emmet-builders 0.84.6rc5__tar.gz → 0.84.7rc0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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- {emmet_builders-0.84.6rc5/emmet_builders.egg-info → emmet_builders-0.84.7rc0}/PKG-INFO +2 -2
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/ml.py +2 -2
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/vasp/materials.py +1 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0/emmet_builders.egg-info}/PKG-INFO +2 -2
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/requirements/ubuntu-latest_py3.10.txt +57 -50
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/requirements/ubuntu-latest_py3.10_extras.txt +82 -79
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/requirements/ubuntu-latest_py3.11.txt +57 -50
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/requirements/ubuntu-latest_py3.11_extras.txt +82 -79
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/MANIFEST.in +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/abinit/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/abinit/phonon.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/abinit/sound_velocity.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/feff/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/feff/xas.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/absorption_spectrum.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/alloys.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/basic_descriptors.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/bonds.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/chemenv.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/corrected_entries.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/dielectric.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/elasticity.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/electrodes.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/electronic_structure.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/magnetism.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/optimade.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/oxidation_states.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/piezoelectric.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/provenance.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/robocrys.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/similarity.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/substrates.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/summary.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/materials/thermo.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/matscholar/missing_compositions.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/mobility/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/mobility/migration_graph.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/atomic.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/bonds.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/electric.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/metal_binding.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/orbitals.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/redox.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/summary.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/thermo.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/trajectory.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/molecules/vibration.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/qchem/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/qchem/molecules.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/settings.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/utils.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/vasp/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/vasp/mp_potcar_stats.json.gz +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet/builders/vasp/task_validator.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet_builders.egg-info/SOURCES.txt +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet_builders.egg-info/dependency_links.txt +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet_builders.egg-info/not-zip-safe +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet_builders.egg-info/requires.txt +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/emmet_builders.egg-info/top_level.txt +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/requirements/deployment.txt +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/setup.cfg +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/setup.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/conftest.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/__init__.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_atomic.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_bonds.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_electric.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_metal_binding.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_orbitals.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_redox.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_summary.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_thermo.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_trajectory.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/molecules/test_vibration.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_absorption.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_basic_descriptors.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_chemenv.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_corrected_entries_thermo.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_dielectric.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_elasticity.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_electronic_structure.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_magnetism.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_materials.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_ml.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_mobility.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_oxidation.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_piezoelectric.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_qchem.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_similarity.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_summary.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_utils.py +0 -0
- {emmet_builders-0.84.6rc5 → emmet_builders-0.84.7rc0}/tests/test_vasp.py +0 -0
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@@ -3,7 +3,7 @@ from typing import TYPE_CHECKING, Optional, Union
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from maggma.builders.map_builder import MapBuilder
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from maggma.core import Store
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from matcalc
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from matcalc import PESCalculator
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from pymatgen.core import Structure
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from emmet.core.ml import MLDoc
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@@ -43,7 +43,7 @@ class MLBuilder(MapBuilder):
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self.materials = materials
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self.ml_potential = ml_potential
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self.kwargs = kwargs
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self.model =
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self.model = PESCalculator.load_universal(model, **(model_kwargs or {}))
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self.prop_kwargs = prop_kwargs or {}
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if provenance == {}:
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# needed for run_type and task_type
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"calcs_reversed.input.parameters",
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"calcs_reversed.input.incar",
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"calcs_reversed.run_type",
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"orig_inputs",
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"input.structure",
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# needed for entry from task_doc
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# via
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# matcalc
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# pymatgen-analysis-diffusion
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attrs==25.
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attrs==25.3.0
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# via
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# jsonlines
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# jsonschema
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# referencing
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bcrypt==4.
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bcrypt==4.3.0
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# via paramiko
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boto3==1.
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boto3==1.37.23
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# via maggma
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botocore==1.
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botocore==1.37.23
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# via
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# boto3
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# s3transfer
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# via requests
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contourpy==1.3.1
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# via matplotlib
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cryptography==44.0.
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# via paramiko
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# via matplotlib
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# mp-api
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# via pytest
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filelock==3.18.0
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# via mdanalysis
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# via matplotlib
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# via matcalc
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# via
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# via
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# phono3py
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# via requests
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# via
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# via plotly
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@@ -162,14 +161,15 @@ numpy==1.26.4
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# h5py
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# matcalc
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# matminer
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# matplotlib
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# mdanalysis
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# monty
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# mrcfile
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# pandas
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# pathsimanalysis
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# patsy
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# phono3py
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# pymatgen-analysis-defects
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@@ -187,8 +187,7 @@ numpy==1.26.4
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# statsmodels
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# symfc
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# tifffile
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orjson==3.10.15
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orjson==3.10.16
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# via maggma
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packaging==24.2
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# via
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@@ -212,19 +211,21 @@ pandas==2.2.3
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paramiko==3.5.1
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pathsimanalysis==1.2.0
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# via mdanalysis
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phono3py==3.15.0
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phonopy==2.38.0
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# via
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# matcalc
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# phono3py
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pillow==11.1.0
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# via
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# imageio
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# matplotlib
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# rdkit
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plotly==6.0.
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plotly==6.0.1
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# via
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# pymatgen
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# solvation-analysis
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@@ -239,20 +240,20 @@ pybtex==0.24.0
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# robocrys
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pycparser==2.22
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# via cffi
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pydantic==2.
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pydantic==2.11.1
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# via
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# emmet-core
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# maggma
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# pydantic-settings
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pydantic-core==2.
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pydantic-core==2.33.0
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# via pydantic
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pydantic-settings==2.
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+
pydantic-settings==2.8.1
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# via
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# emmet-core
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# maggma
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pydash==8.0.5
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# via maggma
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-
pymatgen==2025.
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+
pymatgen==2025.3.10
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# via
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# emmet-core
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# matcalc
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@@ -275,9 +276,9 @@ pymongo==4.10.1
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# matminer
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# via paramiko
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pyparsing==3.2.
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+
pyparsing==3.2.3
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# via matplotlib
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pytest==8.3.
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+
pytest==8.3.5
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# via solvation-analysis
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python-dateutil==2.9.0.post0
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# via
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@@ -285,19 +286,20 @@ python-dateutil==2.9.0.post0
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# maggma
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# matplotlib
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# pandas
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288
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-
python-dotenv==1.0
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+
python-dotenv==1.1.0
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# via pydantic-settings
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290
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-
pytz==2025.
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+
pytz==2025.2
|
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# via
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292
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# mongomock
|
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293
294
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# pandas
|
|
294
295
|
pyyaml==6.0.2
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295
296
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# via
|
|
297
|
+
# phono3py
|
|
296
298
|
# phonopy
|
|
297
299
|
# pybtex
|
|
298
|
-
pyzmq==26.
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|
300
|
+
pyzmq==26.3.0
|
|
299
301
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# via maggma
|
|
300
|
-
rdkit==2024.9.
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|
302
|
+
rdkit==2024.9.6
|
|
301
303
|
# via solvation-analysis
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302
304
|
referencing==0.36.2
|
|
303
305
|
# via
|
|
@@ -310,7 +312,7 @@ requests==2.32.3
|
|
|
310
312
|
# pymatgen
|
|
311
313
|
robocrys==0.2.10
|
|
312
314
|
# via emmet-core
|
|
313
|
-
rpds-py==0.
|
|
315
|
+
rpds-py==0.24.0
|
|
314
316
|
# via
|
|
315
317
|
# jsonschema
|
|
316
318
|
# referencing
|
|
@@ -322,18 +324,20 @@ ruamel-yaml==0.18.10
|
|
|
322
324
|
# robocrys
|
|
323
325
|
ruamel-yaml-clib==0.2.12
|
|
324
326
|
# via ruamel-yaml
|
|
325
|
-
s3transfer==0.11.
|
|
327
|
+
s3transfer==0.11.4
|
|
326
328
|
# via boto3
|
|
327
329
|
scikit-image==0.25.2
|
|
328
330
|
# via pymatgen-analysis-defects
|
|
329
331
|
scikit-learn==1.6.1
|
|
330
|
-
# via
|
|
332
|
+
# via
|
|
333
|
+
# matcalc
|
|
334
|
+
# matminer
|
|
331
335
|
scipy==1.15.2
|
|
332
336
|
# via
|
|
333
337
|
# ase
|
|
334
338
|
# griddataformats
|
|
335
339
|
# mdanalysis
|
|
336
|
-
#
|
|
340
|
+
# phono3py
|
|
337
341
|
# pymatgen
|
|
338
342
|
# robocrys
|
|
339
343
|
# scikit-image
|
|
@@ -359,8 +363,9 @@ solvation-analysis==0.4.1
|
|
|
359
363
|
# via
|
|
360
364
|
# emmet-builders (setup.py)
|
|
361
365
|
# emmet-core
|
|
362
|
-
spglib==2.
|
|
366
|
+
spglib==2.6.0
|
|
363
367
|
# via
|
|
368
|
+
# phono3py
|
|
364
369
|
# phonopy
|
|
365
370
|
# pymatgen
|
|
366
371
|
# robocrys
|
|
@@ -370,7 +375,7 @@ sshtunnel==0.4.0
|
|
|
370
375
|
# via maggma
|
|
371
376
|
statsmodels==0.14.4
|
|
372
377
|
# via solvation-analysis
|
|
373
|
-
symfc==1.3.
|
|
378
|
+
symfc==1.3.4
|
|
374
379
|
# via phonopy
|
|
375
380
|
sympy==1.13.3
|
|
376
381
|
# via
|
|
@@ -378,11 +383,11 @@ sympy==1.13.3
|
|
|
378
383
|
# pymatgen
|
|
379
384
|
tabulate==0.9.0
|
|
380
385
|
# via pymatgen
|
|
381
|
-
threadpoolctl==3.
|
|
386
|
+
threadpoolctl==3.6.0
|
|
382
387
|
# via
|
|
383
388
|
# mdanalysis
|
|
384
389
|
# scikit-learn
|
|
385
|
-
tifffile==2025.
|
|
390
|
+
tifffile==2025.3.30
|
|
386
391
|
# via scikit-image
|
|
387
392
|
tomli==2.2.1
|
|
388
393
|
# via pytest
|
|
@@ -394,7 +399,7 @@ tqdm==4.67.1
|
|
|
394
399
|
# pymatgen
|
|
395
400
|
typeguard==4.4.2
|
|
396
401
|
# via inflect
|
|
397
|
-
typing-extensions==4.
|
|
402
|
+
typing-extensions==4.13.0
|
|
398
403
|
# via
|
|
399
404
|
# emmet-core
|
|
400
405
|
# mp-api
|
|
@@ -402,8 +407,12 @@ typing-extensions==4.12.2
|
|
|
402
407
|
# pydantic-core
|
|
403
408
|
# pydash
|
|
404
409
|
# referencing
|
|
410
|
+
# spglib
|
|
405
411
|
# typeguard
|
|
406
|
-
|
|
412
|
+
# typing-inspection
|
|
413
|
+
typing-inspection==0.4.0
|
|
414
|
+
# via pydantic
|
|
415
|
+
tzdata==2025.2
|
|
407
416
|
# via pandas
|
|
408
417
|
uncertainties==3.2.2
|
|
409
418
|
# via pymatgen
|
|
@@ -411,8 +420,6 @@ urllib3==2.3.0
|
|
|
411
420
|
# via
|
|
412
421
|
# botocore
|
|
413
422
|
# requests
|
|
414
|
-
waterdynamics==1.2.0
|
|
415
|
-
# via mdanalysis
|
|
416
423
|
wrapt==1.17.2
|
|
417
424
|
# via smart-open
|
|
418
425
|
|