empix 0.0.9__tar.gz → 0.0.10__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {empix-0.0.9 → empix-0.0.10}/PKG-INFO +2 -1
- {empix-0.0.9 → empix-0.0.10}/docs/build_docs.py +18 -6
- {empix-0.0.9 → empix-0.0.10}/docs/conf.py +33 -12
- {empix-0.0.9 → empix-0.0.10}/docs/index.rst +5 -0
- {empix-0.0.9 → empix-0.0.10}/empix/version.py +3 -3
- {empix-0.0.9 → empix-0.0.10}/empix.egg-info/PKG-INFO +2 -1
- {empix-0.0.9 → empix-0.0.10}/empix.egg-info/requires.txt +1 -0
- {empix-0.0.9 → empix-0.0.10}/examples/basic_usage.ipynb +4 -4
- {empix-0.0.9 → empix-0.0.10}/examples/helpers_for_basic_usage.py +1 -1
- {empix-0.0.9 → empix-0.0.10}/pyproject.toml +2 -1
- {empix-0.0.9 → empix-0.0.10}/.coveragerc +0 -0
- {empix-0.0.9 → empix-0.0.10}/.github/workflows/measure_code_coverage.yml +0 -0
- {empix-0.0.9 → empix-0.0.10}/.github/workflows/publish_documentation_website.yml +0 -0
- {empix-0.0.9 → empix-0.0.10}/.github/workflows/publish_release_to_pypi.yml +0 -0
- {empix-0.0.9 → empix-0.0.10}/.github/workflows/test_library.yml +0 -0
- {empix-0.0.9 → empix-0.0.10}/.gitignore +0 -0
- {empix-0.0.9 → empix-0.0.10}/LICENSE +0 -0
- {empix-0.0.9 → empix-0.0.10}/README.md +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/INSTALL.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/Makefile +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/_static/readthedocs_custom.css +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/_templates/custom_class_template.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/_templates/custom_module_template.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/_templates/versions.html +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/api.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/examples.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/license.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/make.bat +0 -0
- {empix-0.0.9 → empix-0.0.10}/docs/private_members_to_publish_to_docs.rst +0 -0
- {empix-0.0.9 → empix-0.0.10}/empix/__init__.py +0 -0
- {empix-0.0.9 → empix-0.0.10}/empix.egg-info/SOURCES.txt +0 -0
- {empix-0.0.9 → empix-0.0.10}/empix.egg-info/dependency_links.txt +0 -0
- {empix-0.0.9 → empix-0.0.10}/empix.egg-info/top_level.txt +0 -0
- {empix-0.0.9 → empix-0.0.10}/run_tests.sh +0 -0
- {empix-0.0.9 → empix-0.0.10}/setup.cfg +0 -0
- {empix-0.0.9 → empix-0.0.10}/setup.py +0 -0
- {empix-0.0.9 → empix-0.0.10}/tests/test_root.py +0 -0
- {empix-0.0.9 → empix-0.0.10}/tox.ini +0 -0
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: empix
|
|
3
|
-
Version: 0.0.
|
|
3
|
+
Version: 0.0.10
|
|
4
4
|
Summary: Contains tools for analyzing electron microscopy data that are not available in ``hyperspy``.
|
|
5
5
|
Author-email: Matthew Fitzpatrick <matthew.rc.fitzpatrick@gmail.com>
|
|
6
6
|
Project-URL: Homepage, https://mrfitzpa.github.io/empix
|
|
@@ -26,6 +26,7 @@ Requires-Dist: fancytypes>=1.0.0
|
|
|
26
26
|
Requires-Dist: hyperspy
|
|
27
27
|
Requires-Dist: pyFAI
|
|
28
28
|
Requires-Dist: numba
|
|
29
|
+
Requires-Dist: scikit-image
|
|
29
30
|
Provides-Extra: tests
|
|
30
31
|
Requires-Dist: pytest-cov; extra == "tests"
|
|
31
32
|
Provides-Extra: examples
|
|
@@ -98,16 +98,28 @@ _mvdir("./_build/html/", "./pages/")
|
|
|
98
98
|
|
|
99
99
|
cmd_output_as_bytes = subprocess.check_output("git tag", shell=True)
|
|
100
100
|
cmd_output = cmd_output_as_bytes.decode("utf-8")
|
|
101
|
-
|
|
101
|
+
tag_set = cmd_output.rstrip("\n").split("\n")
|
|
102
102
|
|
|
103
103
|
pattern = r"v[0-9]+\.[0-9]+\.[0-9]+"
|
|
104
|
-
|
|
104
|
+
release_tag_set = tuple(tag for tag in tag_set if re.fullmatch(pattern, tag))
|
|
105
105
|
|
|
106
|
-
|
|
106
|
+
version_subset = dict()
|
|
107
|
+
for tag in release_tag_set:
|
|
107
108
|
version = tag[1:]
|
|
108
|
-
|
|
109
|
-
|
|
110
|
-
|
|
109
|
+
major, minor, patch = [int(int_as_str) for int_as_str in version.split(".")]
|
|
110
|
+
version_subset.setdefault(major, dict())
|
|
111
|
+
version_subset[major].setdefault(minor, 0)
|
|
112
|
+
version_subset[major][minor] = max(version_subset[major][minor], patch)
|
|
113
|
+
|
|
114
|
+
for major in sorted(version_subset.keys()):
|
|
115
|
+
for minor in sorted(version_subset[major].keys()):
|
|
116
|
+
patch = version_subset[major][minor]
|
|
117
|
+
version = "{}.{}.{}".format(major, minor, patch)
|
|
118
|
+
tag = "v"+version
|
|
119
|
+
major_minor = "{}.{}".format(major, minor)
|
|
120
|
+
language = "en"
|
|
121
|
+
_build_doc(version, language, tag)
|
|
122
|
+
_mvdir("./_build/html/", "./pages/"+major_minor+"/"+language+"/")
|
|
111
123
|
|
|
112
124
|
subprocess.run("cd ..; pip install .; cd docs", shell=True)
|
|
113
125
|
_mvdir("./pages/", "../pages/")
|
|
@@ -163,33 +163,54 @@ build_all_docs = os.environ.get("build_all_docs", None)
|
|
|
163
163
|
pages_root = os.environ.get("pages_root", "")
|
|
164
164
|
|
|
165
165
|
if build_all_docs is not None:
|
|
166
|
-
current_language = os.environ.get("current_language")
|
|
166
|
+
current_language = os.environ.get("current_language")
|
|
167
167
|
current_version = os.environ.get("current_version")
|
|
168
168
|
|
|
169
|
+
major, minor, patch = ((None, None, None)
|
|
170
|
+
if (current_version == "latest")
|
|
171
|
+
else current_version.split("."))
|
|
172
|
+
current_major_minor = ("latest"
|
|
173
|
+
if (major is None)
|
|
174
|
+
else "{}.{}".format(major, minor))
|
|
175
|
+
|
|
169
176
|
html_context = {"current_language" : current_language,
|
|
170
177
|
"languages" : [],
|
|
171
|
-
"current_version" :
|
|
178
|
+
"current_version" : current_major_minor,
|
|
172
179
|
"versions" : []}
|
|
173
180
|
|
|
174
|
-
if
|
|
181
|
+
if current_version == "latest":
|
|
175
182
|
html_context["languages"].append(["en", pages_root])
|
|
176
183
|
|
|
177
|
-
if
|
|
184
|
+
if current_language == "en":
|
|
178
185
|
html_context["versions"].append(["latest", pages_root])
|
|
179
186
|
|
|
180
187
|
cmd_output_as_bytes = subprocess.check_output("git tag", shell=True)
|
|
181
188
|
cmd_output = cmd_output_as_bytes.decode("utf-8")
|
|
182
|
-
|
|
189
|
+
tag_set = cmd_output.rstrip("\n").split("\n")
|
|
183
190
|
|
|
184
191
|
pattern = r"v[0-9]+\.[0-9]+\.[0-9]+"
|
|
185
|
-
|
|
192
|
+
release_tag_set = tuple(tag
|
|
193
|
+
for tag
|
|
194
|
+
in tag_set
|
|
195
|
+
if re.fullmatch(pattern, tag))
|
|
186
196
|
|
|
187
|
-
|
|
197
|
+
version_subset = dict()
|
|
198
|
+
for tag in release_tag_set:
|
|
199
|
+
version = tag[1:]
|
|
200
|
+
major, minor, patch = [int(int_as_str)
|
|
201
|
+
for int_as_str
|
|
202
|
+
in version.split(".")]
|
|
203
|
+
version_subset.setdefault(major, dict())
|
|
204
|
+
version_subset[major].setdefault(minor, 0)
|
|
205
|
+
version_subset[major][minor] = max(version_subset[major][minor], patch)
|
|
206
|
+
|
|
207
|
+
if current_version != "latest":
|
|
188
208
|
language = "en"
|
|
189
|
-
path = pages_root+"/"+
|
|
209
|
+
path = pages_root+"/"+current_major_minor+"/"+language
|
|
190
210
|
html_context["languages"].append([language, path])
|
|
191
211
|
|
|
192
|
-
for
|
|
193
|
-
|
|
194
|
-
|
|
195
|
-
|
|
212
|
+
for major in sorted(version_subset.keys()):
|
|
213
|
+
for minor in sorted(version_subset[major].keys()):
|
|
214
|
+
major_minor = "{}.{}".format(major, minor)
|
|
215
|
+
path = pages_root+"/"+major_minor+"/"+current_language
|
|
216
|
+
html_context["versions"].append([major_minor, path])
|
|
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
|
|
|
28
28
|
commit_id: COMMIT_ID
|
|
29
29
|
__commit_id__: COMMIT_ID
|
|
30
30
|
|
|
31
|
-
__version__ = version = '0.0.
|
|
32
|
-
__version_tuple__ = version_tuple = (0, 0,
|
|
31
|
+
__version__ = version = '0.0.10'
|
|
32
|
+
__version_tuple__ = version_tuple = (0, 0, 10)
|
|
33
33
|
|
|
34
|
-
__commit_id__ = commit_id = '
|
|
34
|
+
__commit_id__ = commit_id = 'gdc5580860'
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: empix
|
|
3
|
-
Version: 0.0.
|
|
3
|
+
Version: 0.0.10
|
|
4
4
|
Summary: Contains tools for analyzing electron microscopy data that are not available in ``hyperspy``.
|
|
5
5
|
Author-email: Matthew Fitzpatrick <matthew.rc.fitzpatrick@gmail.com>
|
|
6
6
|
Project-URL: Homepage, https://mrfitzpa.github.io/empix
|
|
@@ -26,6 +26,7 @@ Requires-Dist: fancytypes>=1.0.0
|
|
|
26
26
|
Requires-Dist: hyperspy
|
|
27
27
|
Requires-Dist: pyFAI
|
|
28
28
|
Requires-Dist: numba
|
|
29
|
+
Requires-Dist: scikit-image
|
|
29
30
|
Provides-Extra: tests
|
|
30
31
|
Requires-Dist: pytest-cov; extra == "tests"
|
|
31
32
|
Provides-Extra: examples
|
|
@@ -131,13 +131,13 @@
|
|
|
131
131
|
"\n",
|
|
132
132
|
" conda install -y empix jupyter ipympl -c conda-forge\n",
|
|
133
133
|
"\n",
|
|
134
|
-
"You can find the documentation for the
|
|
134
|
+
"You can find the documentation for the ``empix`` library\n",
|
|
135
135
|
"[here](https://mrfitzpa.github.io/empix/_autosummary/empix.html). It is\n",
|
|
136
136
|
"recommended that you consult the documentation of this library as you explore\n",
|
|
137
137
|
"the notebook. Moreover, users should execute the cells in the order that they\n",
|
|
138
138
|
"appear, i.e. from top to bottom, as some cells reference variables that are set\n",
|
|
139
|
-
"in other cells above them. **Users should make sure to navigate the
|
|
140
|
-
"for the version of
|
|
139
|
+
"in other cells above them. **Users should make sure to navigate the\n",
|
|
140
|
+
"documentation for the version of ``empix`` that they are currently using.**\n",
|
|
141
141
|
"\n",
|
|
142
142
|
"The last module that we imported above (i.e. the module with the alias helpers)\n",
|
|
143
143
|
"contains helper functions that are used throughout the remainder of the\n",
|
|
@@ -145,7 +145,7 @@
|
|
|
145
145
|
"not essential that users know the implementation details of these helper\n",
|
|
146
146
|
"functions in order to follow the logic of each cell in the remainder of this\n",
|
|
147
147
|
"notebook. Moreover, users need not import this module for their own applications\n",
|
|
148
|
-
"of
|
|
148
|
+
"of ``empix``. That being said, if any users are interested in the implementation\n",
|
|
149
149
|
"details, they can find them in the file\n",
|
|
150
150
|
"`<root>/examples/helpers_for_basic_usage.py`."
|
|
151
151
|
]
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|