eegunity 0.5.0__tar.gz

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  1. eegunity-0.5.0/LICENSE +21 -0
  2. eegunity-0.5.0/MANIFEST.in +3 -0
  3. eegunity-0.5.0/PKG-INFO +89 -0
  4. eegunity-0.5.0/README.md +58 -0
  5. eegunity-0.5.0/eegunity/__init__.py +1 -0
  6. eegunity-0.5.0/eegunity/__pycache__/__init__.cpython-310.pyc +0 -0
  7. eegunity-0.5.0/eegunity/__pycache__/__init__.cpython-311.pyc +0 -0
  8. eegunity-0.5.0/eegunity/__pycache__/_share_attributes.cpython-310.pyc +0 -0
  9. eegunity-0.5.0/eegunity/__pycache__/unifieddataset.cpython-310.pyc +0 -0
  10. eegunity-0.5.0/eegunity/__pycache__/unifieddataset.cpython-311.pyc +0 -0
  11. eegunity-0.5.0/eegunity/_modules/__init__.py +0 -0
  12. eegunity-0.5.0/eegunity/_modules/__pycache__/__init__.cpython-310.pyc +0 -0
  13. eegunity-0.5.0/eegunity/_modules/__pycache__/__init__.cpython-311.pyc +0 -0
  14. eegunity-0.5.0/eegunity/_modules/batch/__init__.py +1 -0
  15. eegunity-0.5.0/eegunity/_modules/batch/__pycache__/__init__.cpython-310.pyc +0 -0
  16. eegunity-0.5.0/eegunity/_modules/batch/__pycache__/__init__.cpython-311.pyc +0 -0
  17. eegunity-0.5.0/eegunity/_modules/batch/__pycache__/eeg_batch.cpython-310.pyc +0 -0
  18. eegunity-0.5.0/eegunity/_modules/batch/__pycache__/eeg_batch.cpython-311.pyc +0 -0
  19. eegunity-0.5.0/eegunity/_modules/batch/__pycache__/eeg_scores.cpython-310.pyc +0 -0
  20. eegunity-0.5.0/eegunity/_modules/batch/__pycache__/method_mixin_epoch.cpython-310.pyc +0 -0
  21. eegunity-0.5.0/eegunity/_modules/batch/eeg_batch.py +1541 -0
  22. eegunity-0.5.0/eegunity/_modules/batch/eeg_scores.py +510 -0
  23. eegunity-0.5.0/eegunity/_modules/batch/method_mixin_epoch.py +709 -0
  24. eegunity-0.5.0/eegunity/_modules/batch/utils.py +14 -0
  25. eegunity-0.5.0/eegunity/_modules/correction/__init__.py +1 -0
  26. eegunity-0.5.0/eegunity/_modules/correction/__pycache__/__init__.cpython-310.pyc +0 -0
  27. eegunity-0.5.0/eegunity/_modules/correction/__pycache__/eeg_correction.cpython-310.pyc +0 -0
  28. eegunity-0.5.0/eegunity/_modules/correction/eeg_correction.py +279 -0
  29. eegunity-0.5.0/eegunity/_modules/llm_booster/__init__.py +0 -0
  30. eegunity-0.5.0/eegunity/_modules/llm_booster/__pycache__/__init__.cpython-310.pyc +0 -0
  31. eegunity-0.5.0/eegunity/_modules/llm_booster/__pycache__/eeg_llm_booster.cpython-310.pyc +0 -0
  32. eegunity-0.5.0/eegunity/_modules/llm_booster/__pycache__/eeg_llm_des_parser.cpython-310.pyc +0 -0
  33. eegunity-0.5.0/eegunity/_modules/llm_booster/__pycache__/eeg_llm_file_parser.cpython-310.pyc +0 -0
  34. eegunity-0.5.0/eegunity/_modules/llm_booster/eeg_llm_booster.py +11 -0
  35. eegunity-0.5.0/eegunity/_modules/llm_booster/eeg_llm_des_parser.py +236 -0
  36. eegunity-0.5.0/eegunity/_modules/llm_booster/eeg_llm_file_parser.py +117 -0
  37. eegunity-0.5.0/eegunity/_modules/parser/__init__.py +1 -0
  38. eegunity-0.5.0/eegunity/_modules/parser/__pycache__/__init__.cpython-310.pyc +0 -0
  39. eegunity-0.5.0/eegunity/_modules/parser/__pycache__/eeg_parser.cpython-310.pyc +0 -0
  40. eegunity-0.5.0/eegunity/_modules/parser/__pycache__/eeg_parser_csv.cpython-310.pyc +0 -0
  41. eegunity-0.5.0/eegunity/_modules/parser/__pycache__/eeg_parser_mat.cpython-310.pyc +0 -0
  42. eegunity-0.5.0/eegunity/_modules/parser/eeg_parser.py +936 -0
  43. eegunity-0.5.0/eegunity/_modules/parser/eeg_parser_config.py +83 -0
  44. eegunity-0.5.0/eegunity/_modules/parser/eeg_parser_csv.py +161 -0
  45. eegunity-0.5.0/eegunity/_modules/parser/eeg_parser_mat.py +279 -0
  46. eegunity-0.5.0/eegunity/_resources/__init__.py +0 -0
  47. eegunity-0.5.0/eegunity/_resources/combined_montage.json +5237 -0
  48. eegunity-0.5.0/eegunity/_share_attributes.py +8 -0
  49. eegunity-0.5.0/eegunity/eegunity.egg-info/PKG-INFO +89 -0
  50. eegunity-0.5.0/eegunity/eegunity.egg-info/SOURCES.txt +75 -0
  51. eegunity-0.5.0/eegunity/eegunity.egg-info/dependency_links.txt +1 -0
  52. eegunity-0.5.0/eegunity/eegunity.egg-info/requires.txt +8 -0
  53. eegunity-0.5.0/eegunity/eegunity.egg-info/top_level.txt +1 -0
  54. eegunity-0.5.0/eegunity/unifieddataset.py +131 -0
  55. eegunity-0.5.0/eegunity/utils/__init__.py +5 -0
  56. eegunity-0.5.0/eegunity/utils/__pycache__/__init__.cpython-310.pyc +0 -0
  57. eegunity-0.5.0/eegunity/utils/__pycache__/__init__.cpython-311.pyc +0 -0
  58. eegunity-0.5.0/eegunity/utils/__pycache__/channel_align_raw.cpython-310.pyc +0 -0
  59. eegunity-0.5.0/eegunity/utils/__pycache__/con_udatasets.cpython-310.pyc +0 -0
  60. eegunity-0.5.0/eegunity/utils/__pycache__/con_udatasets.cpython-311.pyc +0 -0
  61. eegunity-0.5.0/eegunity/utils/__pycache__/h5.cpython-310.pyc +0 -0
  62. eegunity-0.5.0/eegunity/utils/__pycache__/h5.cpython-311.pyc +0 -0
  63. eegunity-0.5.0/eegunity/utils/__pycache__/handle_errors.cpython-310.pyc +0 -0
  64. eegunity-0.5.0/eegunity/utils/__pycache__/log_processing.cpython-310.pyc +0 -0
  65. eegunity-0.5.0/eegunity/utils/__pycache__/normalize.cpython-310.pyc +0 -0
  66. eegunity-0.5.0/eegunity/utils/__pycache__/normalize.cpython-311.pyc +0 -0
  67. eegunity-0.5.0/eegunity/utils/__pycache__/pipeline.cpython-310.pyc +0 -0
  68. eegunity-0.5.0/eegunity/utils/__pycache__/pipeline.cpython-311.pyc +0 -0
  69. eegunity-0.5.0/eegunity/utils/channel_align_raw.py +86 -0
  70. eegunity-0.5.0/eegunity/utils/con_udatasets.py +41 -0
  71. eegunity-0.5.0/eegunity/utils/h5.py +26 -0
  72. eegunity-0.5.0/eegunity/utils/handle_errors.py +40 -0
  73. eegunity-0.5.0/eegunity/utils/log_processing.py +8 -0
  74. eegunity-0.5.0/eegunity/utils/normalize.py +37 -0
  75. eegunity-0.5.0/eegunity/utils/pipeline.py +39 -0
  76. eegunity-0.5.0/eegunity/utils/split_hdf5_file.py +115 -0
  77. eegunity-0.5.0/eegunity.egg-info/PKG-INFO +89 -0
  78. eegunity-0.5.0/eegunity.egg-info/SOURCES.txt +81 -0
  79. eegunity-0.5.0/eegunity.egg-info/dependency_links.txt +1 -0
  80. eegunity-0.5.0/eegunity.egg-info/requires.txt +8 -0
  81. eegunity-0.5.0/eegunity.egg-info/top_level.txt +1 -0
  82. eegunity-0.5.0/setup.cfg +4 -0
  83. eegunity-0.5.0/setup.py +32 -0
eegunity-0.5.0/LICENSE ADDED
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+ The MIT License (MIT)
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+
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+ Copyright (c) 2022-present, EEGUnity Team
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in
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+ all copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
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+ THE SOFTWARE.
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+ include README.md
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+ include LICENSE
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+ recursive-include eegunity *
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+ Metadata-Version: 2.2
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+ Name: eegunity
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+ Version: 0.5.0
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+ Summary: An open source Python pacakge for large-scale EEG datasets processing
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+ Home-page: https://github.com/Baizhige/EEGUnity
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+ Author: EEGUnity Team
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+ Author-email: chengxuan.qin@outlook.com
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: License :: OSI Approved :: MIT License
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+ Classifier: Operating System :: OS Independent
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+ Requires-Python: >=3.6
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: mne>=1.5.1
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+ Requires-Dist: numpy>=1.24.0
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+ Requires-Dist: matplotlib>=3.7.3
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+ Requires-Dist: h5py>=3.12.1
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+ Requires-Dist: openai==1.35.1
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+ Requires-Dist: pdfplumber>=0.11.4
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+ Requires-Dist: pandas>=2.1.3
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+ Requires-Dist: scipy>=1.11.2
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+ Dynamic: author
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+ Dynamic: author-email
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+ Dynamic: classifier
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+ Dynamic: description
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+ Dynamic: description-content-type
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+ Dynamic: home-page
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+ Dynamic: requires-dist
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+ Dynamic: requires-python
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+ Dynamic: summary
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+
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+ # EEGUnity
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+
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+ ## Overview
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+
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+ EEGUnity is a Python package designed for processing and analyzing `large-scale EEG data` efficiently. This guide will walk you through the Usage on Windows, macOS, and Linux.
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+ For more details on the motivation, concepts, and vision behind this project, please refer to the paper [EEGUnity: Open-Source Tool in Facilitating Unified EEG Datasets Towards Large-Scale EEG Model](https://arxiv.org/abs/2410.07196)
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+
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+ ## Usage in Python Project
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+ (Notes: This repository is planned for release on PyPI and the Conda community once a stable version is achieved.)
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+ ### Prerequisites
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+
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+ - Python 3.x
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+ - Git
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+ - See [requirements.txt](docs%2Frequirements.txt)
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+
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+ ### Clone the Repository
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+
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+ First, clone the repository using Git:
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+
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+ #### Windows, macOS and Linux:
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+ ```bash
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+ git clone https://github.com/Baizhige/EEGUnity/.git
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+ ```
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+
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+ ### Usage in Python Projects
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+
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+ To use EEGUnity in your Python project, you will need to copy the `eegunity` folder to your project directory:
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+
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+ 1. **Copy the `eegunity` folder** from the cloned repository to your Python project's folder:
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+
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+ #### Windows:
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+ - Copy `EEGUnity\eegunity` into your project's directory.
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+
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+ #### macOS and Linux:
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+ - Copy `EEGUnity/eegunity` into your project's directory.
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+
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+ 2. Your project structure should resemble the following:
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+ ```
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+ my_project/
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+
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+ ├── eegunity/
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+ │ └── __init__.py
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+ └── your_script.py
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+ ```
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+ 3. Import the package in your Python project like this:
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+
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+ ```python
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+ from eegunity import UnifiedDataset
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+ ```
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+
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+ # Tutorial
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+ 1. How to Format Channel Name and Inspect Channel Data: [Click here to view the tutorial](./tutorial/How%20to%20Format%20Channel%20Name%20and%20Inspect%20Metadata.md)
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+ 2. How to Process Data and Export as h5Dataset: [Click here to view the tutorial](./tutorial/How%20to%20Process%20Data%20and%20Export%20as%20h5Dataset.md)
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+ 3. How to Read h5Dataset: [Click here to view the tutorial](./tutorial/How%20to%20Read%20h5Dataset.md)
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+
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+
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+ # Project Documentation
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+ You can view the project manual through the following link: [Click here to view the manual](https://eegunity.readthedocs.io/en/latest/)
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+ # EEGUnity
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+
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+ ## Overview
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+
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+ EEGUnity is a Python package designed for processing and analyzing `large-scale EEG data` efficiently. This guide will walk you through the Usage on Windows, macOS, and Linux.
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+ For more details on the motivation, concepts, and vision behind this project, please refer to the paper [EEGUnity: Open-Source Tool in Facilitating Unified EEG Datasets Towards Large-Scale EEG Model](https://arxiv.org/abs/2410.07196)
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+
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+ ## Usage in Python Project
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+ (Notes: This repository is planned for release on PyPI and the Conda community once a stable version is achieved.)
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+ ### Prerequisites
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+
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+ - Python 3.x
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+ - Git
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+ - See [requirements.txt](docs%2Frequirements.txt)
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+
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+ ### Clone the Repository
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+
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+ First, clone the repository using Git:
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+
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+ #### Windows, macOS and Linux:
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+ ```bash
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+ git clone https://github.com/Baizhige/EEGUnity/.git
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+ ```
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+
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+ ### Usage in Python Projects
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+
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+ To use EEGUnity in your Python project, you will need to copy the `eegunity` folder to your project directory:
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+
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+ 1. **Copy the `eegunity` folder** from the cloned repository to your Python project's folder:
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+
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+ #### Windows:
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+ - Copy `EEGUnity\eegunity` into your project's directory.
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+
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+ #### macOS and Linux:
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+ - Copy `EEGUnity/eegunity` into your project's directory.
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+
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+ 2. Your project structure should resemble the following:
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+ ```
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+ my_project/
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+
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+ ├── eegunity/
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+ │ └── __init__.py
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+ └── your_script.py
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+ ```
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+ 3. Import the package in your Python project like this:
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+
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+ ```python
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+ from eegunity import UnifiedDataset
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+ ```
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+
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+ # Tutorial
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+ 1. How to Format Channel Name and Inspect Channel Data: [Click here to view the tutorial](./tutorial/How%20to%20Format%20Channel%20Name%20and%20Inspect%20Metadata.md)
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+ 2. How to Process Data and Export as h5Dataset: [Click here to view the tutorial](./tutorial/How%20to%20Process%20Data%20and%20Export%20as%20h5Dataset.md)
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+ 3. How to Read h5Dataset: [Click here to view the tutorial](./tutorial/How%20to%20Read%20h5Dataset.md)
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+
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+
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+ # Project Documentation
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+ You can view the project manual through the following link: [Click here to view the manual](https://eegunity.readthedocs.io/en/latest/)
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+ from .unifieddataset import UnifiedDataset
File without changes
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+ from .eeg_batch import EEGBatch