emmet-builders 0.83.8__tar.gz → 0.83.9__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of emmet-builders might be problematic. Click here for more details.

Files changed (94) hide show
  1. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/PKG-INFO +1 -1
  2. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet_builders.egg-info/PKG-INFO +1 -1
  3. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet_builders.egg-info/requires.txt +2 -0
  4. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/ubuntu-latest_py3.10.txt +92 -149
  5. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/ubuntu-latest_py3.10_extras.txt +103 -43
  6. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/ubuntu-latest_py3.11.txt +87 -146
  7. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/ubuntu-latest_py3.11_extras.txt +103 -43
  8. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/ubuntu-latest_py3.9.txt +93 -150
  9. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/ubuntu-latest_py3.9_extras.txt +103 -43
  10. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/setup.py +2 -0
  11. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/MANIFEST.in +0 -0
  12. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/__init__.py +0 -0
  13. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/abinit/__init__.py +0 -0
  14. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/abinit/phonon.py +0 -0
  15. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/abinit/sound_velocity.py +0 -0
  16. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/feff/__init__.py +0 -0
  17. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/feff/xas.py +0 -0
  18. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/__init__.py +0 -0
  19. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/absorption_spectrum.py +0 -0
  20. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/alloys.py +0 -0
  21. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/basic_descriptors.py +0 -0
  22. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/bonds.py +0 -0
  23. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/chemenv.py +0 -0
  24. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/corrected_entries.py +0 -0
  25. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/dielectric.py +0 -0
  26. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/elasticity.py +0 -0
  27. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/electrodes.py +0 -0
  28. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/electronic_structure.py +0 -0
  29. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/magnetism.py +0 -0
  30. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/ml.py +0 -0
  31. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/optimade.py +0 -0
  32. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/oxidation_states.py +0 -0
  33. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/piezoelectric.py +0 -0
  34. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/provenance.py +0 -0
  35. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/robocrys.py +0 -0
  36. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/similarity.py +0 -0
  37. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/substrates.py +0 -0
  38. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/summary.py +0 -0
  39. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/materials/thermo.py +0 -0
  40. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/matscholar/missing_compositions.py +0 -0
  41. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/mobility/__init__.py +0 -0
  42. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/mobility/migration_graph.py +0 -0
  43. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/__init__.py +0 -0
  44. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/atomic.py +0 -0
  45. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/bonds.py +0 -0
  46. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/metal_binding.py +0 -0
  47. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/orbitals.py +0 -0
  48. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/redox.py +0 -0
  49. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/summary.py +0 -0
  50. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/thermo.py +0 -0
  51. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/molecules/vibration.py +0 -0
  52. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/qchem/__init__.py +0 -0
  53. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/qchem/molecules.py +0 -0
  54. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/settings.py +0 -0
  55. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/utils.py +0 -0
  56. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/vasp/__init__.py +0 -0
  57. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/vasp/materials.py +0 -0
  58. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/vasp/mp_potcar_stats.json.gz +0 -0
  59. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet/builders/vasp/task_validator.py +0 -0
  60. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet_builders.egg-info/SOURCES.txt +0 -0
  61. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet_builders.egg-info/dependency_links.txt +0 -0
  62. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet_builders.egg-info/not-zip-safe +0 -0
  63. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/emmet_builders.egg-info/top_level.txt +0 -0
  64. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/requirements/deployment.txt +0 -0
  65. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/setup.cfg +0 -0
  66. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/__init__.py +0 -0
  67. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/conftest.py +0 -0
  68. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/__init__.py +0 -0
  69. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_atomic.py +0 -0
  70. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_bonds.py +0 -0
  71. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_metal_binding.py +0 -0
  72. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_orbitals.py +0 -0
  73. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_redox.py +0 -0
  74. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_summary.py +0 -0
  75. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_thermo.py +0 -0
  76. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/molecules/test_vibration.py +0 -0
  77. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_absorption.py +0 -0
  78. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_basic_descriptors.py +0 -0
  79. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_chemenv.py +0 -0
  80. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_corrected_entries_thermo.py +0 -0
  81. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_dielectric.py +0 -0
  82. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_elasticity.py +0 -0
  83. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_electronic_structure.py +0 -0
  84. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_magnetism.py +0 -0
  85. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_materials.py +0 -0
  86. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_ml.py +0 -0
  87. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_mobility.py +0 -0
  88. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_oxidation.py +0 -0
  89. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_piezoelectric.py +0 -0
  90. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_qchem.py +0 -0
  91. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_similarity.py +0 -0
  92. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_summary.py +0 -0
  93. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_utils.py +0 -0
  94. {emmet-builders-0.83.8 → emmet-builders-0.83.9}/tests/test_vasp.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: emmet-builders
3
- Version: 0.83.8
3
+ Version: 0.83.9
4
4
  Summary: Builders for the Emmet Library
5
5
  Home-page: https://github.com/materialsproject/emmet
6
6
  Author: The Materials Project
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: emmet-builders
3
- Version: 0.83.8
3
+ Version: 0.83.9
4
4
  Summary: Builders for the Emmet Library
5
5
  Home-page: https://github.com/materialsproject/emmet
6
6
  Author: The Materials Project
@@ -1,6 +1,8 @@
1
1
  emmet-core[all]
2
2
  maggma>=0.57.6
3
3
  matminer>=0.9.1
4
+ solvation-analysis>=0.4.0
5
+ MDAnalysis>=2.7.0
4
6
 
5
7
  [docs]
6
8
  mkdocs
@@ -4,42 +4,32 @@
4
4
  #
5
5
  # pip-compile --output-file=requirements/ubuntu-latest_py3.10.txt
6
6
  #
7
- aiohttp==3.9.5
8
- # via fsspec
9
7
  aioitertools==0.11.0
10
8
  # via maggma
11
- aiosignal==1.3.1
12
- # via aiohttp
13
9
  annotated-types==0.7.0
14
10
  # via pydantic
15
- anyio==4.3.0
11
+ anyio==4.4.0
16
12
  # via
17
13
  # httpx
18
14
  # starlette
19
15
  # watchfiles
20
- ase==3.22.1
21
- # via
22
- # chgnet
23
- # matcalc
24
- # matgl
25
- async-timeout==4.0.3
26
- # via aiohttp
16
+ ase==3.23.0
17
+ # via matcalc
27
18
  attrs==23.2.0
28
19
  # via
29
- # aiohttp
30
20
  # jsonschema
31
21
  # referencing
32
22
  bcrypt==4.1.3
33
23
  # via paramiko
34
24
  blinker==1.8.2
35
25
  # via flask
36
- boto3==1.34.112
26
+ boto3==1.34.124
37
27
  # via maggma
38
- botocore==1.34.112
28
+ botocore==1.34.124
39
29
  # via
40
30
  # boto3
41
31
  # s3transfer
42
- certifi==2024.2.2
32
+ certifi==2024.6.2
43
33
  # via
44
34
  # httpcore
45
35
  # httpx
@@ -50,8 +40,6 @@ cffi==1.16.0
50
40
  # pynacl
51
41
  charset-normalizer==3.3.2
52
42
  # via requests
53
- chgnet==0.3.5
54
- # via emmet-core
55
43
  click==8.1.7
56
44
  # via
57
45
  # flask
@@ -60,14 +48,10 @@ click==8.1.7
60
48
  # uvicorn
61
49
  contourpy==1.2.1
62
50
  # via matplotlib
63
- cryptography==42.0.7
51
+ cryptography==42.0.8
64
52
  # via paramiko
65
53
  cycler==0.12.1
66
54
  # via matplotlib
67
- cython==3.0.10
68
- # via chgnet
69
- dgl==2.1.0
70
- # via matgl
71
55
  dnspython==2.6.1
72
56
  # via
73
57
  # email-validator
@@ -75,34 +59,26 @@ dnspython==2.6.1
75
59
  # pymongo
76
60
  email-validator==2.1.1
77
61
  # via fastapi
78
- emmet-core[all,ml]==0.83.6
62
+ emmet-core[all]==0.83.8
79
63
  # via
80
64
  # emmet-builders (setup.py)
81
65
  # mp-api
82
66
  exceptiongroup==1.2.1
83
- # via anyio
67
+ # via
68
+ # anyio
69
+ # pytest
84
70
  fastapi==0.111.0
85
71
  # via maggma
86
72
  fastapi-cli==0.0.4
87
73
  # via fastapi
88
- filelock==3.14.0
89
- # via
90
- # torch
91
- # triton
74
+ fasteners==0.19
75
+ # via mdanalysis
92
76
  flask==3.0.3
93
77
  # via mongogrant
94
- fonttools==4.51.0
78
+ fonttools==4.53.0
95
79
  # via matplotlib
96
- frozenlist==1.4.1
97
- # via
98
- # aiohttp
99
- # aiosignal
100
- fsspec[http]==2024.5.0
101
- # via
102
- # pytorch-lightning
103
- # torch
104
- future==1.0.0
105
- # via uncertainties
80
+ griddataformats==1.0.2
81
+ # via mdanalysis
106
82
  h11==0.14.0
107
83
  # via
108
84
  # httpcore
@@ -121,16 +97,16 @@ idna==3.7
121
97
  # email-validator
122
98
  # httpx
123
99
  # requests
124
- # yarl
125
100
  inflect==7.2.1
126
101
  # via robocrys
102
+ iniconfig==2.0.0
103
+ # via pytest
127
104
  itsdangerous==2.2.0
128
105
  # via flask
129
106
  jinja2==3.1.4
130
107
  # via
131
108
  # fastapi
132
109
  # flask
133
- # torch
134
110
  jmespath==1.0.1
135
111
  # via
136
112
  # boto3
@@ -138,6 +114,7 @@ jmespath==1.0.1
138
114
  joblib==1.4.2
139
115
  # via
140
116
  # matcalc
117
+ # mdanalysis
141
118
  # pymatgen
142
119
  # pymatgen-analysis-diffusion
143
120
  # scikit-learn
@@ -149,11 +126,7 @@ kiwisolver==1.4.5
149
126
  # via matplotlib
150
127
  latexcodec==3.0.0
151
128
  # via pybtex
152
- lightning-utilities==0.11.2
153
- # via
154
- # pytorch-lightning
155
- # torchmetrics
156
- maggma==0.67.0
129
+ maggma==0.68.4
157
130
  # via
158
131
  # emmet-builders (setup.py)
159
132
  # mp-api
@@ -165,8 +138,6 @@ markupsafe==2.1.5
165
138
  # werkzeug
166
139
  matcalc==0.0.4
167
140
  # via emmet-core
168
- matgl==1.1.1
169
- # via emmet-core
170
141
  matminer==0.9.2
171
142
  # via
172
143
  # emmet-builders (setup.py)
@@ -174,15 +145,25 @@ matminer==0.9.2
174
145
  matplotlib==3.9.0
175
146
  # via
176
147
  # ase
148
+ # mdanalysis
177
149
  # phonopy
178
150
  # pymatgen
151
+ # solvation-analysis
152
+ mda-xdrlib==0.2.0
153
+ # via mdanalysis
154
+ mdanalysis==2.7.0
155
+ # via
156
+ # emmet-builders (setup.py)
157
+ # solvation-analysis
179
158
  mdurl==0.1.2
180
159
  # via markdown-it-py
160
+ mmtf-python==1.1.3
161
+ # via mdanalysis
181
162
  mongogrant==0.3.3
182
163
  # via maggma
183
164
  mongomock==4.1.2
184
165
  # via maggma
185
- monty==2024.5.15
166
+ monty==2024.5.24
186
167
  # via
187
168
  # emmet-core
188
169
  # maggma
@@ -190,108 +171,83 @@ monty==2024.5.15
190
171
  # mp-api
191
172
  # pymatgen
192
173
  # robocrys
193
- more-itertools==10.2.0
174
+ more-itertools==10.3.0
194
175
  # via inflect
195
176
  mp-api==0.41.2
196
177
  # via robocrys
197
178
  mpmath==1.3.0
198
179
  # via sympy
180
+ mrcfile==1.5.0
181
+ # via griddataformats
199
182
  msgpack==1.0.8
200
183
  # via
201
184
  # maggma
185
+ # mmtf-python
202
186
  # mp-api
203
- multidict==6.0.5
204
- # via
205
- # aiohttp
206
- # yarl
207
187
  networkx==3.3
208
188
  # via
209
- # dgl
210
189
  # pymatgen
211
190
  # robocrys
212
- # torch
213
191
  numpy==1.26.4
214
192
  # via
215
193
  # ase
216
- # chgnet
217
194
  # contourpy
218
- # dgl
195
+ # griddataformats
219
196
  # h5py
220
197
  # maggma
221
198
  # matminer
222
199
  # matplotlib
200
+ # mdanalysis
201
+ # mrcfile
223
202
  # pandas
203
+ # patsy
224
204
  # phonopy
225
205
  # pymatgen
226
- # pytorch-lightning
206
+ # rdkit
227
207
  # robocrys
228
208
  # scikit-learn
229
209
  # scipy
230
210
  # seekpath
231
211
  # shapely
212
+ # solvation-analysis
232
213
  # spglib
233
- # torchmetrics
234
- nvidia-cublas-cu12==12.1.3.1
235
- # via
236
- # nvidia-cudnn-cu12
237
- # nvidia-cusolver-cu12
238
- # torch
239
- nvidia-cuda-cupti-cu12==12.1.105
240
- # via torch
241
- nvidia-cuda-nvrtc-cu12==12.1.105
242
- # via torch
243
- nvidia-cuda-runtime-cu12==12.1.105
244
- # via torch
245
- nvidia-cudnn-cu12==8.9.2.26
246
- # via torch
247
- nvidia-cufft-cu12==11.0.2.54
248
- # via torch
249
- nvidia-curand-cu12==10.3.2.106
250
- # via torch
251
- nvidia-cusolver-cu12==11.4.5.107
252
- # via torch
253
- nvidia-cusparse-cu12==12.1.0.106
254
- # via
255
- # nvidia-cusolver-cu12
256
- # torch
257
- nvidia-ml-py3==7.352.0
258
- # via chgnet
259
- nvidia-nccl-cu12==2.19.3
260
- # via torch
261
- nvidia-nvjitlink-cu12==12.5.40
262
- # via
263
- # nvidia-cusolver-cu12
264
- # nvidia-cusparse-cu12
265
- nvidia-nvtx-cu12==12.1.105
266
- # via torch
267
- orjson==3.10.3
214
+ # statsmodels
215
+ orjson==3.10.4
268
216
  # via
269
217
  # fastapi
270
218
  # maggma
271
- packaging==24.0
219
+ packaging==24.1
272
220
  # via
273
- # lightning-utilities
274
221
  # matplotlib
222
+ # mdanalysis
275
223
  # mongomock
276
224
  # plotly
277
- # pytorch-lightning
278
- # torchmetrics
225
+ # pytest
226
+ # statsmodels
279
227
  palettable==3.3.3
280
228
  # via pymatgen
281
229
  pandas==2.2.2
282
230
  # via
283
231
  # matminer
284
232
  # pymatgen
233
+ # solvation-analysis
234
+ # statsmodels
285
235
  paramiko==3.4.0
286
236
  # via sshtunnel
287
- phonopy==2.23.1
237
+ patsy==0.5.6
238
+ # via statsmodels
239
+ phonopy==2.24.2
288
240
  # via matcalc
289
241
  pillow==10.3.0
290
- # via matplotlib
242
+ # via
243
+ # matplotlib
244
+ # rdkit
291
245
  plotly==5.22.0
292
- # via pymatgen
293
- psutil==5.9.8
294
- # via dgl
246
+ # via
247
+ # pymatgen
248
+ # solvation-analysis
249
+ pluggy==1.5.0
250
+ # via pytest
295
251
  pubchempy==1.0.4
296
252
  # via robocrys
297
253
  pybtex==0.24.0
@@ -301,16 +257,15 @@ pybtex==0.24.0
301
257
  # robocrys
302
258
  pycparser==2.22
303
259
  # via cffi
304
- pydantic==2.7.1
260
+ pydantic==2.7.3
305
261
  # via
306
262
  # emmet-core
307
263
  # fastapi
308
264
  # maggma
309
- # matgl
310
265
  # pydantic-settings
311
- pydantic-core==2.18.2
266
+ pydantic-core==2.18.4
312
267
  # via pydantic
313
- pydantic-settings==2.2.1
268
+ pydantic-settings==2.3.2
314
269
  # via
315
270
  # emmet-core
316
271
  # maggma
@@ -318,12 +273,10 @@ pydash==8.0.1
318
273
  # via maggma
319
274
  pygments==2.18.0
320
275
  # via rich
321
- pymatgen==2024.5.1
276
+ pymatgen==2024.4.13
322
277
  # via
323
- # chgnet
324
278
  # emmet-core
325
279
  # matcalc
326
- # matgl
327
280
  # matminer
328
281
  # mp-api
329
282
  # pymatgen-analysis-alloys
@@ -333,7 +286,7 @@ pymatgen-analysis-alloys==0.0.6
333
286
  # via emmet-core
334
287
  pymatgen-analysis-diffusion==2023.8.15
335
288
  # via emmet-core
336
- pymongo==4.7.2
289
+ pymongo==4.7.3
337
290
  # via
338
291
  # maggma
339
292
  # matminer
@@ -342,6 +295,8 @@ pynacl==1.5.0
342
295
  # via paramiko
343
296
  pyparsing==3.1.2
344
297
  # via matplotlib
298
+ pytest==8.2.2
299
+ # via solvation-analysis
345
300
  python-dateutil==2.9.0.post0
346
301
  # via
347
302
  # botocore
@@ -354,30 +309,27 @@ python-dotenv==1.0.1
354
309
  # uvicorn
355
310
  python-multipart==0.0.9
356
311
  # via fastapi
357
- pytorch-lightning==2.2.5
358
- # via matgl
359
312
  pytz==2024.1
360
313
  # via pandas
361
314
  pyyaml==6.0.1
362
315
  # via
363
316
  # phonopy
364
317
  # pybtex
365
- # pytorch-lightning
366
318
  # uvicorn
367
319
  pyzmq==26.0.3
368
320
  # via maggma
321
+ rdkit==2023.9.6
322
+ # via solvation-analysis
369
323
  referencing==0.35.1
370
324
  # via
371
325
  # jsonschema
372
326
  # jsonschema-specifications
373
- requests==2.32.2
327
+ requests==2.32.3
374
328
  # via
375
- # dgl
376
329
  # matminer
377
330
  # mongogrant
378
331
  # mp-api
379
332
  # pymatgen
380
- # torchdata
381
333
  rich==13.7.1
382
334
  # via typer
383
335
  robocrys==0.2.9
@@ -397,13 +349,16 @@ s3transfer==0.10.1
397
349
  # via boto3
398
350
  scikit-learn==1.5.0
399
351
  # via matminer
400
- scipy==1.13.1
352
+ scipy==1.12.0
401
353
  # via
402
354
  # ase
403
- # dgl
355
+ # griddataformats
356
+ # mdanalysis
404
357
  # pymatgen
405
358
  # robocrys
406
359
  # scikit-learn
360
+ # solvation-analysis
361
+ # statsmodels
407
362
  seekpath==2.1.0
408
363
  # via emmet-core
409
364
  sentinels==1.0.0
@@ -414,6 +369,7 @@ shellingham==1.5.4
414
369
  # via typer
415
370
  six==1.16.0
416
371
  # via
372
+ # patsy
417
373
  # pybtex
418
374
  # python-dateutil
419
375
  smart-open==7.0.4
@@ -422,6 +378,8 @@ sniffio==1.3.1
422
378
  # via
423
379
  # anyio
424
380
  # httpx
381
+ solvation-analysis==0.4.0
382
+ # via emmet-builders (setup.py)
425
383
  spglib==2.4.0
426
384
  # via
427
385
  # phonopy
@@ -432,54 +390,42 @@ sshtunnel==0.4.0
432
390
  # via maggma
433
391
  starlette==0.37.2
434
392
  # via fastapi
435
- sympy==1.12
393
+ statsmodels==0.14.2
394
+ # via solvation-analysis
395
+ sympy==1.12.1
436
396
  # via
437
397
  # matminer
438
398
  # pymatgen
439
- # torch
440
399
  tabulate==0.9.0
441
400
  # via pymatgen
442
401
  tenacity==8.3.0
443
402
  # via plotly
444
403
  threadpoolctl==3.5.0
445
- # via scikit-learn
446
- torch==2.2.1
447
- # via
448
- # chgnet
449
- # matgl
450
- # pytorch-lightning
451
- # torchdata
452
- # torchmetrics
453
- torchdata==0.7.1
454
- # via dgl
455
- torchmetrics==1.4.0.post0
456
- # via pytorch-lightning
404
+ # via
405
+ # mdanalysis
406
+ # scikit-learn
407
+ tomli==2.0.1
408
+ # via pytest
457
409
  tqdm==4.66.4
458
410
  # via
459
- # dgl
460
411
  # maggma
461
412
  # matminer
413
+ # mdanalysis
462
414
  # pymatgen
463
- # pytorch-lightning
464
- triton==2.2.0
465
- # via torch
466
- typeguard==4.2.1
415
+ typeguard==4.3.0
467
416
  # via inflect
468
417
  typer==0.12.3
469
418
  # via fastapi-cli
470
- typing-extensions==4.11.0
419
+ typing-extensions==4.12.2
471
420
  # via
472
421
  # anyio
473
422
  # emmet-core
474
423
  # fastapi
475
424
  # inflect
476
- # lightning-utilities
477
425
  # mp-api
478
426
  # pydantic
479
427
  # pydantic-core
480
428
  # pydash
481
- # pytorch-lightning
482
- # torch
483
429
  # typeguard
484
430
  # typer
485
431
  # uvicorn
@@ -487,20 +433,19 @@ tzdata==2024.1
487
433
  # via pandas
488
434
  ujson==5.10.0
489
435
  # via fastapi
490
- uncertainties==3.1.7
436
+ uncertainties==3.2.1
491
437
  # via pymatgen
492
438
  urllib3==2.2.1
493
439
  # via
494
440
  # botocore
495
441
  # requests
496
- # torchdata
497
- uvicorn[standard]==0.29.0
442
+ uvicorn[standard]==0.30.1
498
443
  # via
499
444
  # fastapi
500
445
  # maggma
501
446
  uvloop==0.19.0
502
447
  # via uvicorn
503
- watchfiles==0.21.0
448
+ watchfiles==0.22.0
504
449
  # via uvicorn
505
450
  websockets==12.0
506
451
  # via uvicorn
@@ -508,8 +453,6 @@ werkzeug==3.0.3
508
453
  # via flask
509
454
  wrapt==1.16.0
510
455
  # via smart-open
511
- yarl==1.9.4
512
- # via aiohttp
513
456
 
514
457
  # The following packages are considered to be unsafe in a requirements file:
515
458
  # setuptools