emmet-builders 0.84.7rc0__tar.gz → 0.84.7rc2__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of emmet-builders might be problematic. Click here for more details.
- {emmet_builders-0.84.7rc0/emmet_builders.egg-info → emmet_builders-0.84.7rc2}/PKG-INFO +1 -1
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/ml.py +18 -2
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2/emmet_builders.egg-info}/PKG-INFO +1 -1
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet_builders.egg-info/SOURCES.txt +2 -2
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/requirements/ubuntu-latest_py3.11.txt +52 -75
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/requirements/ubuntu-latest_py3.11_extras.txt +102 -120
- emmet_builders-0.84.7rc0/requirements/ubuntu-latest_py3.10.txt → emmet_builders-0.84.7rc2/requirements/ubuntu-latest_py3.12.txt +54 -81
- emmet_builders-0.84.7rc0/requirements/ubuntu-latest_py3.10_extras.txt → emmet_builders-0.84.7rc2/requirements/ubuntu-latest_py3.12_extras.txt +104 -133
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/MANIFEST.in +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/abinit/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/abinit/phonon.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/abinit/sound_velocity.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/feff/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/feff/xas.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/absorption_spectrum.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/alloys.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/basic_descriptors.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/bonds.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/chemenv.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/corrected_entries.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/dielectric.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/elasticity.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/electrodes.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/electronic_structure.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/magnetism.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/optimade.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/oxidation_states.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/piezoelectric.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/provenance.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/robocrys.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/similarity.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/substrates.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/summary.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/materials/thermo.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/matscholar/missing_compositions.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/mobility/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/mobility/migration_graph.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/atomic.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/bonds.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/electric.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/metal_binding.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/orbitals.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/redox.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/summary.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/thermo.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/trajectory.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/molecules/vibration.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/qchem/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/qchem/molecules.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/settings.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/utils.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/vasp/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/vasp/materials.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/vasp/mp_potcar_stats.json.gz +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet/builders/vasp/task_validator.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet_builders.egg-info/dependency_links.txt +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet_builders.egg-info/not-zip-safe +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet_builders.egg-info/requires.txt +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/emmet_builders.egg-info/top_level.txt +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/requirements/deployment.txt +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/setup.cfg +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/setup.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/conftest.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/__init__.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_atomic.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_bonds.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_electric.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_metal_binding.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_orbitals.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_redox.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_summary.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_thermo.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_trajectory.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/molecules/test_vibration.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_absorption.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_basic_descriptors.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_chemenv.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_corrected_entries_thermo.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_dielectric.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_elasticity.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_electronic_structure.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_magnetism.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_materials.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_ml.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_mobility.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_oxidation.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_piezoelectric.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_qchem.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_similarity.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_summary.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_utils.py +0 -0
- {emmet_builders-0.84.7rc0 → emmet_builders-0.84.7rc2}/tests/test_vasp.py +0 -0
|
@@ -3,14 +3,26 @@ from typing import TYPE_CHECKING, Optional, Union
|
|
|
3
3
|
|
|
4
4
|
from maggma.builders.map_builder import MapBuilder
|
|
5
5
|
from maggma.core import Store
|
|
6
|
-
|
|
6
|
+
|
|
7
|
+
try:
|
|
8
|
+
from matcalc import PESCalculator
|
|
9
|
+
|
|
10
|
+
matcalc_installed = True
|
|
11
|
+
except ImportError:
|
|
12
|
+
matcalc_installed = False
|
|
13
|
+
|
|
7
14
|
from pymatgen.core import Structure
|
|
8
15
|
|
|
9
16
|
from emmet.core.ml import MLDoc
|
|
10
17
|
from emmet.core.utils import jsanitize
|
|
11
18
|
|
|
12
19
|
if TYPE_CHECKING:
|
|
13
|
-
|
|
20
|
+
try:
|
|
21
|
+
from ase.calculators.calculator import Calculator
|
|
22
|
+
|
|
23
|
+
ase_installed = True
|
|
24
|
+
except ImportError:
|
|
25
|
+
ase_installed = False
|
|
14
26
|
|
|
15
27
|
|
|
16
28
|
class MLBuilder(MapBuilder):
|
|
@@ -40,6 +52,10 @@ class MLBuilder(MapBuilder):
|
|
|
40
52
|
MLDocs. Will be saved in each document so use sparingly. Defaults to None.
|
|
41
53
|
Set to {} to disable default provenance model, version, matcalc_version.
|
|
42
54
|
"""
|
|
55
|
+
|
|
56
|
+
if not matcalc_installed or not ase_installed:
|
|
57
|
+
raise ImportError("Please `pip install matcalc` to use the MLBuilder.")
|
|
58
|
+
|
|
43
59
|
self.materials = materials
|
|
44
60
|
self.ml_potential = ml_potential
|
|
45
61
|
self.kwargs = kwargs
|
|
@@ -57,10 +57,10 @@ emmet_builders.egg-info/not-zip-safe
|
|
|
57
57
|
emmet_builders.egg-info/requires.txt
|
|
58
58
|
emmet_builders.egg-info/top_level.txt
|
|
59
59
|
requirements/deployment.txt
|
|
60
|
-
requirements/ubuntu-latest_py3.10.txt
|
|
61
|
-
requirements/ubuntu-latest_py3.10_extras.txt
|
|
62
60
|
requirements/ubuntu-latest_py3.11.txt
|
|
63
61
|
requirements/ubuntu-latest_py3.11_extras.txt
|
|
62
|
+
requirements/ubuntu-latest_py3.12.txt
|
|
63
|
+
requirements/ubuntu-latest_py3.12_extras.txt
|
|
64
64
|
tests/__init__.py
|
|
65
65
|
tests/conftest.py
|
|
66
66
|
tests/test_absorption.py
|
|
@@ -8,7 +8,7 @@ aioitertools==0.12.0
|
|
|
8
8
|
# via maggma
|
|
9
9
|
annotated-types==0.7.0
|
|
10
10
|
# via pydantic
|
|
11
|
-
ase==3.
|
|
11
|
+
ase==3.25.0
|
|
12
12
|
# via
|
|
13
13
|
# matcalc
|
|
14
14
|
# pymatgen-analysis-diffusion
|
|
@@ -19,23 +19,23 @@ attrs==25.3.0
|
|
|
19
19
|
# referencing
|
|
20
20
|
bcrypt==4.3.0
|
|
21
21
|
# via paramiko
|
|
22
|
-
boto3==1.
|
|
22
|
+
boto3==1.38.29
|
|
23
23
|
# via maggma
|
|
24
|
-
botocore==1.
|
|
24
|
+
botocore==1.38.29
|
|
25
25
|
# via
|
|
26
26
|
# boto3
|
|
27
27
|
# s3transfer
|
|
28
|
-
certifi==2025.
|
|
28
|
+
certifi==2025.4.26
|
|
29
29
|
# via requests
|
|
30
30
|
cffi==1.17.1
|
|
31
31
|
# via
|
|
32
32
|
# cryptography
|
|
33
33
|
# pynacl
|
|
34
|
-
charset-normalizer==3.4.
|
|
34
|
+
charset-normalizer==3.4.2
|
|
35
35
|
# via requests
|
|
36
|
-
contourpy==1.3.
|
|
36
|
+
contourpy==1.3.2
|
|
37
37
|
# via matplotlib
|
|
38
|
-
cryptography==
|
|
38
|
+
cryptography==45.0.3
|
|
39
39
|
# via paramiko
|
|
40
40
|
cycler==0.12.1
|
|
41
41
|
# via matplotlib
|
|
@@ -43,22 +43,18 @@ dnspython==2.7.0
|
|
|
43
43
|
# via
|
|
44
44
|
# maggma
|
|
45
45
|
# pymongo
|
|
46
|
-
emmet-core[all]==0.84.
|
|
47
|
-
# via
|
|
48
|
-
# emmet-builders (setup.py)
|
|
49
|
-
# mp-api
|
|
46
|
+
emmet-core[all]==0.84.6
|
|
47
|
+
# via emmet-builders (setup.py)
|
|
50
48
|
filelock==3.18.0
|
|
51
49
|
# via mdanalysis
|
|
52
|
-
fonttools==4.
|
|
50
|
+
fonttools==4.58.1
|
|
53
51
|
# via matplotlib
|
|
54
|
-
fsspec==2025.
|
|
52
|
+
fsspec==2025.5.1
|
|
55
53
|
# via matcalc
|
|
56
54
|
griddataformats==1.0.2
|
|
57
55
|
# via mdanalysis
|
|
58
56
|
h5py==3.13.0
|
|
59
|
-
# via
|
|
60
|
-
# phono3py
|
|
61
|
-
# phonopy
|
|
57
|
+
# via phonopy
|
|
62
58
|
idna==3.10
|
|
63
59
|
# via requests
|
|
64
60
|
imageio==2.37.0
|
|
@@ -71,7 +67,7 @@ jmespath==1.0.1
|
|
|
71
67
|
# via
|
|
72
68
|
# boto3
|
|
73
69
|
# botocore
|
|
74
|
-
joblib==1.
|
|
70
|
+
joblib==1.5.1
|
|
75
71
|
# via
|
|
76
72
|
# matcalc
|
|
77
73
|
# mdanalysis
|
|
@@ -80,9 +76,9 @@ joblib==1.4.2
|
|
|
80
76
|
# scikit-learn
|
|
81
77
|
jsonlines==4.0.0
|
|
82
78
|
# via maggma
|
|
83
|
-
jsonschema==4.
|
|
79
|
+
jsonschema==4.24.0
|
|
84
80
|
# via maggma
|
|
85
|
-
jsonschema-specifications==
|
|
81
|
+
jsonschema-specifications==2025.4.1
|
|
86
82
|
# via jsonschema
|
|
87
83
|
kiwisolver==1.4.8
|
|
88
84
|
# via matplotlib
|
|
@@ -91,20 +87,17 @@ latexcodec==3.0.0
|
|
|
91
87
|
lazy-loader==0.4
|
|
92
88
|
# via scikit-image
|
|
93
89
|
maggma==0.71.5
|
|
94
|
-
# via
|
|
95
|
-
|
|
96
|
-
# mp-api
|
|
97
|
-
matcalc==0.3.2
|
|
90
|
+
# via emmet-builders (setup.py)
|
|
91
|
+
matcalc==0.3.1
|
|
98
92
|
# via emmet-core
|
|
99
93
|
matminer==0.9.3
|
|
100
94
|
# via
|
|
101
95
|
# emmet-builders (setup.py)
|
|
102
96
|
# robocrys
|
|
103
|
-
matplotlib==3.10.
|
|
97
|
+
matplotlib==3.10.3
|
|
104
98
|
# via
|
|
105
99
|
# ase
|
|
106
100
|
# mdanalysis
|
|
107
|
-
# phono3py
|
|
108
101
|
# phonopy
|
|
109
102
|
# pymatgen
|
|
110
103
|
# seaborn
|
|
@@ -125,13 +118,10 @@ monty==2025.3.3
|
|
|
125
118
|
# emmet-core
|
|
126
119
|
# maggma
|
|
127
120
|
# matminer
|
|
128
|
-
# mp-api
|
|
129
121
|
# pymatgen
|
|
130
122
|
# robocrys
|
|
131
|
-
more-itertools==10.
|
|
123
|
+
more-itertools==10.7.0
|
|
132
124
|
# via inflect
|
|
133
|
-
mp-api==0.45.3
|
|
134
|
-
# via robocrys
|
|
135
125
|
mp-pyrho==0.4.5
|
|
136
126
|
# via pymatgen-analysis-defects
|
|
137
127
|
mpmath==1.3.0
|
|
@@ -142,10 +132,9 @@ msgpack==1.1.0
|
|
|
142
132
|
# via
|
|
143
133
|
# maggma
|
|
144
134
|
# mmtf-python
|
|
145
|
-
|
|
146
|
-
narwhals==1.32.0
|
|
135
|
+
narwhals==1.41.0
|
|
147
136
|
# via plotly
|
|
148
|
-
networkx==3.
|
|
137
|
+
networkx==3.5
|
|
149
138
|
# via
|
|
150
139
|
# pymatgen
|
|
151
140
|
# robocrys
|
|
@@ -154,7 +143,6 @@ numpy==1.26.4
|
|
|
154
143
|
# via
|
|
155
144
|
# ase
|
|
156
145
|
# contourpy
|
|
157
|
-
# emmet-core
|
|
158
146
|
# griddataformats
|
|
159
147
|
# h5py
|
|
160
148
|
# imageio
|
|
@@ -167,7 +155,6 @@ numpy==1.26.4
|
|
|
167
155
|
# mrcfile
|
|
168
156
|
# pandas
|
|
169
157
|
# patsy
|
|
170
|
-
# phono3py
|
|
171
158
|
# phonopy
|
|
172
159
|
# pymatgen
|
|
173
160
|
# pymatgen-analysis-defects
|
|
@@ -185,9 +172,9 @@ numpy==1.26.4
|
|
|
185
172
|
# statsmodels
|
|
186
173
|
# symfc
|
|
187
174
|
# tifffile
|
|
188
|
-
orjson==3.10.
|
|
175
|
+
orjson==3.10.18
|
|
189
176
|
# via maggma
|
|
190
|
-
packaging==
|
|
177
|
+
packaging==25.0
|
|
191
178
|
# via
|
|
192
179
|
# lazy-loader
|
|
193
180
|
# matplotlib
|
|
@@ -211,23 +198,19 @@ paramiko==3.5.1
|
|
|
211
198
|
# via sshtunnel
|
|
212
199
|
patsy==1.0.1
|
|
213
200
|
# via statsmodels
|
|
214
|
-
|
|
201
|
+
phonopy==2.38.2
|
|
215
202
|
# via matcalc
|
|
216
|
-
|
|
217
|
-
# via
|
|
218
|
-
# matcalc
|
|
219
|
-
# phono3py
|
|
220
|
-
pillow==11.1.0
|
|
203
|
+
pillow==11.2.1
|
|
221
204
|
# via
|
|
222
205
|
# imageio
|
|
223
206
|
# matplotlib
|
|
224
207
|
# rdkit
|
|
225
208
|
# scikit-image
|
|
226
|
-
plotly==6.
|
|
209
|
+
plotly==6.1.2
|
|
227
210
|
# via
|
|
228
211
|
# pymatgen
|
|
229
212
|
# solvation-analysis
|
|
230
|
-
pluggy==1.
|
|
213
|
+
pluggy==1.6.0
|
|
231
214
|
# via pytest
|
|
232
215
|
pubchempy==1.0.4
|
|
233
216
|
# via robocrys
|
|
@@ -238,25 +221,26 @@ pybtex==0.24.0
|
|
|
238
221
|
# robocrys
|
|
239
222
|
pycparser==2.22
|
|
240
223
|
# via cffi
|
|
241
|
-
pydantic==2.11.
|
|
224
|
+
pydantic==2.11.5
|
|
242
225
|
# via
|
|
243
226
|
# emmet-core
|
|
244
227
|
# maggma
|
|
245
228
|
# pydantic-settings
|
|
246
|
-
pydantic-core==2.33.
|
|
229
|
+
pydantic-core==2.33.2
|
|
247
230
|
# via pydantic
|
|
248
|
-
pydantic-settings==2.
|
|
231
|
+
pydantic-settings==2.9.1
|
|
249
232
|
# via
|
|
250
233
|
# emmet-core
|
|
251
234
|
# maggma
|
|
252
235
|
pydash==8.0.5
|
|
253
236
|
# via maggma
|
|
254
|
-
|
|
237
|
+
pygments==2.19.1
|
|
238
|
+
# via pytest
|
|
239
|
+
pymatgen==2025.1.9
|
|
255
240
|
# via
|
|
256
241
|
# emmet-core
|
|
257
242
|
# matcalc
|
|
258
243
|
# matminer
|
|
259
|
-
# mp-api
|
|
260
244
|
# mp-pyrho
|
|
261
245
|
# pymatgen-analysis-alloys
|
|
262
246
|
# pymatgen-analysis-defects
|
|
@@ -276,7 +260,7 @@ pynacl==1.5.0
|
|
|
276
260
|
# via paramiko
|
|
277
261
|
pyparsing==3.2.3
|
|
278
262
|
# via matplotlib
|
|
279
|
-
pytest==8.
|
|
263
|
+
pytest==8.4.0
|
|
280
264
|
# via solvation-analysis
|
|
281
265
|
python-dateutil==2.9.0.post0
|
|
282
266
|
# via
|
|
@@ -292,12 +276,11 @@ pytz==2025.2
|
|
|
292
276
|
# pandas
|
|
293
277
|
pyyaml==6.0.2
|
|
294
278
|
# via
|
|
295
|
-
# phono3py
|
|
296
279
|
# phonopy
|
|
297
280
|
# pybtex
|
|
298
|
-
pyzmq==26.
|
|
281
|
+
pyzmq==26.4.0
|
|
299
282
|
# via maggma
|
|
300
|
-
rdkit==
|
|
283
|
+
rdkit==2025.3.2
|
|
301
284
|
# via solvation-analysis
|
|
302
285
|
referencing==0.36.2
|
|
303
286
|
# via
|
|
@@ -306,15 +289,14 @@ referencing==0.36.2
|
|
|
306
289
|
requests==2.32.3
|
|
307
290
|
# via
|
|
308
291
|
# matminer
|
|
309
|
-
# mp-api
|
|
310
292
|
# pymatgen
|
|
311
|
-
robocrys==0.2.
|
|
293
|
+
robocrys==0.2.11
|
|
312
294
|
# via emmet-core
|
|
313
|
-
rpds-py==0.
|
|
295
|
+
rpds-py==0.25.1
|
|
314
296
|
# via
|
|
315
297
|
# jsonschema
|
|
316
298
|
# referencing
|
|
317
|
-
ruamel-yaml==0.18.
|
|
299
|
+
ruamel-yaml==0.18.12
|
|
318
300
|
# via
|
|
319
301
|
# maggma
|
|
320
302
|
# monty
|
|
@@ -322,7 +304,7 @@ ruamel-yaml==0.18.10
|
|
|
322
304
|
# robocrys
|
|
323
305
|
ruamel-yaml-clib==0.2.12
|
|
324
306
|
# via ruamel-yaml
|
|
325
|
-
s3transfer==0.
|
|
307
|
+
s3transfer==0.13.0
|
|
326
308
|
# via boto3
|
|
327
309
|
scikit-image==0.25.2
|
|
328
310
|
# via pymatgen-analysis-defects
|
|
@@ -330,12 +312,11 @@ scikit-learn==1.6.1
|
|
|
330
312
|
# via
|
|
331
313
|
# matcalc
|
|
332
314
|
# matminer
|
|
333
|
-
scipy==1.15.
|
|
315
|
+
scipy==1.15.3
|
|
334
316
|
# via
|
|
335
317
|
# ase
|
|
336
318
|
# griddataformats
|
|
337
319
|
# mdanalysis
|
|
338
|
-
# phono3py
|
|
339
320
|
# pymatgen
|
|
340
321
|
# robocrys
|
|
341
322
|
# scikit-image
|
|
@@ -349,21 +330,18 @@ seekpath==2.1.0
|
|
|
349
330
|
# via emmet-core
|
|
350
331
|
sentinels==1.0.0
|
|
351
332
|
# via mongomock
|
|
352
|
-
shapely==2.
|
|
333
|
+
shapely==2.1.1
|
|
353
334
|
# via pymatgen-analysis-alloys
|
|
354
335
|
six==1.17.0
|
|
355
336
|
# via
|
|
356
337
|
# pybtex
|
|
357
338
|
# python-dateutil
|
|
358
|
-
smart-open==7.1.0
|
|
359
|
-
# via mp-api
|
|
360
339
|
solvation-analysis==0.4.1
|
|
361
340
|
# via
|
|
362
341
|
# emmet-builders (setup.py)
|
|
363
342
|
# emmet-core
|
|
364
343
|
spglib==2.6.0
|
|
365
344
|
# via
|
|
366
|
-
# phono3py
|
|
367
345
|
# phonopy
|
|
368
346
|
# pymatgen
|
|
369
347
|
# robocrys
|
|
@@ -373,9 +351,9 @@ sshtunnel==0.4.0
|
|
|
373
351
|
# via maggma
|
|
374
352
|
statsmodels==0.14.4
|
|
375
353
|
# via solvation-analysis
|
|
376
|
-
symfc==1.
|
|
354
|
+
symfc==1.4.0
|
|
377
355
|
# via phonopy
|
|
378
|
-
sympy==1.
|
|
356
|
+
sympy==1.14.0
|
|
379
357
|
# via
|
|
380
358
|
# matminer
|
|
381
359
|
# pymatgen
|
|
@@ -385,7 +363,7 @@ threadpoolctl==3.6.0
|
|
|
385
363
|
# via
|
|
386
364
|
# mdanalysis
|
|
387
365
|
# scikit-learn
|
|
388
|
-
tifffile==2025.
|
|
366
|
+
tifffile==2025.6.1
|
|
389
367
|
# via scikit-image
|
|
390
368
|
tqdm==4.67.1
|
|
391
369
|
# via
|
|
@@ -395,10 +373,9 @@ tqdm==4.67.1
|
|
|
395
373
|
# pymatgen
|
|
396
374
|
typeguard==4.4.2
|
|
397
375
|
# via inflect
|
|
398
|
-
typing-extensions==4.
|
|
376
|
+
typing-extensions==4.14.0
|
|
399
377
|
# via
|
|
400
378
|
# emmet-core
|
|
401
|
-
# mp-api
|
|
402
379
|
# pydantic
|
|
403
380
|
# pydantic-core
|
|
404
381
|
# pydash
|
|
@@ -406,18 +383,18 @@ typing-extensions==4.13.0
|
|
|
406
383
|
# spglib
|
|
407
384
|
# typeguard
|
|
408
385
|
# typing-inspection
|
|
409
|
-
typing-inspection==0.4.
|
|
410
|
-
# via
|
|
386
|
+
typing-inspection==0.4.1
|
|
387
|
+
# via
|
|
388
|
+
# pydantic
|
|
389
|
+
# pydantic-settings
|
|
411
390
|
tzdata==2025.2
|
|
412
391
|
# via pandas
|
|
413
|
-
uncertainties==3.2.
|
|
392
|
+
uncertainties==3.2.3
|
|
414
393
|
# via pymatgen
|
|
415
|
-
urllib3==2.
|
|
394
|
+
urllib3==2.4.0
|
|
416
395
|
# via
|
|
417
396
|
# botocore
|
|
418
397
|
# requests
|
|
419
|
-
wrapt==1.17.2
|
|
420
|
-
# via smart-open
|
|
421
398
|
|
|
422
399
|
# The following packages are considered to be unsafe in a requirements file:
|
|
423
400
|
# setuptools
|