emmet-builders 0.84.2rc10__tar.gz → 0.84.3rc2__tar.gz
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- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/PKG-INFO +1 -1
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/vasp/materials.py +3 -1
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet_builders.egg-info/PKG-INFO +1 -1
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/ubuntu-latest_py3.10.txt +50 -18
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/ubuntu-latest_py3.10_extras.txt +64 -30
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/ubuntu-latest_py3.11.txt +49 -17
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/ubuntu-latest_py3.11_extras.txt +63 -29
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_elasticity.py +1 -1
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_utils.py +3 -1
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/MANIFEST.in +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/abinit/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/abinit/phonon.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/abinit/sound_velocity.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/feff/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/feff/xas.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/absorption_spectrum.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/alloys.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/basic_descriptors.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/bonds.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/chemenv.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/corrected_entries.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/dielectric.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/elasticity.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/electrodes.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/electronic_structure.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/magnetism.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/ml.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/optimade.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/oxidation_states.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/piezoelectric.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/provenance.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/robocrys.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/similarity.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/substrates.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/summary.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/materials/thermo.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/matscholar/missing_compositions.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/mobility/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/mobility/migration_graph.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/atomic.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/bonds.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/metal_binding.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/orbitals.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/redox.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/summary.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/thermo.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/molecules/vibration.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/qchem/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/qchem/molecules.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/settings.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/utils.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/vasp/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/vasp/mp_potcar_stats.json.gz +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet/builders/vasp/task_validator.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet_builders.egg-info/SOURCES.txt +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet_builders.egg-info/dependency_links.txt +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet_builders.egg-info/not-zip-safe +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet_builders.egg-info/requires.txt +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/emmet_builders.egg-info/top_level.txt +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/deployment.txt +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/setup.cfg +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/setup.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/conftest.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/__init__.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_atomic.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_bonds.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_metal_binding.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_orbitals.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_redox.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_summary.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_thermo.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/molecules/test_vibration.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_absorption.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_basic_descriptors.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_chemenv.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_corrected_entries_thermo.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_dielectric.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_electronic_structure.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_magnetism.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_materials.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_ml.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_mobility.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_oxidation.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_piezoelectric.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_qchem.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_similarity.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_summary.py +0 -0
- {emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/tests/test_vasp.py +0 -0
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@@ -238,9 +238,11 @@ class MaterialsBuilder(Builder):
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grouped_tasks = self.filter_and_group_tasks(tasks, task_transformations)
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materials = []
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for group in grouped_tasks:
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# commercial_license == True means that the default CC-BY license is applied
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# commercial_license == False means that a CC-BY-NC license is applied
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if set(task_doc.tags).intersection(
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if task_doc.tags and set(task_doc.tags).intersection(
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set(self.settings.NON_COMMERCIAL_TAGS)
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):
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commercial_license = False
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{emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/ubuntu-latest_py3.10.txt
RENAMED
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# via
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# via
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# matcalc
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# jsonlines
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# referencing
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# via paramiko
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# s3transfer
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# seaborn
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paramiko==3.5.0
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@@ -187,8 +206,10 @@ phonopy==2.28.0
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# via
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# imageio
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# matplotlib
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# rdkit
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# scikit-image
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plotly==5.24.1
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# via
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# pymatgen
|
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@@ -217,20 +238,24 @@ pydantic-settings==2.5.2
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# via maggma
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pymatgen==2024.
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pymatgen==2024.10.3
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# via
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# emmet-core
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# matcalc
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# matminer
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# mp-api
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# mp-pyrho
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# pymatgen-analysis-alloys
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# pymatgen-analysis-defects
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# via emmet-core
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pymongo==4.10.1
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@@ -269,7 +294,7 @@ requests==2.32.3
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# via
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@@ -284,6 +309,8 @@ ruamel-yaml-clib==0.2.8
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# via ruamel-yaml
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# via boto3
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scikit-image==0.24.0
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# via pymatgen-analysis-defects
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# via matminer
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scipy==1.14.1
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@@ -293,9 +320,12 @@ scipy==1.14.1
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# mdanalysis
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# robocrys
|
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# scikit-image
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# scikit-learn
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# solvation-analysis
|
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# statsmodels
|
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+
seaborn==0.13.2
|
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# via pymatgen-analysis-diffusion
|
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seekpath==2.1.0
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# via emmet-core
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sentinels==1.0.0
|
|
@@ -307,7 +337,7 @@ six==1.16.0
|
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# patsy
|
|
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# pybtex
|
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# python-dateutil
|
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smart-open==7.0.5
|
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# via mp-api
|
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|
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# via
|
|
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# seekpath
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# via maggma
|
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+
statsmodels==0.14.4
|
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# via solvation-analysis
|
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sympy==1.13.3
|
|
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# via
|
|
@@ -335,7 +365,9 @@ threadpoolctl==3.5.0
|
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# via
|
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# mdanalysis
|
|
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# scikit-learn
|
|
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|
-
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|
+
tifffile==2024.9.20
|
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# via scikit-image
|
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+
tomli==2.0.2
|
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# via pytest
|
|
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|
tqdm==4.66.5
|
|
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# via
|
|
@@ -353,7 +385,7 @@ typing-extensions==4.12.2
|
|
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|
# pydantic-core
|
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# pydash
|
|
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|
# typeguard
|
|
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|
-
tzdata==2024.
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|
+
tzdata==2024.2
|
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# via pandas
|
|
358
390
|
uncertainties==3.2.2
|
|
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|
# via pymatgen
|
{emmet-builders-0.84.2rc10 → emmet-builders-0.84.3rc2}/requirements/ubuntu-latest_py3.10_extras.txt
RENAMED
|
@@ -4,9 +4,9 @@
|
|
|
4
4
|
#
|
|
5
5
|
# pip-compile --all-extras --output-file=requirements/ubuntu-latest_py3.10_extras.txt
|
|
6
6
|
#
|
|
7
|
-
aiohappyeyeballs==2.4.
|
|
7
|
+
aiohappyeyeballs==2.4.3
|
|
8
8
|
# via aiohttp
|
|
9
|
-
aiohttp==3.10.
|
|
9
|
+
aiohttp==3.10.9
|
|
10
10
|
# via fsspec
|
|
11
11
|
aioitertools==0.12.0
|
|
12
12
|
# via maggma
|
|
@@ -19,6 +19,7 @@ ase==3.23.0
|
|
|
19
19
|
# chgnet
|
|
20
20
|
# matcalc
|
|
21
21
|
# matgl
|
|
22
|
+
# pymatgen-analysis-diffusion
|
|
22
23
|
async-timeout==4.0.3
|
|
23
24
|
# via aiohttp
|
|
24
25
|
attrs==24.2.0
|
|
@@ -29,13 +30,13 @@ attrs==24.2.0
|
|
|
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|
# referencing
|
|
30
31
|
bcrypt==4.2.0
|
|
31
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|
# via paramiko
|
|
32
|
-
boto3==1.35.
|
|
33
|
+
boto3==1.35.34
|
|
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34
|
# via maggma
|
|
34
|
-
botocore==1.35.
|
|
35
|
+
botocore==1.35.34
|
|
35
36
|
# via
|
|
36
37
|
# boto3
|
|
37
38
|
# s3transfer
|
|
38
|
-
bracex==2.5
|
|
39
|
+
bracex==2.5.post1
|
|
39
40
|
# via wcmatch
|
|
40
41
|
certifi==2024.8.30
|
|
41
42
|
# via requests
|
|
@@ -47,7 +48,7 @@ cfgv==3.4.0
|
|
|
47
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|
# via pre-commit
|
|
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49
|
charset-normalizer==3.3.2
|
|
49
50
|
# via requests
|
|
50
|
-
chgnet==0.
|
|
51
|
+
chgnet==0.4.0
|
|
51
52
|
# via emmet-core
|
|
52
53
|
click==8.1.7
|
|
53
54
|
# via
|
|
@@ -68,14 +69,16 @@ cycler==0.12.1
|
|
|
68
69
|
cython==3.0.11
|
|
69
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|
# via chgnet
|
|
70
71
|
dgl==2.1.0
|
|
71
|
-
# via
|
|
72
|
+
# via
|
|
73
|
+
# emmet-core
|
|
74
|
+
# matgl
|
|
72
75
|
distlib==0.3.8
|
|
73
76
|
# via virtualenv
|
|
74
|
-
dnspython==2.
|
|
77
|
+
dnspython==2.7.0
|
|
75
78
|
# via
|
|
76
79
|
# maggma
|
|
77
80
|
# pymongo
|
|
78
|
-
emmet-core[all,ml]==0.84.
|
|
81
|
+
emmet-core[all,ml]==0.84.2
|
|
79
82
|
# via
|
|
80
83
|
# emmet-builders (setup.py)
|
|
81
84
|
# mp-api
|
|
@@ -90,7 +93,7 @@ filelock==3.16.1
|
|
|
90
93
|
# virtualenv
|
|
91
94
|
flake8==7.1.1
|
|
92
95
|
# via emmet-builders (setup.py)
|
|
93
|
-
fonttools==4.
|
|
96
|
+
fonttools==4.54.1
|
|
94
97
|
# via matplotlib
|
|
95
98
|
frozenlist==1.4.1
|
|
96
99
|
# via
|
|
@@ -105,9 +108,9 @@ ghp-import==2.1.0
|
|
|
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108
|
# via mkdocs
|
|
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109
|
griddataformats==1.0.2
|
|
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110
|
# via mdanalysis
|
|
108
|
-
griffe==1.3.
|
|
111
|
+
griffe==1.3.2
|
|
109
112
|
# via mkdocstrings-python
|
|
110
|
-
h5py==3.
|
|
113
|
+
h5py==3.12.1
|
|
111
114
|
# via phonopy
|
|
112
115
|
htmlmin2==0.1.13
|
|
113
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|
# via mkdocs-minify-plugin
|
|
@@ -117,6 +120,8 @@ idna==3.10
|
|
|
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|
# via
|
|
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|
# requests
|
|
119
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|
# yarl
|
|
123
|
+
imageio==2.35.1
|
|
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|
+
# via scikit-image
|
|
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|
inflect==7.4.0
|
|
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|
# via robocrys
|
|
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|
iniconfig==2.0.0
|
|
@@ -151,6 +156,8 @@ kiwisolver==1.4.7
|
|
|
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|
# via matplotlib
|
|
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|
latexcodec==3.0.0
|
|
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|
# via pybtex
|
|
159
|
+
lazy-loader==0.4
|
|
160
|
+
# via scikit-image
|
|
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161
|
lightning==2.4.0
|
|
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|
# via matgl
|
|
156
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|
lightning-utilities==0.11.7
|
|
@@ -160,7 +167,7 @@ lightning-utilities==0.11.7
|
|
|
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|
# torchmetrics
|
|
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|
livereload==2.7.0
|
|
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169
|
# via emmet-builders (setup.py)
|
|
163
|
-
maggma==0.69.
|
|
170
|
+
maggma==0.69.4
|
|
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171
|
# via
|
|
165
172
|
# emmet-builders (setup.py)
|
|
166
173
|
# mp-api
|
|
@@ -181,7 +188,7 @@ matcalc==0.0.4
|
|
|
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|
# via emmet-core
|
|
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189
|
matgl==1.1.3
|
|
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|
# via emmet-core
|
|
184
|
-
matminer==0.9.
|
|
191
|
+
matminer==0.9.3
|
|
185
192
|
# via
|
|
186
193
|
# emmet-builders (setup.py)
|
|
187
194
|
# robocrys
|
|
@@ -191,6 +198,7 @@ matplotlib==3.9.2
|
|
|
191
198
|
# mdanalysis
|
|
192
199
|
# phonopy
|
|
193
200
|
# pymatgen
|
|
201
|
+
# seaborn
|
|
194
202
|
# solvation-analysis
|
|
195
203
|
mccabe==0.7.0
|
|
196
204
|
# via flake8
|
|
@@ -255,6 +263,8 @@ more-itertools==10.5.0
|
|
|
255
263
|
# via inflect
|
|
256
264
|
mp-api==0.42.2
|
|
257
265
|
# via robocrys
|
|
266
|
+
mp-pyrho==0.4.4
|
|
267
|
+
# via pymatgen-analysis-defects
|
|
258
268
|
mpmath==1.3.0
|
|
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269
|
# via sympy
|
|
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270
|
mrcfile==1.5.3
|
|
@@ -281,6 +291,7 @@ networkx==3.3
|
|
|
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|
# dgl
|
|
282
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|
# pymatgen
|
|
283
293
|
# robocrys
|
|
294
|
+
# scikit-image
|
|
284
295
|
# torch
|
|
285
296
|
nodeenv==1.9.1
|
|
286
297
|
# via pre-commit
|
|
@@ -293,6 +304,7 @@ numpy==1.26.4
|
|
|
293
304
|
# emmet-core
|
|
294
305
|
# griddataformats
|
|
295
306
|
# h5py
|
|
307
|
+
# imageio
|
|
296
308
|
# maggma
|
|
297
309
|
# matminer
|
|
298
310
|
# matplotlib
|
|
@@ -302,16 +314,21 @@ numpy==1.26.4
|
|
|
302
314
|
# patsy
|
|
303
315
|
# phonopy
|
|
304
316
|
# pymatgen
|
|
317
|
+
# pymatgen-analysis-defects
|
|
318
|
+
# pymatgen-analysis-diffusion
|
|
305
319
|
# rdkit
|
|
306
320
|
# robocrys
|
|
321
|
+
# scikit-image
|
|
307
322
|
# scikit-learn
|
|
308
323
|
# scipy
|
|
324
|
+
# seaborn
|
|
309
325
|
# seekpath
|
|
310
326
|
# shapely
|
|
311
327
|
# solvation-analysis
|
|
312
328
|
# spglib
|
|
313
329
|
# statsmodels
|
|
314
330
|
# tidynamics
|
|
331
|
+
# tifffile
|
|
315
332
|
# torchmetrics
|
|
316
333
|
nvidia-cublas-cu12==12.1.3.1
|
|
317
334
|
# via
|
|
@@ -340,7 +357,7 @@ nvidia-ml-py3==7.352.0
|
|
|
340
357
|
# via chgnet
|
|
341
358
|
nvidia-nccl-cu12==2.20.5
|
|
342
359
|
# via torch
|
|
343
|
-
nvidia-nvjitlink-cu12==12.6.
|
|
360
|
+
nvidia-nvjitlink-cu12==12.6.77
|
|
344
361
|
# via
|
|
345
362
|
# nvidia-cusolver-cu12
|
|
346
363
|
# nvidia-cusparse-cu12
|
|
@@ -350,6 +367,7 @@ orjson==3.10.7
|
|
|
350
367
|
# via maggma
|
|
351
368
|
packaging==24.1
|
|
352
369
|
# via
|
|
370
|
+
# lazy-loader
|
|
353
371
|
# lightning
|
|
354
372
|
# lightning-utilities
|
|
355
373
|
# matplotlib
|
|
@@ -359,15 +377,17 @@ packaging==24.1
|
|
|
359
377
|
# plotly
|
|
360
378
|
# pytest
|
|
361
379
|
# pytorch-lightning
|
|
380
|
+
# scikit-image
|
|
362
381
|
# statsmodels
|
|
363
382
|
# torchmetrics
|
|
364
383
|
palettable==3.3.3
|
|
365
384
|
# via pymatgen
|
|
366
|
-
pandas==2.2.
|
|
385
|
+
pandas==2.2.3
|
|
367
386
|
# via
|
|
368
387
|
# maggma
|
|
369
388
|
# matminer
|
|
370
389
|
# pymatgen
|
|
390
|
+
# seaborn
|
|
371
391
|
# solvation-analysis
|
|
372
392
|
# statsmodels
|
|
373
393
|
paramiko==3.5.0
|
|
@@ -380,8 +400,10 @@ phonopy==2.28.0
|
|
|
380
400
|
# via matcalc
|
|
381
401
|
pillow==10.4.0
|
|
382
402
|
# via
|
|
403
|
+
# imageio
|
|
383
404
|
# matplotlib
|
|
384
405
|
# rdkit
|
|
406
|
+
# scikit-image
|
|
385
407
|
platformdirs==4.3.6
|
|
386
408
|
# via
|
|
387
409
|
# mkdocs-get-deps
|
|
@@ -393,7 +415,7 @@ plotly==5.24.1
|
|
|
393
415
|
# solvation-analysis
|
|
394
416
|
pluggy==1.5.0
|
|
395
417
|
# via pytest
|
|
396
|
-
pre-commit==
|
|
418
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+
pre-commit==4.0.0
|
|
397
419
|
# via emmet-builders (setup.py)
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398
420
|
psutil==6.0.0
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399
421
|
# via dgl
|
|
@@ -430,7 +452,7 @@ pyflakes==3.2.0
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430
452
|
# via flake8
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431
453
|
pygments==2.18.0
|
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432
454
|
# via mkdocs-material
|
|
433
|
-
pymatgen==2024.
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455
|
+
pymatgen==2024.10.3
|
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434
456
|
# via
|
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435
457
|
# chgnet
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436
458
|
# emmet-core
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@@ -438,18 +460,22 @@ pymatgen==2024.4.13
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438
460
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# matgl
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439
461
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# matminer
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440
462
|
# mp-api
|
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463
|
+
# mp-pyrho
|
|
441
464
|
# pymatgen-analysis-alloys
|
|
465
|
+
# pymatgen-analysis-defects
|
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442
466
|
# pymatgen-analysis-diffusion
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443
467
|
# robocrys
|
|
444
468
|
pymatgen-analysis-alloys==0.0.6
|
|
445
469
|
# via emmet-core
|
|
446
|
-
pymatgen-analysis-
|
|
470
|
+
pymatgen-analysis-defects==2024.7.19
|
|
447
471
|
# via emmet-core
|
|
448
|
-
|
|
472
|
+
pymatgen-analysis-diffusion==2024.7.15
|
|
473
|
+
# via emmet-core
|
|
474
|
+
pymdown-extensions==10.11.2
|
|
449
475
|
# via
|
|
450
476
|
# mkdocs-material
|
|
451
477
|
# mkdocstrings
|
|
452
|
-
pymongo==4.
|
|
478
|
+
pymongo==4.10.1
|
|
453
479
|
# via
|
|
454
480
|
# maggma
|
|
455
481
|
# matminer
|
|
@@ -508,7 +534,7 @@ requests==2.32.3
|
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|
508
534
|
# mp-api
|
|
509
535
|
# pymatgen
|
|
510
536
|
# torchdata
|
|
511
|
-
robocrys==0.2.
|
|
537
|
+
robocrys==0.2.10
|
|
512
538
|
# via emmet-core
|
|
513
539
|
rpds-py==0.20.0
|
|
514
540
|
# via
|
|
@@ -523,6 +549,8 @@ ruamel-yaml-clib==0.2.8
|
|
|
523
549
|
# via ruamel-yaml
|
|
524
550
|
s3transfer==0.10.2
|
|
525
551
|
# via boto3
|
|
552
|
+
scikit-image==0.24.0
|
|
553
|
+
# via pymatgen-analysis-defects
|
|
526
554
|
scikit-learn==1.5.2
|
|
527
555
|
# via matminer
|
|
528
556
|
scipy==1.14.1
|
|
@@ -533,9 +561,12 @@ scipy==1.14.1
|
|
|
533
561
|
# mdanalysis
|
|
534
562
|
# pymatgen
|
|
535
563
|
# robocrys
|
|
564
|
+
# scikit-image
|
|
536
565
|
# scikit-learn
|
|
537
566
|
# solvation-analysis
|
|
538
567
|
# statsmodels
|
|
568
|
+
seaborn==0.13.2
|
|
569
|
+
# via pymatgen-analysis-diffusion
|
|
539
570
|
seekpath==2.1.0
|
|
540
571
|
# via emmet-core
|
|
541
572
|
sentinels==1.0.0
|
|
@@ -547,7 +578,7 @@ six==1.16.0
|
|
|
547
578
|
# patsy
|
|
548
579
|
# pybtex
|
|
549
580
|
# python-dateutil
|
|
550
|
-
smart-open==7.0.
|
|
581
|
+
smart-open==7.0.5
|
|
551
582
|
# via mp-api
|
|
552
583
|
snowballstemmer==2.2.0
|
|
553
584
|
# via pydocstyle
|
|
@@ -563,7 +594,7 @@ spglib==2.5.0
|
|
|
563
594
|
# seekpath
|
|
564
595
|
sshtunnel==0.4.0
|
|
565
596
|
# via maggma
|
|
566
|
-
statsmodels==0.14.
|
|
597
|
+
statsmodels==0.14.4
|
|
567
598
|
# via solvation-analysis
|
|
568
599
|
sympy==1.13.3
|
|
569
600
|
# via
|
|
@@ -580,7 +611,9 @@ threadpoolctl==3.5.0
|
|
|
580
611
|
# scikit-learn
|
|
581
612
|
tidynamics==1.1.2
|
|
582
613
|
# via transport-analysis
|
|
583
|
-
|
|
614
|
+
tifffile==2024.9.20
|
|
615
|
+
# via scikit-image
|
|
616
|
+
tomli==2.0.2
|
|
584
617
|
# via
|
|
585
618
|
# coverage
|
|
586
619
|
# mypy
|
|
@@ -624,6 +657,7 @@ types-setuptools==75.1.0.20240917
|
|
|
624
657
|
# via emmet-builders (setup.py)
|
|
625
658
|
typing-extensions==4.12.2
|
|
626
659
|
# via
|
|
660
|
+
# chgnet
|
|
627
661
|
# emmet-core
|
|
628
662
|
# lightning
|
|
629
663
|
# lightning-utilities
|
|
@@ -636,7 +670,7 @@ typing-extensions==4.12.2
|
|
|
636
670
|
# pytorch-lightning
|
|
637
671
|
# torch
|
|
638
672
|
# typeguard
|
|
639
|
-
tzdata==2024.
|
|
673
|
+
tzdata==2024.2
|
|
640
674
|
# via pandas
|
|
641
675
|
uncertainties==3.2.2
|
|
642
676
|
# via pymatgen
|
|
@@ -646,17 +680,17 @@ urllib3==2.2.3
|
|
|
646
680
|
# requests
|
|
647
681
|
# torchdata
|
|
648
682
|
# types-requests
|
|
649
|
-
virtualenv==20.26.
|
|
683
|
+
virtualenv==20.26.6
|
|
650
684
|
# via pre-commit
|
|
651
|
-
watchdog==5.0.
|
|
685
|
+
watchdog==5.0.3
|
|
652
686
|
# via mkdocs
|
|
653
|
-
wcmatch==
|
|
687
|
+
wcmatch==10.0
|
|
654
688
|
# via mkdocs-awesome-pages-plugin
|
|
655
689
|
wincertstore==0.2.1
|
|
656
690
|
# via emmet-builders (setup.py)
|
|
657
691
|
wrapt==1.16.0
|
|
658
692
|
# via smart-open
|
|
659
|
-
yarl==1.
|
|
693
|
+
yarl==1.13.1
|
|
660
694
|
# via aiohttp
|
|
661
695
|
|
|
662
696
|
# The following packages are considered to be unsafe in a requirements file:
|