eegprep 0.2.8__tar.gz → 0.2.10__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (130) hide show
  1. {eegprep-0.2.8/src/eegprep.egg-info → eegprep-0.2.10}/PKG-INFO +1 -1
  2. {eegprep-0.2.8 → eegprep-0.2.10}/pyproject.toml +1 -1
  3. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeglabcompat.py +9 -3
  4. {eegprep-0.2.8 → eegprep-0.2.10/src/eegprep.egg-info}/PKG-INFO +1 -1
  5. {eegprep-0.2.8 → eegprep-0.2.10}/LICENSE +0 -0
  6. {eegprep-0.2.8 → eegprep-0.2.10}/README.md +0 -0
  7. {eegprep-0.2.8 → eegprep-0.2.10}/setup.cfg +0 -0
  8. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/ICL_feature_extractor.py +0 -0
  9. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/__init__.py +0 -0
  10. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/bids_list_eeg_files.py +0 -0
  11. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/bids_preproc.py +0 -0
  12. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_artifacts.py +0 -0
  13. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_asr.py +0 -0
  14. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_channels.py +0 -0
  15. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_channels_nolocs.py +0 -0
  16. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_drifts.py +0 -0
  17. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_flatlines.py +0 -0
  18. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/clean_windows.py +0 -0
  19. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_autocorr.py +0 -0
  20. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_autocorr_fftw.py +0 -0
  21. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_autocorr_welch.py +0 -0
  22. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_checkset.py +0 -0
  23. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_compare.py +0 -0
  24. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_decodechan.py +0 -0
  25. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_eeg2mne.py +0 -0
  26. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_eegrej.py +0 -0
  27. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_findboundaries.py +0 -0
  28. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_interp.py +0 -0
  29. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_lat2point.py +0 -0
  30. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_mne2eeg.py +0 -0
  31. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_mne2eeg_epochs.py +0 -0
  32. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_options.py +0 -0
  33. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_picard.py +0 -0
  34. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_point2lat.py +0 -0
  35. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeg_rpsd.py +0 -0
  36. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eegobj.py +0 -0
  37. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eegrej.py +0 -0
  38. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/epoch.py +0 -0
  39. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/iclabel.py +0 -0
  40. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/iclabel_net.py +0 -0
  41. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/iclabel_net_load_py_measures.py +0 -0
  42. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/netICL.mat +0 -0
  43. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pinv.py +0 -0
  44. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_epoch.py +0 -0
  45. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_load_frombids.py +0 -0
  46. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_loadset.py +0 -0
  47. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_loadset_h5.py +0 -0
  48. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_reref.py +0 -0
  49. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_reref_helper.py +0 -0
  50. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_resample.py +0 -0
  51. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_rmbase.py +0 -0
  52. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_saveset.py +0 -0
  53. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pop_select.py +0 -0
  54. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pymat.py +0 -0
  55. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/redefine_functions.py +0 -0
  56. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/eeg_options_64bit.m +0 -0
  57. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/README.md +0 -0
  58. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/biosemi-128.locs +0 -0
  59. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/biosemi-sccn-128v1.locs +0 -0
  60. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/biosemi-sccn-128v2.locs +0 -0
  61. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/biosemi-sccn-256v1.locs +0 -0
  62. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/egi-gsn-hydrocell-129.locs +0 -0
  63. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/egi-gsn-hydrocell-257.locs +0 -0
  64. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/resources/montages/standard-10-5-342ch.locs +0 -0
  65. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/save_struct_as_hdf5.py +0 -0
  66. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/topoplot.py +0 -0
  67. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/__init__.py +0 -0
  68. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/asr.py +0 -0
  69. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/bids.py +0 -0
  70. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/coords.py +0 -0
  71. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/covariance.py +0 -0
  72. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/git.py +0 -0
  73. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/logs.py +0 -0
  74. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/misc.py +0 -0
  75. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/ransac.py +0 -0
  76. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/sigproc.py +0 -0
  77. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/spatial.py +0 -0
  78. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/stats.py +0 -0
  79. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/utils/testing.py +0 -0
  80. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep.egg-info/SOURCES.txt +0 -0
  81. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep.egg-info/dependency_links.txt +0 -0
  82. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep.egg-info/requires.txt +0 -0
  83. {eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep.egg-info/top_level.txt +0 -0
  84. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_ICL_feature_extractor.py +0 -0
  85. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_bids_preproc.py +0 -0
  86. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_bids_preproc_old.py +0 -0
  87. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_clean_artifacts.py +0 -0
  88. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_clean_asr.py +0 -0
  89. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_clean_drifts.py +0 -0
  90. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_clean_flatlines.py +0 -0
  91. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_clean_rawdata.py +0 -0
  92. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_clean_windows.py +0 -0
  93. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_autocorr.py +0 -0
  94. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_autocorr_fftw.py +0 -0
  95. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_autocorr_welch.py +0 -0
  96. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_compare.py +0 -0
  97. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_decodechan.py +0 -0
  98. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_eeg2mne.py +0 -0
  99. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_eegrej.py +0 -0
  100. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_interp.py +0 -0
  101. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_lat2point.py +0 -0
  102. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_mne2eeg.py +0 -0
  103. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_mne2eeg_epochs.py +0 -0
  104. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_picard.py +0 -0
  105. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeg_point2lat.py +0 -0
  106. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eegfindboundaries.py +0 -0
  107. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eeglabcompat.py +0 -0
  108. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eegobj.py +0 -0
  109. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_eegrej.py +0 -0
  110. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_epoch.py +0 -0
  111. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_fixtures.py +0 -0
  112. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_iclabel.py +0 -0
  113. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_import_edf.py +0 -0
  114. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_logs.py +0 -0
  115. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pinv.py +0 -0
  116. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pipeline.py +0 -0
  117. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_epoch.py +0 -0
  118. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_loadset_h5.py +0 -0
  119. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_reref.py +0 -0
  120. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_resample.py +0 -0
  121. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_rmbase.py +0 -0
  122. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_saveset.py +0 -0
  123. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pop_select.py +0 -0
  124. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pymat.py +0 -0
  125. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_spatial.py +0 -0
  126. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_topoplot.py +0 -0
  127. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_utils_asr.py +0 -0
  128. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_utils_covariance.py +0 -0
  129. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_utils_ransac.py +0 -0
  130. {eegprep-0.2.8 → eegprep-0.2.10}/tests/test_utils_testing.py +0 -0
{eegprep-0.2.8/src/eegprep.egg-info → eegprep-0.2.10}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: eegprep
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- Version: 0.2.8
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+ Version: 0.2.10
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  Summary: EEG preprocessing pipeline on Python
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  Author-email: Arnaud Delorme <adelorme@gmail.com>, Young Truong <dt.young112@gmail.com>
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  License: BSD 2-Clause License
{eegprep-0.2.8 → eegprep-0.2.10}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "eegprep"
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- version = "0.2.8"
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+ version = "0.2.10"
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  authors = [
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  { name="Arnaud Delorme", email="adelorme@gmail.com" },
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  { name="Young Truong", email="dt.young112@gmail.com" },
{eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eeglabcompat.py RENAMED
@@ -18,9 +18,15 @@ logger = logging.getLogger(__name__)
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  default_runtime = 'OCT'
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  # directory where temporary .set files are written
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- temp_dir = os.path.abspath(os.path.dirname(__file__) + '../../../temp')
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- if not os.path.exists(temp_dir):
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- os.makedirs(temp_dir, exist_ok=True)
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+ # use environment variable if it exists
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+ if 'TEMP_DIR' in os.environ:
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+ temp_dir = os.environ['TEMP_DIR']
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+ elif 'TMPDIR' in os.environ:
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+ temp_dir = os.environ['TMPDIR']
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+ else:
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+ temp_dir = os.path.abspath(os.path.dirname(__file__) + '../../../temp')
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+ if not os.path.exists(temp_dir):
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+ os.makedirs(temp_dir, exist_ok=True)
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  class MatlabWrapper:
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  """MATLAB engine wrapper that round-trips calls involving the EEGLAB data structure through files."""
{eegprep-0.2.8 → eegprep-0.2.10/src/eegprep.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: eegprep
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- Version: 0.2.8
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+ Version: 0.2.10
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  Summary: EEG preprocessing pipeline on Python
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  Author-email: Arnaud Delorme <adelorme@gmail.com>, Young Truong <dt.young112@gmail.com>
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  License: BSD 2-Clause License
{eegprep-0.2.8 → eegprep-0.2.10}/LICENSE RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/README.md RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/eegobj.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/iclabel.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/netICL.mat RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/src/eegprep/pinv.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/tests/test_logs.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pinv.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pipeline.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/tests/test_pymat.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/tests/test_spatial.py RENAMED
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{eegprep-0.2.8 → eegprep-0.2.10}/tests/test_topoplot.py RENAMED
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