empathy-framework 3.5.3__tar.gz → 3.5.5__tar.gz

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/CHANGELOG.md

@@ -5,6 +5,49 @@ All notable changes to the Empathy Framework will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [3.5.4] - 2025-12-29
+
+### Added
+
+#### Comprehensive Test Suite Expansion
+
+- Added 30+ new test files with comprehensive coverage
+- New test modules:
+  - `test_baseline.py` - 71 tests for BaselineManager suppression system
+  - `test_graph.py` - Memory graph knowledge base tests
+  - `test_linter_parsers.py` - Multi-linter parser tests (ESLint, Pylint, MyPy, TypeScript, Clippy)
+  - `test_agent_orchestration_wizard.py` - 54 tests for agent orchestration
+  - `test_code_review_wizard.py` - 52 tests for code review wizard
+  - `test_tech_debt_wizard.py` - 39 tests for tech debt tracking
+  - `test_security_learning_wizard.py` - 35 tests for security learning
+  - `test_secure_release.py` - 31 tests for secure release pipeline
+  - `test_sync_claude.py` - 27 tests for Claude sync functionality
+  - `test_reporting.py` - 27 tests for reporting concepts
+  - `test_sbar_wizard.py` - Healthcare SBAR wizard tests
+- Integration and performance test directories (`tests/integration/`, `tests/performance/`)
+- **Project Indexing System** (`src/empathy_os/project_index/`) — JSON-based file tracking with:
+  - Automatic project structure scanning and indexing
+  - File metadata tracking (size, type, last modified)
+  - Codebase statistics and reports
+  - CrewAI integration for AI-powered analysis
+- Test maintenance workflows (`test_lifecycle.py`, `test_maintenance.py`)
+
+### Fixed
+
+- **BaselineManager**: Fixed test isolation bug where `BASELINE_SCHEMA.copy()` created shallow copies, causing nested dictionaries to be shared across test instances. Changed to `copy.deepcopy(BASELINE_SCHEMA)` for proper isolation.
+- **ESLint Parser Test**: Fixed `test_parse_eslint_text_multiple_files` - rule names must be lowercase letters and hyphens only (changed `rule-1` to `no-unused-vars`)
+- **Lint Warnings**: Fixed ambiguous variable name `l` → `line` in scanner.py
+- **Lint Warnings**: Fixed unused loop variable `pkg` → `_pkg` in test_dependency_check.py
+
+### Tests
+
+- Total tests: 5,603 passed, 72 skipped
+- Coverage: 63.65% (exceeds 25% target)
+- All workflow tests now pass with proper mocking
+- Fixed 31+ previously failing workflow tests
+
+---
+
 ## [3.5.3] - 2025-12-29
 
 ### Documentation

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: empathy-framework
-Version: 3.5.3
+Version: 3.5.5
 Summary: AI collaboration framework with persistent memory, anticipatory intelligence, code inspection, and multi-agent orchestration
 Author-email: Patrick Roebuck <patrick.roebuck@smartAImemory.com>
 Maintainer-email: Smart-AI-Memory <patrick.roebuck@smartAImemory.com>
@@ -225,6 +225,8 @@ Requires-Dist: ruff<1.0,>=0.1; extra == "dev"
 Requires-Dist: coverage<8.0,>=7.0; extra == "dev"
 Requires-Dist: bandit<2.0,>=1.7; extra == "dev"
 Requires-Dist: pre-commit<4.0,>=3.0; extra == "dev"
+Requires-Dist: httpx<1.0.0,>=0.27.0; extra == "dev"
+Requires-Dist: fastapi<1.0.0,>=0.109.1; extra == "dev"
 Provides-Extra: full
 Requires-Dist: anthropic<1.0.0,>=0.8.0; extra == "full"
 Requires-Dist: openai<2.0.0,>=1.6.0; extra == "full"
@@ -276,8 +278,8 @@ Dynamic: license-file
 **The AI collaboration framework that predicts problems before they happen.**
 
 [![PyPI](https://img.shields.io/pypi/v/empathy-framework)](https://pypi.org/project/empathy-framework/)
-[![Tests](https://img.shields.io/badge/tests-3%2C564%20passing-brightgreen)](https://github.com/Smart-AI-Memory/empathy-framework/actions)
-[![Coverage](https://img.shields.io/badge/coverage-55%25-yellow)](https://github.com/Smart-AI-Memory/empathy-framework)
+[![Tests](https://img.shields.io/badge/tests-5%2C603%20passing-brightgreen)](https://github.com/Smart-AI-Memory/empathy-framework/actions)
+[![Coverage](https://img.shields.io/badge/coverage-64%25-yellow)](https://github.com/Smart-AI-Memory/empathy-framework)
 [![License](https://img.shields.io/badge/license-Fair%20Source%200.9-blue)](LICENSE)
 [![Python](https://img.shields.io/badge/python-3.10+-blue)](https://www.python.org)
 
@@ -287,6 +289,12 @@ pip install empathy-framework[full]
 
 ## What's New in v3.5.x
 
+### Project Indexing & Test Suite Expansion (v3.5.4)
+
+- **Project Indexing System** — JSON-based file tracking with automatic structure scanning, metadata tracking, and CrewAI integration
+- **5,603 Tests** — Comprehensive test coverage at 64% with 30+ new test modules
+- **BaselineManager Fix** — Resolved test isolation bug affecting suppression system
+
 ### Memory API Security Hardening (v3.5.0)
 
 - **Input Validation** — Pattern IDs, agent IDs, and classifications validated to prevent path traversal and injection attacks

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/README.md

@@ -3,8 +3,8 @@
 **The AI collaboration framework that predicts problems before they happen.**
 
 [![PyPI](https://img.shields.io/pypi/v/empathy-framework)](https://pypi.org/project/empathy-framework/)
-[![Tests](https://img.shields.io/badge/tests-3%2C564%20passing-brightgreen)](https://github.com/Smart-AI-Memory/empathy-framework/actions)
-[![Coverage](https://img.shields.io/badge/coverage-55%25-yellow)](https://github.com/Smart-AI-Memory/empathy-framework)
+[![Tests](https://img.shields.io/badge/tests-5%2C603%20passing-brightgreen)](https://github.com/Smart-AI-Memory/empathy-framework/actions)
+[![Coverage](https://img.shields.io/badge/coverage-64%25-yellow)](https://github.com/Smart-AI-Memory/empathy-framework)
 [![License](https://img.shields.io/badge/license-Fair%20Source%200.9-blue)](LICENSE)
 [![Python](https://img.shields.io/badge/python-3.10+-blue)](https://www.python.org)
 
@@ -14,6 +14,12 @@ pip install empathy-framework[full]
 
 ## What's New in v3.5.x
 
+### Project Indexing & Test Suite Expansion (v3.5.4)
+
+- **Project Indexing System** — JSON-based file tracking with automatic structure scanning, metadata tracking, and CrewAI integration
+- **5,603 Tests** — Comprehensive test coverage at 64% with 30+ new test modules
+- **BaselineManager Fix** — Resolved test isolation bug affecting suppression system
+
 ### Memory API Security Hardening (v3.5.0)
 
 - **Input Validation** — Pattern IDs, agent IDs, and classifications validated to prevent path traversal and injection attacks

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/empathy_framework.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: empathy-framework
-Version: 3.5.3
+Version: 3.5.5
 Summary: AI collaboration framework with persistent memory, anticipatory intelligence, code inspection, and multi-agent orchestration
 Author-email: Patrick Roebuck <patrick.roebuck@smartAImemory.com>
 Maintainer-email: Smart-AI-Memory <patrick.roebuck@smartAImemory.com>
@@ -225,6 +225,8 @@ Requires-Dist: ruff<1.0,>=0.1; extra == "dev"
 Requires-Dist: coverage<8.0,>=7.0; extra == "dev"
 Requires-Dist: bandit<2.0,>=1.7; extra == "dev"
 Requires-Dist: pre-commit<4.0,>=3.0; extra == "dev"
+Requires-Dist: httpx<1.0.0,>=0.27.0; extra == "dev"
+Requires-Dist: fastapi<1.0.0,>=0.109.1; extra == "dev"
 Provides-Extra: full
 Requires-Dist: anthropic<1.0.0,>=0.8.0; extra == "full"
 Requires-Dist: openai<2.0.0,>=1.6.0; extra == "full"
@@ -276,8 +278,8 @@ Dynamic: license-file
 **The AI collaboration framework that predicts problems before they happen.**
 
 [![PyPI](https://img.shields.io/pypi/v/empathy-framework)](https://pypi.org/project/empathy-framework/)
-[![Tests](https://img.shields.io/badge/tests-3%2C564%20passing-brightgreen)](https://github.com/Smart-AI-Memory/empathy-framework/actions)
-[![Coverage](https://img.shields.io/badge/coverage-55%25-yellow)](https://github.com/Smart-AI-Memory/empathy-framework)
+[![Tests](https://img.shields.io/badge/tests-5%2C603%20passing-brightgreen)](https://github.com/Smart-AI-Memory/empathy-framework/actions)
+[![Coverage](https://img.shields.io/badge/coverage-64%25-yellow)](https://github.com/Smart-AI-Memory/empathy-framework)
 [![License](https://img.shields.io/badge/license-Fair%20Source%200.9-blue)](LICENSE)
 [![Python](https://img.shields.io/badge/python-3.10+-blue)](https://www.python.org)
 
@@ -287,6 +289,12 @@ pip install empathy-framework[full]
 
 ## What's New in v3.5.x
 
+### Project Indexing & Test Suite Expansion (v3.5.4)
+
+- **Project Indexing System** — JSON-based file tracking with automatic structure scanning, metadata tracking, and CrewAI integration
+- **5,603 Tests** — Comprehensive test coverage at 64% with 30+ new test modules
+- **BaselineManager Fix** — Resolved test isolation bug affecting suppression system
+
 ### Memory API Security Hardening (v3.5.0)
 
 - **Input Validation** — Pattern IDs, agent IDs, and classifications validated to prevent path traversal and injection attacks

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/empathy_framework.egg-info/SOURCES.txt

@@ -254,10 +254,14 @@ tests/test_advanced_debugging.py
 tests/test_agent_factory.py
 tests/test_agent_factory_memory.py
 tests/test_agent_factory_resilience.py
+tests/test_agent_orchestration_wizard.py
+tests/test_ai_collaboration_wizard.py
 tests/test_all_wizards.py
 tests/test_audit_logger.py
 tests/test_audit_logger_extended.py
+tests/test_base.py
 tests/test_base_wizard.py
+tests/test_baseline.py
 tests/test_book_chapter_wizard.py
 tests/test_book_production_agents.py
 tests/test_bug_predict_workflow.py
@@ -266,11 +270,14 @@ tests/test_claude_memory_extended.py
 tests/test_cli.py
 tests/test_clinical_protocol_monitor.py
 tests/test_code_health.py
+tests/test_code_review.py
 tests/test_code_review_crew_integration.py
 tests/test_code_review_pipeline.py
 tests/test_code_review_pipeline_workflow.py
+tests/test_code_review_wizard.py
 tests/test_code_review_workflow.py
 tests/test_config.py
+tests/test_config_loaders.py
 tests/test_control_panel.py
 tests/test_control_panel_security.py
 tests/test_coordination.py
@@ -279,8 +286,10 @@ tests/test_core_reliability.py
 tests/test_cost_tracker.py
 tests/test_coverage_analyzer.py
 tests/test_crewai_adapter.py
+tests/test_dependency_check.py
 tests/test_dependency_check_workflow.py
 tests/test_discovery.py
+tests/test_document_gen.py
 tests/test_document_gen_workflow.py
 tests/test_emergence.py
 tests/test_empathy_llm_core.py
@@ -292,19 +301,25 @@ tests/test_exceptions.py
 tests/test_executor_integration.py
 tests/test_fallback.py
 tests/test_feedback_loops.py
+tests/test_graph.py
+tests/test_health_check.py
 tests/test_health_check_workflow.py
 tests/test_intelligence_integration.py
 tests/test_levels.py
 tests/test_leverage_points.py
+tests/test_linter_parsers.py
 tests/test_llm_integration.py
 tests/test_llm_toolkit_levels.py
 tests/test_logging_config.py
+tests/test_long_term.py
 tests/test_memory_graph.py
 tests/test_model_registry.py
 tests/test_model_router.py
 tests/test_monitoring.py
+tests/test_multi_model_wizard.py
 tests/test_pattern_library.py
 tests/test_perf_audit_workflow.py
+tests/test_performance_profiling_wizard.py
 tests/test_persistence.py
 tests/test_pii_scrubber.py
 tests/test_pii_scrubber_extended.py
@@ -312,33 +327,47 @@ tests/test_platform_compat_ci.py
 tests/test_platform_utils.py
 tests/test_plugin_base.py
 tests/test_plugin_registry.py
+tests/test_pr_review.py
 tests/test_pr_review_workflow.py
 tests/test_production_smoke.py
 tests/test_progress.py
 tests/test_prompt_engineering_wizard.py
 tests/test_protocol_checker.py
 tests/test_protocol_loader.py
+tests/test_provider_config.py
 tests/test_providers.py
 tests/test_quality_analyzer.py
 tests/test_redis_bootstrap.py
+tests/test_redis_config.py
 tests/test_redis_integration.py
 tests/test_redis_memory.py
 tests/test_refactor_golden.py
 tests/test_refactor_plan_workflow.py
+tests/test_refactoring.py
 tests/test_refactoring_crew.py
+tests/test_registry.py
+tests/test_release_prep.py
+tests/test_reporting.py
+tests/test_reports.py
 tests/test_resilience.py
+tests/test_sbar_wizard.py
+tests/test_scanner.py
 tests/test_secrets_detector.py
 tests/test_secure_memdocs.py
 tests/test_secure_memdocs_extended.py
+tests/test_secure_release.py
 tests/test_secure_release_workflow.py
+tests/test_security_audit.py
 tests/test_security_audit_crew.py
 tests/test_security_audit_workflow.py
 tests/test_security_crew_integration.py
 tests/test_security_integration.py
+tests/test_security_learning_wizard.py
 tests/test_security_negative_cases.py
 tests/test_security_scan.py
 tests/test_sensor_parsers.py
 tests/test_session_status.py
+tests/test_short_term.py
 tests/test_smart_router.py
 tests/test_software_cli.py
 tests/test_software_integration.py
@@ -347,9 +376,12 @@ tests/test_software_plugin_cli.py
 tests/test_state.py
 tests/test_step_config.py
 tests/test_summary_index.py
+tests/test_sync_claude.py
+tests/test_tech_debt_wizard.py
 tests/test_telemetry.py
 tests/test_templates.py
 tests/test_test_suggester.py
+tests/test_timeout.py
 tests/test_token_estimator.py
 tests/test_trajectory_analyzer.py
 tests/test_trust_building.py

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/empathy_framework.egg-info/requires.txt

@@ -68,6 +68,8 @@ ruff<1.0,>=0.1
 coverage<8.0,>=7.0
 bandit<2.0,>=1.7
 pre-commit<4.0,>=3.0
+httpx<1.0.0,>=0.27.0
+fastapi<1.0.0,>=0.109.1
 
 [docs]
 mkdocs<2.0.0,>=1.5.0

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/empathy_llm_toolkit/__init__.py

@@ -12,7 +12,7 @@ Licensed under Fair Source 0.9
 
 from .core import EmpathyLLM
 from .levels import EmpathyLevel
-from .providers import AnthropicProvider, LocalProvider, OpenAIProvider
+from .providers import AnthropicProvider, GeminiProvider, LocalProvider, OpenAIProvider
 from .state import CollaborationState, UserPattern
 
 __version__ = "1.9.5"
@@ -21,6 +21,7 @@ __all__ = [
     "EmpathyLLM",
     "OpenAIProvider",
     "AnthropicProvider",
+    "GeminiProvider",
     "LocalProvider",
     "CollaborationState",
     "UserPattern",

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/empathy_llm_toolkit/core.py

@@ -23,7 +23,13 @@ from empathy_os.memory import (
 )
 
 from .levels import EmpathyLevel
-from .providers import AnthropicProvider, BaseLLMProvider, LocalProvider, OpenAIProvider
+from .providers import (
+    AnthropicProvider,
+    BaseLLMProvider,
+    GeminiProvider,
+    LocalProvider,
+    OpenAIProvider,
+)
 from .routing import ModelRouter
 from .state import CollaborationState, PatternType, UserPattern
 
@@ -218,6 +224,8 @@ class EmpathyLLM:
             )
         elif provider == "openai":
             return OpenAIProvider(api_key=api_key, model=model or "gpt-4-turbo-preview", **kwargs)
+        elif provider in ("google", "gemini"):
+            return GeminiProvider(api_key=api_key, model=model or "gemini-1.5-pro", **kwargs)
         elif provider == "local":
             return LocalProvider(
                 endpoint=kwargs.get("endpoint", "http://localhost:11434"),

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/empathy_llm_toolkit/providers.py

@@ -372,6 +372,183 @@ class OpenAIProvider(BaseLLMProvider):
         )
 
 
+class GeminiProvider(BaseLLMProvider):
+    """
+    Google Gemini provider with cost tracking integration.
+
+    Supports Gemini models:
+    - gemini-2.0-flash-exp: Fast, cheap tier (1M context)
+    - gemini-1.5-pro: Balanced, capable tier (2M context)
+    - gemini-2.5-pro: Premium reasoning tier
+    """
+
+    def __init__(
+        self,
+        api_key: str | None = None,
+        model: str = "gemini-1.5-pro",
+        **kwargs,
+    ):
+        super().__init__(api_key, **kwargs)
+        self.model = model
+
+        # Validate API key is provided
+        if not api_key or not api_key.strip():
+            raise ValueError(
+                "API key is required for Gemini provider. "
+                "Provide via api_key parameter or GOOGLE_API_KEY environment variable"
+            )
+
+        # Lazy import to avoid requiring google-generativeai if not used
+        try:
+            import google.generativeai as genai
+
+            genai.configure(api_key=api_key)
+            self.genai = genai
+            self.client = genai.GenerativeModel(model)
+        except ImportError as e:
+            raise ImportError(
+                "google-generativeai package required. Install with: pip install google-generativeai"
+            ) from e
+
+    async def generate(
+        self,
+        messages: list[dict[str, str]],
+        system_prompt: str | None = None,
+        temperature: float = 0.7,
+        max_tokens: int = 1024,
+        **kwargs,
+    ) -> LLMResponse:
+        """
+        Generate response using Google Gemini API.
+
+        Gemini-specific features:
+        - Large context windows (1M-2M tokens)
+        - Multimodal support
+        - Grounding with Google Search
+        """
+        import asyncio
+
+        # Convert messages to Gemini format
+        gemini_messages = []
+        for msg in messages:
+            role = "user" if msg["role"] == "user" else "model"
+            gemini_messages.append({"role": role, "parts": [msg["content"]]})
+
+        # Build generation config
+        generation_config = self.genai.GenerationConfig(
+            temperature=temperature,
+            max_output_tokens=max_tokens,
+        )
+
+        # Create model with system instruction if provided
+        if system_prompt:
+            model = self.genai.GenerativeModel(
+                self.model,
+                system_instruction=system_prompt,
+            )
+        else:
+            model = self.client
+
+        # Call Gemini API (run sync in thread pool for async compatibility)
+        loop = asyncio.get_event_loop()
+        response = await loop.run_in_executor(
+            None,
+            lambda: model.generate_content(
+                gemini_messages,
+                generation_config=generation_config,
+            ),
+        )
+
+        # Extract token counts from usage metadata
+        input_tokens = 0
+        output_tokens = 0
+        if hasattr(response, "usage_metadata"):
+            input_tokens = getattr(response.usage_metadata, "prompt_token_count", 0)
+            output_tokens = getattr(response.usage_metadata, "candidates_token_count", 0)
+
+        # Log to cost tracker
+        try:
+            from empathy_os.cost_tracker import log_request
+
+            tier = self._get_tier()
+            log_request(
+                model=self.model,
+                input_tokens=input_tokens,
+                output_tokens=output_tokens,
+                task_type=kwargs.get("task_type", "gemini_generate"),
+                tier=tier,
+            )
+        except ImportError:
+            pass  # Cost tracking not available
+
+        # Convert to standardized format
+        content = ""
+        if response.candidates:
+            content = response.candidates[0].content.parts[0].text
+
+        finish_reason = "stop"
+        if response.candidates and hasattr(response.candidates[0], "finish_reason"):
+            finish_reason = str(response.candidates[0].finish_reason.name).lower()
+
+        return LLMResponse(
+            content=content,
+            model=self.model,
+            tokens_used=input_tokens + output_tokens,
+            finish_reason=finish_reason,
+            metadata={
+                "input_tokens": input_tokens,
+                "output_tokens": output_tokens,
+                "provider": "google",
+                "model_family": "gemini",
+            },
+        )
+
+    def _get_tier(self) -> str:
+        """Determine tier from model name."""
+        if "flash" in self.model.lower():
+            return "cheap"
+        elif "2.5" in self.model or "ultra" in self.model.lower():
+            return "premium"
+        else:
+            return "capable"
+
+    def get_model_info(self) -> dict[str, Any]:
+        """Get Gemini model information"""
+        model_info = {
+            "gemini-2.0-flash-exp": {
+                "max_tokens": 1000000,
+                "cost_per_1m_input": 0.075,
+                "cost_per_1m_output": 0.30,
+                "supports_vision": True,
+                "ideal_for": "Fast responses, simple tasks, large context",
+            },
+            "gemini-1.5-pro": {
+                "max_tokens": 2000000,
+                "cost_per_1m_input": 1.25,
+                "cost_per_1m_output": 5.00,
+                "supports_vision": True,
+                "ideal_for": "Complex reasoning, large codebases",
+            },
+            "gemini-2.5-pro": {
+                "max_tokens": 1000000,
+                "cost_per_1m_input": 2.50,
+                "cost_per_1m_output": 10.00,
+                "supports_vision": True,
+                "ideal_for": "Advanced reasoning, complex tasks",
+            },
+        }
+
+        return model_info.get(
+            self.model,
+            {
+                "max_tokens": 1000000,
+                "cost_per_1m_input": 1.25,
+                "cost_per_1m_output": 5.00,
+                "supports_vision": True,
+            },
+        )
+
+
 class LocalProvider(BaseLLMProvider):
     """
     Local model provider (Ollama, LM Studio, etc.).

{empathy_framework-3.5.3 → empathy_framework-3.5.5}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "empathy-framework"
-version = "3.5.3"
+version = "3.5.5"
 description = "AI collaboration framework with persistent memory, anticipatory intelligence, code inspection, and multi-agent orchestration"
 readme = {file = "README.md", content-type = "text/markdown"}
 requires-python = ">=3.10"
@@ -137,6 +137,9 @@ dev = [
     "coverage>=7.0,<8.0",
     "bandit>=1.7,<2.0",
     "pre-commit>=3.0,<4.0",
+    # Test dependencies for API and integration tests
+    "httpx>=0.27.0,<1.0.0",  # For API testing
+    "fastapi>=0.109.1,<1.0.0",  # For wizard API tests
 ]
 
 # Complete installation with Claude Code + MemDocs transformative stack
@@ -358,6 +361,7 @@ markers = [
     "security: marks tests as security-focused",
     "performance: marks tests as performance benchmarks",
     "llm: marks tests that require LLM API access",
+    "network: marks tests that require network/internet access (skip in CI with '-m \"not network\"')",
 ]
 filterwarnings = [
     "ignore::DeprecationWarning",
@@ -391,6 +395,3 @@ exclude_lines = [
     "class .*\\bProtocol\\):",
     "@(abc\\.)?abstractmethod",
 ]
-
-[tool.coverage.html]
-directory = "htmlcov"