emantis 1.2.0__tar.gz → 1.2.2__tar.gz

{emantis-1.2.0 → emantis-1.2.2}/PKG-INFO

@@ -1,7 +1,7 @@
 Metadata-Version: 2.1
 Name: emantis
-Version: 1.2.0
-Summary: A cosmological emulator for non-linear large-scale structure formation studies in alternative dark energy and gravity theories.
+Version: 1.2.2
+Summary: A cosmological emulator for nonlinear large-scale structure formation studies in alternative dark energy and gravity theories.
 Keywords: cosmology,emulator,large-scale structure,dark energy,modified gravity
 Author-Email: =?utf-8?q?I=C3=B1igo_S=C3=A1ez_Casares?= <inigo.saez-casares@obspm.fr>
 License: GPL-3.0-or-later
@@ -12,7 +12,7 @@ Classifier: Intended Audience :: Science/Research
 Classifier: Topic :: Scientific/Engineering :: Physics
 Project-URL: repository, https://gitlab.obspm.fr/e-mantis/e-mantis.git
 Project-URL: documentation, https://e-mantis.pages.obspm.fr/e-mantis/index.html
-Requires-Python: <4.0,>=3.10
+Requires-Python: <3.15,>=3.10
 Requires-Dist: h5py<4.0,>=3.8
 Requires-Dist: scikit-learn<2,>=1
 Requires-Dist: numpy<3.0,>=1.24
@@ -44,13 +44,13 @@ e-MANTIS: Emulator for Multiple observable ANalysis in extended cosmological The
 Description
 -----------
 
-e-MANTIS is a python package containing emulators providing theoretical predictions for the non-linear large-scale structure formation in the context of alternative dark energy and gravity theories.
+e-MANTIS is a python package containing emulators providing theoretical predictions for the nonlinear large-scale structure formation in the context of alternative dark energy and gravity theories.
 It uses Gaussian processes to perform a fast and accurate interpolation between the outputs of high resolution cosmological :math:`N`-body simulations.
 The emulator supports multiple cosmological models and observables.
 It is divided in multiple modules, each one focusing on a particular type of observable.
 Currently, e-MANTIS provides emulators for the following quantities:
 
-* Matter power spectrum boost in f(R) gravity, described in: `The e-MANTIS emulator: fast predictions of the non-linear matter power spectrum in f(R)CDM cosmology <https://arxiv.org/abs/2303.08899>`_.
+* Matter power spectrum boost in f(R) gravity, described in: `The e-MANTIS emulator: fast predictions of the nonlinear matter power spectrum in f(R)CDM cosmology <https://arxiv.org/abs/2303.08899>`_.
 
 * Halo mass function in f(R)CDM and wCDM cosmologies, described in: `The e-MANTIS emulator: fast and accurate predictions of the halo mass function in f(R)CDM and wCDM cosmologies <https://arxiv.org/pdf/2410.05226>`_.
 
@@ -94,7 +94,7 @@ You can also retrain them manually using the CLI utility.
 Documentation and usage
 -----------------------
 
-The up-to-date documentation for this project (with code examples and a detailed API) is available `here <https://e-mantis.pages.obspm.fr/e-mantis/index.html>`_.
+The up-to-date documentation for this project (with code examples and a detailed API) is available `here <https://e-mantis.pages.obspm.fr/e-mantis>`_.
 
 Licence
 -------

{emantis-1.2.0 → emantis-1.2.2}/README.rst

@@ -21,13 +21,13 @@ e-MANTIS: Emulator for Multiple observable ANalysis in extended cosmological The
 Description
 -----------
 
-e-MANTIS is a python package containing emulators providing theoretical predictions for the non-linear large-scale structure formation in the context of alternative dark energy and gravity theories.
+e-MANTIS is a python package containing emulators providing theoretical predictions for the nonlinear large-scale structure formation in the context of alternative dark energy and gravity theories.
 It uses Gaussian processes to perform a fast and accurate interpolation between the outputs of high resolution cosmological :math:`N`-body simulations.
 The emulator supports multiple cosmological models and observables.
 It is divided in multiple modules, each one focusing on a particular type of observable.
 Currently, e-MANTIS provides emulators for the following quantities:
 
-* Matter power spectrum boost in f(R) gravity, described in: `The e-MANTIS emulator: fast predictions of the non-linear matter power spectrum in f(R)CDM cosmology <https://arxiv.org/abs/2303.08899>`_.
+* Matter power spectrum boost in f(R) gravity, described in: `The e-MANTIS emulator: fast predictions of the nonlinear matter power spectrum in f(R)CDM cosmology <https://arxiv.org/abs/2303.08899>`_.
 
 * Halo mass function in f(R)CDM and wCDM cosmologies, described in: `The e-MANTIS emulator: fast and accurate predictions of the halo mass function in f(R)CDM and wCDM cosmologies <https://arxiv.org/pdf/2410.05226>`_.
 
@@ -71,7 +71,7 @@ You can also retrain them manually using the CLI utility.
 Documentation and usage
 -----------------------
 
-The up-to-date documentation for this project (with code examples and a detailed API) is available `here <https://e-mantis.pages.obspm.fr/e-mantis/index.html>`_.
+The up-to-date documentation for this project (with code examples and a detailed API) is available `here <https://e-mantis.pages.obspm.fr/e-mantis>`_.
 
 Licence
 -------

{emantis-1.2.0 → emantis-1.2.2}/pyproject.toml

@@ -2,7 +2,7 @@
 authors = [
     { name = "Iñigo Sáez Casares", email = "inigo.saez-casares@obspm.fr" },
 ]
-requires-python = "<4.0,>=3.10"
+requires-python = "<3.15,>=3.10"
 dependencies = [
     "h5py <4.0,>=3.8",
     "scikit-learn <2,>=1",
@@ -12,8 +12,8 @@ dependencies = [
     "joblib <2.0.0,>=1.3.2",
 ]
 name = "emantis"
-version = "1.2.0"
-description = "A cosmological emulator for non-linear large-scale structure formation studies in alternative dark energy and gravity theories."
+version = "1.2.2"
+description = "A cosmological emulator for nonlinear large-scale structure formation studies in alternative dark energy and gravity theories."
 readme = "README.rst"
 classifiers = [
     "Programming Language :: Python :: 3",
@@ -72,6 +72,7 @@ dev = [
     "pytest>=8.4.1",
     "pytest-cov>=6",
     "pytest-pydocstyle>=2.4.0",
+    "pre-commit>=4.5.0",
 ]
 docs = [
     "sphinx",

emantis-1.2.2/src/emantis/__init__.py

@@ -0,0 +1,34 @@
+"""
+e-MANTIS
+========
+
+e-MANTIS is a python package containing emulators providing theoretical predictions
+for the nonlinear large-scale structure formation in the context of alternative
+dark energy and gravity theories.
+It uses Gaussian processes to perform a fast and accurate interpolation
+between the outputs of high resolution cosmological N-body simulations.
+The emulator supports multiple cosmological models and observables.
+It is divided in multiple modules, each one focusing on a particular type of observable.
+
+Available modules
+-----------------
+
+matter_power_spectrum
+    Emulators for the matter power spectrum.
+halo_mass_function
+    Emulator for the halo mass function.
+powerspectrum_matter
+    Emulators for the matter power spectrum.
+    Deprecated, use matter_power_spectrum instead.
+
+"""  # noqa: D400, D205
+
+import logging
+
+from . import halo_mass_function, matter_power_spectrum
+from .powerspectrum_matter import FofrBoost
+
+# Capture warnings by the logging system.
+logging.captureWarnings(True)
+
+__all__ = ["FofrBoost", "matter_power_spectrum", "halo_mass_function"]

{emantis-1.2.0 → emantis-1.2.2}/src/emantis/_cli.py

@@ -22,20 +22,19 @@ along with this program.  If not, see <https://www.gnu.org/licenses/>.
 
 import joblib
 
-from emantis.matter_power_spectrum import (
-    Sigma8Emulator,
-    NonLinearBoostEmulator,
-    NonLinearMGBoostEmulator,
-    _SIGMA8_MODELS,
-    _NL_BOOST_MODELS,
-    _NL_MG_BOOST_MODELS,
-)
-
 from emantis.halo_mass_function import (
-    HMFEmulator,
-    _HMF_MODELS,
     _FOF_B_VALUES,
+    _HMF_MODELS,
     _SO_DELTAC_VALUES,
+    HMFEmulator,
+)
+from emantis.matter_power_spectrum import (
+    _NL_BOOST_MODELS,
+    _NL_MG_BOOST_MODELS,
+    _SIGMA8_MODELS,
+    NonLinearBoostEmulator,
+    NonLinearMGBoostEmulator,
+    Sigma8Emulator,
 )
 
 n_jobs_max = 6
@@ -47,7 +46,6 @@ n_jobs = min(joblib.cpu_count(), n_jobs_max)
 # - type of emulators to train
 # Use typer package, see: https://packaging.python.org/en/latest/guides/creating-command-line-tools/
 def train_all_emulators():
-
     print(f"Will train all emulators using {n_jobs} processes.\n")
 
     print("----- Train matter_power_spectrum emulators -----\n")