11.1 → eqc_models-0.12.0}/pyproject.toml +5 -2
  20. eqc_models-0.12.0/scripts/qboost_iris_dirac3_direct.py +103 -0
  21. eqc_models-0.12.0/scripts/test_shortestpath.py +38 -0
  22. eqc_models-0.12.0/test/testshortestpath.py +55 -0
  23. eqc_models-0.12.0/test_suite/README.txt +22 -0
  24. eqc_models-0.12.0/test_suite/run_tests.py +293 -0
  25. eqc_models-0.12.0/test_suite/test_cases/c6h6_graph_clustering/c6h6_graph_clustering.py +60 -0
  26. eqc_models-0.12.0/test_suite/test_cases/clustering/clustering.py +49 -0
  27. eqc_models-0.12.0/test_suite/test_cases/clustering/data/X.npy +0 -0
  28. eqc_models-0.12.0/test_suite/test_cases/cvqboost_iris/cvqboost_iris.py +63 -0
  29. eqc_models-0.12.0/test_suite/test_cases/cvqboost_iris/data/X_test.npy +0 -0
  30. eqc_models-0.12.0/test_suite/test_cases/cvqboost_iris/data/X_train.npy +0 -0
  31. eqc_models-0.12.0/test_suite/test_cases/cvqboost_iris/data/y_test.npy +0 -0
  32. eqc_models-0.12.0/test_suite/test_cases/cvqboost_iris/data/y_train.npy +0 -0
  33. eqc_models-0.12.0/test_suite/test_cases/karate_graph_clustering/karate_graph_clustering.py +44 -0
  34. eqc_models-0.12.0/test_suite/test_cases/pca_iris/pca_iris.py +59 -0
  35. eqc_models-0.12.0/test_suite/test_cases/protein_design_1MJC/data/C_1MJC.npy +0 -0
  36. eqc_models-0.12.0/test_suite/test_cases/protein_design_1MJC/data/J_1MJC.npy +0 -0
  37. eqc_models-0.12.0/test_suite/test_cases/protein_design_1MJC/protein_design_1MJC.py +52 -0
  38. eqc_models-0.12.0/test_suite/test_cases/protein_design_1NXB/data/C_1NXB.npy +0 -0
  39. eqc_models-0.12.0/test_suite/test_cases/protein_design_1NXB/data/J_1NXB.npy +0 -0
  40. eqc_models-0.12.0/test_suite/test_cases/protein_design_1NXB/protein_design_1NXB.py +52 -0
  41. eqc_models-0.12.0/test_suite/test_cases/protein_design_1POH/data/C_1POH.npy +0 -0
  42. eqc_models-0.12.0/test_suite/test_cases/protein_design_1POH/data/J_1POH.npy +0 -0
  43. eqc_models-0.12.0/test_suite/test_cases/protein_design_1POH/protein_design_1POH.py +52 -0
  44. eqc_models-0.12.0/test_suite/test_cases/qsvm_dual_iris/data/X_test.npy +0 -0
  45. eqc_models-0.12.0/test_suite/test_cases/qsvm_dual_iris/data/X_train.npy +0 -0
  46. eqc_models-0.12.0/test_suite/test_cases/qsvm_dual_iris/data/y_test.npy +0 -0
  47. eqc_models-0.12.0/test_suite/test_cases/qsvm_dual_iris/data/y_train.npy +0 -0
  48. eqc_models-0.12.0/test_suite/test_cases/qsvm_dual_iris/qsvm_dual_iris.py +64 -0
  49. eqc_models-0.12.0/test_suite/test_cases/qsvm_primal_iris/data/X_test.npy +0 -0
  50. eqc_models-0.12.0/test_suite/test_cases/qsvm_primal_iris/data/X_train.npy +0 -0
  51. eqc_models-0.12.0/test_suite/test_cases/qsvm_primal_iris/data/y_test.npy +0 -0
  52. eqc_models-0.12.0/test_suite/test_cases/qsvm_primal_iris/data/y_train.npy +0 -0
  53. eqc_models-0.12.0/test_suite/test_cases/qsvm_primal_iris/qsvm_primal_iris.py +57 -0
  54. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_100/data/C_8000000_100.npy +0 -0
  55. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_100/data/J_8000000_100.npy +0 -0
  56. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_100/synthetic_cls_100.py +52 -0
  57. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_300/data/C_8000000_300.npy +0 -0
  58. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_300/data/J_8000000_300.npy +0 -0
  59. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_300/synthetic_cls_300.py +52 -0
  60. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_500/data/C_8000000_500.npy +0 -0
  61. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_500/data/J_8000000_500.npy +0 -0
  62. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_500/synthetic_cls_500.py +52 -0
  63. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_700/data/C_8000000_700.npy +0 -0
  64. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_700/data/J_8000000_700.npy +0 -0
  65. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_700/synthetic_cls_700.py +52 -0
  66. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_900/data/C_8000000_900.npy +0 -0
  67. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_900/data/J_8000000_900.npy +0 -0
  68. eqc_models-0.12.0/test_suite/test_cases/synthetic_cls_900/synthetic_cls_900.py +52 -0
  69. eqc_models-0.12.0/test_suite/test_suite_config.json +212 -0
  70. eqc_models-0.12.0/test_suite/test_utils.py +34 -0
  71. eqc_models-0.11.1/eqc_models/graph/__init__.py +0 -6
  72. {eqc_models-0.11.1 → eqc_models-0.12.0}/.gitlab-ci.yml +0 -0
  73. {eqc_models-0.11.1 → eqc_models-0.12.0}/LICENSE.txt +0 -0
  74. {eqc_models-0.11.1 → eqc_models-0.12.0}/MANIFEST.in +0 -0
  75. {eqc_models-0.11.1 → eqc_models-0.12.0}/README.md +0 -0
  76. {eqc_models-0.11.1 → eqc_models-0.12.0}/compile_extensions.py +0 -0
  77. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/Makefile +0 -0
  78. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/basic.css +0 -0
  79. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/css/badge_only.css +0 -0
  80. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/css/theme.css +0 -0
  81. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/custom.css +0 -0
  82. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/file.png +0 -0
  83. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/minus.png +0 -0
  84. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/plus.png +0 -0
  85. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/pygments.css +0 -0
  86. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/build/html/_static/white_logo.png +0 -0
  87. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/make.bat +0 -0
  88. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/_static/custom.css +0 -0
  89. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/_static/white_logo.png +0 -0
  90. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/conf.py +0 -0
  91. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/dependencies.rst +0 -0
  92. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/eqc_models.rst +0 -0
  93. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/index.rst +0 -0
  94. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/modules.rst +0 -0
  95. {eqc_models-0.11.1 → eqc_models-0.12.0}/docs/source/usage.rst +0 -0
  96. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/__init__.py +0 -0
  97. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/algorithms/__init__.py +0 -0
  98. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/algorithms/base.py +0 -0
  99. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/algorithms/penaltymultiplier.py +0 -0
  100. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/allocation/__init__.py +0 -0
  101. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/allocation/allocation.py +0 -0
  102. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/allocation/portbase.py +0 -0
  103. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/allocation/portmomentum.py +0 -0
  104. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/assignment/__init__.py +0 -0
  105. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/assignment/qap.py +0 -0
  106. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/assignment/resource.py +0 -0
  107. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/assignment/setpartition.py +0 -0
  108. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/__init__.py +0 -0
  109. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/base.py +0 -0
  110. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/constraints.py +0 -0
  111. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/operators.py +0 -0
  112. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/polyeval.pyx +0 -0
  113. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/polynomial.py +0 -0
  114. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/base/results.py +0 -0
  115. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/combinatorics/__init__.py +0 -0
  116. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/combinatorics/setcover.py +0 -0
  117. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/combinatorics/setpartition.py +0 -0
  118. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/decoding.py +0 -0
  119. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/graph/hypergraph.py +0 -0
  120. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/graph/maxcut.py +0 -0
  121. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/graph/maxkcut.py +0 -0
  122. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/graph/partition.py +0 -0
  123. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/__init__.py +0 -0
  124. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/cvqboost_hamiltonian.pyx +0 -0
  125. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/cvqboost_hamiltonian_c_func.c +0 -0
  126. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/cvqboost_hamiltonian_c_func.h +0 -0
  127. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/decomposition.py +0 -0
  128. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/forecast.py +0 -0
  129. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/forecastbase.py +0 -0
  130. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/regressor.py +0 -0
  131. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/regressorbase.py +0 -0
  132. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/ml/reservoir.py +0 -0
  133. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/sequence/__init__.py +0 -0
  134. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/sequence/tsp.py +0 -0
  135. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/solvers/qciclient.py +0 -0
  136. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/utilities/__init__.py +0 -0
  137. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/utilities/fileio.py +0 -0
  138. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/utilities/polynomial.py +0 -0
  139. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models/utilities/qplib.py +0 -0
  140. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models.egg-info/dependency_links.txt +0 -0
  141. {eqc_models-0.11.1 → eqc_models-0.12.0}/eqc_models.egg-info/top_level.txt +0 -0
  142. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/binary_job_example.py +0 -0
  143. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/c6h6_graph_clustering.py +0 -0
  144. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/clustering.py +0 -0
  145. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/continuous_job_example.py +0 -0
  146. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/crew_assignment_example.py +0 -0
  147. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/graph_clustering.py +0 -0
  148. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/graph_partitioning.py +0 -0
  149. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/hamiltonian_to_polynomial.py +0 -0
  150. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/hypergraph.py +0 -0
  151. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/integer_job_example.py +0 -0
  152. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/karate_graph_clustering.py +0 -0
  153. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/lin_reg_dirac3.py +0 -0
  154. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/mackey_glass_cell_production_series.csv +0 -0
  155. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/pca_iris_dirac3.py +0 -0
  156. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/port_opt_dirac3.py +0 -0
  157. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/qboost_iris_dirac3.py +0 -0
  158. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/qplib_benchmark_config.py +0 -0
  159. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/qplib_reader.py +0 -0
  160. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/qplib_runner.py +0 -0
  161. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/qsvm_dual_iris_dirac3.py +0 -0
  162. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/qsvm_iris_dirac3.py +0 -0
  163. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/reservoir_forecast.py +0 -0
  164. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/results_example.py +0 -0
  165. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/rundoctests.py +0 -0
  166. {eqc_models-0.11.1 → eqc_models-0.12.0}/scripts/utils.py +0 -0
  167. {eqc_models-0.11.1 → eqc_models-0.12.0}/setup.cfg +0 -0
  168. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/doctest_base.py +0 -0
  169. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testallocationmodel.py +0 -0
  170. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testconstraint.py +0 -0
  171. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testcvqboost.py +0 -0
  172. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testeqcdirectsolver.py +0 -0
  173. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testgraphpartitionmodel.py +0 -0
  174. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testhypergraphmodel.py +0 -0
  175. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testmaxcutmodel.py +0 -0
  176. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testpolynomialmodel.py +0 -0
  177. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testqapmodel.py +0 -0
  178. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testqciclientsolver.py +0 -0
  179. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testquadraticmodel.py +0 -0
  180. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testsetcovermodel.py +0 -0
  181. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testsetpartitionmodel.py +0 -0
  182. {eqc_models-0.11.1 → eqc_models-0.12.0}/test/testtsp.py +0 -0
{eqc_models-0.11.1/eqc_models.egg-info → eqc_models-0.12.0}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: eqc-models
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- Version: 0.11.1
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+ Version: 0.12.0
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  Summary: Optimization and ML modeling package targeting EQC devices
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  Author: Quantum Computing Inc.
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  Author-email: support@quantumcomputinginc.com
@@ -16,8 +16,7 @@ Requires-Dist: pandas>=2.1.0
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  Requires-Dist: scikit-learn>=1.2.1
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  Requires-Dist: qci-client<5,>=4.3.0
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  Requires-Dist: emucore-direct==1.0.6
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- Provides-Extra: direct
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- Requires-Dist: eqc-direct<2,>=1.3.0; extra == "direct"
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+ Requires-Dist: eqc-direct<3,>=2.0.1
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  Provides-Extra: dev
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  Requires-Dist: pytest<8,>=7.1.0; extra == "dev"
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  Requires-Dist: pytest-cov; extra == "dev"