electrokitty 1.0.2__tar.gz → 1.0.3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {electrokitty-1.0.2 → electrokitty-1.0.3}/PKG-INFO +3 -3
- electrokitty-1.0.3/README.md +7 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/cpp_code/electokitty_helper_file.cpp +4 -4
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty.egg-info/PKG-INFO +3 -3
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty.egg-info/SOURCES.txt +1 -3
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty.egg-info/not-zip-safe +1 -1
- electrokitty-1.0.3/electrokitty.egg-info/requires.txt +6 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/setup.py +10 -9
- electrokitty-1.0.2/README.md +0 -5
- electrokitty-1.0.2/electrokitty.egg-info/requires.txt +0 -6
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_MCMC_sampler.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_base_class.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_loss_functions.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_optimization_controler.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_parser.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_simulator.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/__init__.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/cpp_code/__init__.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/cpp_code/electrokitty_simulator.cpp +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/optimization_routines.py +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty.egg-info/dependency_links.txt +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty.egg-info/top_level.txt +0 -0
- {electrokitty-1.0.2 → electrokitty-1.0.3}/setup.cfg +0 -0
|
@@ -1,11 +1,11 @@
|
|
|
1
1
|
Metadata-Version: 1.2
|
|
2
2
|
Name: electrokitty
|
|
3
|
-
Version: 1.0.
|
|
3
|
+
Version: 1.0.3
|
|
4
4
|
Summary: A simulation and simple analysis tool for electrochemical data
|
|
5
|
-
Home-page:
|
|
5
|
+
Home-page: https://github.com/RedrumKid/ElectroKitty
|
|
6
6
|
Author: Ožbej Vodeb
|
|
7
7
|
Author-email: ozbej.vodeb@gmail.com
|
|
8
8
|
License: BSD
|
|
9
|
-
Description:
|
|
9
|
+
Description: UNKNOWN
|
|
10
10
|
Platform: UNKNOWN
|
|
11
11
|
Requires-Python: >=3.7
|
|
@@ -0,0 +1,7 @@
|
|
|
1
|
+
An Electrochemical simulator build in Python and C++
|
|
2
|
+
|
|
3
|
+
To install run: pip install electrokitty
|
|
4
|
+
|
|
5
|
+
The package offers a simulator capable of simulating various electrochemical
|
|
6
|
+
and chemical reaction mechanisms, a way to fit your mechanisms parameters, as well as other
|
|
7
|
+
data treating optinons.
|
|
@@ -39,7 +39,7 @@ struct EC_kinetics{
|
|
|
39
39
|
f = F/R/T;
|
|
40
40
|
el_nums = els;
|
|
41
41
|
vector<double> step_types(2);
|
|
42
|
-
for (int i = 0; i<consts.size(); i++){
|
|
42
|
+
for (int i = 0; i<int(consts.size()); i++){
|
|
43
43
|
step_types[0] = 1.;
|
|
44
44
|
step_types[1] = 1.;
|
|
45
45
|
if (kinetic_types[i]==1){
|
|
@@ -119,7 +119,7 @@ struct Params{
|
|
|
119
119
|
|
|
120
120
|
double iterate_over_concentration(vector<int> step, vector<double> c, double term, vector<double>isotherm){
|
|
121
121
|
int j;
|
|
122
|
-
for(int i = 0; i<step.size(); i++){
|
|
122
|
+
for(int i = 0; i<int(step.size()); i++){
|
|
123
123
|
j = step[i];
|
|
124
124
|
term*=c[j]*exp(-isotherm[j]*c[j]);
|
|
125
125
|
}
|
|
@@ -136,7 +136,7 @@ struct Params{
|
|
|
136
136
|
|
|
137
137
|
vector<double> update_K_matrix(vector<double> k_matrix, double term_f, double term_b, vector<int> step){
|
|
138
138
|
vector<int> check;
|
|
139
|
-
for (int i = 0; i<step.size(); i++){
|
|
139
|
+
for (int i = 0; i<int(step.size()); i++){
|
|
140
140
|
if (find(check.begin(), check.end(), step[i]) == check.end() ){
|
|
141
141
|
check.push_back(step[i]);
|
|
142
142
|
k_matrix[step[i]]+=-term_f;
|
|
@@ -223,7 +223,7 @@ struct Params{
|
|
|
223
223
|
|
|
224
224
|
double vector_dot_product(vector<double> a, vector<double> b){
|
|
225
225
|
double product = 0.;
|
|
226
|
-
for(int i = 0; i<a.size(); i++){
|
|
226
|
+
for(int i = 0; i<int(a.size()); i++){
|
|
227
227
|
product+=a[i]*b[i];
|
|
228
228
|
}
|
|
229
229
|
return product;
|
|
@@ -1,11 +1,11 @@
|
|
|
1
1
|
Metadata-Version: 1.2
|
|
2
2
|
Name: electrokitty
|
|
3
|
-
Version: 1.0.
|
|
3
|
+
Version: 1.0.3
|
|
4
4
|
Summary: A simulation and simple analysis tool for electrochemical data
|
|
5
|
-
Home-page:
|
|
5
|
+
Home-page: https://github.com/RedrumKid/ElectroKitty
|
|
6
6
|
Author: Ožbej Vodeb
|
|
7
7
|
Author-email: ozbej.vodeb@gmail.com
|
|
8
8
|
License: BSD
|
|
9
|
-
Description:
|
|
9
|
+
Description: UNKNOWN
|
|
10
10
|
Platform: UNKNOWN
|
|
11
11
|
Requires-Python: >=3.7
|
|
@@ -16,6 +16,4 @@ electrokitty.egg-info/dependency_links.txt
|
|
|
16
16
|
electrokitty.egg-info/not-zip-safe
|
|
17
17
|
electrokitty.egg-info/requires.txt
|
|
18
18
|
electrokitty.egg-info/top_level.txt
|
|
19
|
-
electrokitty/cpp_code/__init__.py
|
|
20
|
-
electrokitty/cpp_code/electokitty_helper_file.cpp
|
|
21
|
-
electrokitty/cpp_code/electrokitty_simulator.cpp
|
|
19
|
+
electrokitty/cpp_code/__init__.py
|
|
@@ -1 +1 @@
|
|
|
1
|
-
|
|
1
|
+
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
from pybind11.setup_helpers import Pybind11Extension, build_ext
|
|
2
2
|
from setuptools import setup, find_packages
|
|
3
3
|
|
|
4
|
-
__version__ = "1.0.
|
|
4
|
+
__version__ = "1.0.3"
|
|
5
5
|
|
|
6
6
|
ext_modules = [
|
|
7
7
|
Pybind11Extension(
|
|
@@ -16,17 +16,18 @@ setup(
|
|
|
16
16
|
version=__version__,
|
|
17
17
|
author="Ožbej Vodeb",
|
|
18
18
|
author_email="ozbej.vodeb@gmail.com",
|
|
19
|
-
|
|
19
|
+
url="https://github.com/RedrumKid/ElectroKitty",
|
|
20
20
|
description="A simulation and simple analysis tool for electrochemical data",
|
|
21
|
-
long_description="More information comming soon ",
|
|
22
21
|
packages = find_packages(),
|
|
23
22
|
ext_modules=ext_modules,
|
|
24
|
-
install_requires=[
|
|
25
|
-
|
|
26
|
-
|
|
27
|
-
|
|
28
|
-
|
|
29
|
-
|
|
23
|
+
install_requires=[
|
|
24
|
+
"setuptoold >= 68.2.2",
|
|
25
|
+
"pybind11 >= 2.13.5",
|
|
26
|
+
"numpy >= 1.26.4",
|
|
27
|
+
"scipy >= 1.11.3",
|
|
28
|
+
"matplotlib >= 3.8.0",
|
|
29
|
+
"cma >= 3.3.0"
|
|
30
|
+
],
|
|
30
31
|
cmdclass={"build_ext": build_ext},
|
|
31
32
|
zip_safe=False,
|
|
32
33
|
python_requires=">=3.7",
|
electrokitty-1.0.2/README.md
DELETED
|
File without changes
|
|
File without changes
|
|
File without changes
|
{electrokitty-1.0.2 → electrokitty-1.0.3}/electrokitty/ElectroKitty_optimization_controler.py
RENAMED
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|