earthkit-transforms 0.3.0__tar.gz

earthkit_transforms-0.3.0/.github/workflows/on-push.yml

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+name: on-push
+
+on:
+  push:
+    branches:
+    - main
+  pull_request:
+    branches:
+    - main
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+defaults:
+  run:
+    shell: bash -l {0}
+
+jobs:
+  pre-commit:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/setup-python@v5
+      with:
+        python-version: 3.x
+    - uses: pre-commit/action@v3.0.1
+
+  combine-environments:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/setup-python@v5
+      with:
+        python-version: 3.x
+    - name: Install conda-merge
+      run: |
+        python -m pip install conda-merge
+    - name: Combine environments
+      run: |
+        for SUFFIX in ci integration; do
+        conda-merge ci/environment-$SUFFIX.yml environment.yml > ci/combined-environment-$SUFFIX.yml || exit
+        done
+    - uses: actions/upload-artifact@v4
+      with:
+        name: combined-environments
+        path: ci/combined-environment-*.yml
+
+  unit-tests:
+    name: unit-tests
+    needs: combine-environments
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ['3.11']
+
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/download-artifact@v4
+      with:
+        name: combined-environments
+        path: ci
+    - name: Get current date
+      id: date
+      run: echo "date=$(date +%Y-%m-%d)" >> "${GITHUB_OUTPUT}"
+    - uses: mamba-org/setup-micromamba@v1
+      with:
+        environment-file: ci/combined-environment-ci.yml
+        environment-name: DEVELOP
+        cache-environment: true
+        cache-environment-key: environment-${{ steps.date.outputs.date }}
+        cache-downloads-key: downloads-${{ steps.date.outputs.date }}
+        create-args: >-
+          python=${{ matrix.python-version }}
+    - name: Install package
+      run: |
+        python -m pip install --no-deps -e .
+    - name: Run tests
+      run: |
+        make unit-tests COV_REPORT=xml
+
+  docs-build:
+    needs: [combine-environments, unit-tests]
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/download-artifact@v4
+      with:
+        name: combined-environments
+        path: ci
+    - name: Get current date
+      id: date
+      run: echo "date=$(date +%Y-%m-%d)" >> "${GITHUB_OUTPUT}"
+    - uses: mamba-org/setup-micromamba@v1
+      with:
+        environment-file: ci/combined-environment-ci.yml
+        environment-name: DEVELOP
+        cache-environment: true
+        cache-environment-key: environment-${{ steps.date.outputs.date }}
+        cache-downloads-key: downloads-${{ steps.date.outputs.date }}
+        create-args: >-
+          python=3.11
+    - name: Install package
+      run: |
+        python -m pip install --no-deps -e .
+    - name: Build documentation
+      run: |
+        make docs-build
+
+  integration-tests:
+    needs: [combine-environments, unit-tests]
+    if: |
+      success() && false
+    runs-on: ubuntu-latest
+
+    strategy:
+      matrix:
+        include:
+        - python-version: '3.11'
+          extra: -integration
+
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/download-artifact@v4
+      with:
+        name: combined-environments
+        path: ci
+    - name: Get current date
+      id: date
+      run: echo "date=$(date +%Y-%m-%d)" >> "${GITHUB_OUTPUT}"
+    - uses: mamba-org/setup-micromamba@v1
+      with:
+        environment-file: ci/combined-environment${{ matrix.extra }}.yml
+        environment-name: DEVELOP${{ matrix.extra }}
+        cache-environment: true
+        cache-environment-key: environment-${{ steps.date.outputs.date }}
+        cache-downloads-key: downloads-${{ steps.date.outputs.date }}
+        create-args: >-
+          python=${{ matrix.python-version }}
+    - name: Install package
+      run: |
+        python -m pip install --no-deps -e .
+    - name: Run tests
+      run: |
+        make unit-tests COV_REPORT=xml

earthkit_transforms-0.3.0/.github/workflows/on-release.yml

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+name: on-release
+
+on:
+  push:
+    tags:
+    - "*"
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+defaults:
+  run:
+    shell: bash -l {0}
+
+jobs:
+  combine-environments:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v3
+    - name: Install conda-merge
+      run: |
+        $CONDA/bin/python -m pip install conda-merge
+    - name: Combine environments
+      run: |
+        for SUFFIX in ci integration; do
+        $CONDA/bin/conda-merge ci/environment-$SUFFIX.yml environment.yml > ci/combined-environment-$SUFFIX.yml || exit
+        done
+    - name: Archive combined environments
+      uses: actions/upload-artifact@v3
+      with:
+        name: combined-environments
+        path: ci/combined-environment-*.yml
+
+  docs-build:
+    needs: [combine-environments]
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/download-artifact@v4
+      with:
+        name: combined-environments
+        path: ci
+    - name: Get current date
+      id: date
+      run: echo "date=$(date +%Y-%m-%d)" >> "${GITHUB_OUTPUT}"
+    - uses: mamba-org/setup-micromamba@v1
+      with:
+        environment-file: ci/combined-environment-ci.yml
+        environment-name: DEVELOP
+        cache-environment: true
+        cache-environment-key: environment-${{ steps.date.outputs.date }}
+        cache-downloads-key: downloads-${{ steps.date.outputs.date }}
+        create-args: >-
+          python=3.11
+    - name: Install package
+      run: |
+        python -m pip install --no-deps -e .
+    - name: Build documentation
+      run: |
+        make docs-build
+
+
+  distribution:
+    runs-on: ubuntu-latest
+    needs: [combine-environments]
+    steps:
+    - uses: actions/checkout@v3
+      with:
+        ref: ${{ github.event.pull_request.head.sha || github.ref }}
+    - name: Build distributions
+      run: |
+        $CONDA/bin/python -m pip install build
+        $CONDA/bin/python -m build
+    - name: Publish a Python distribution to PyPI
+      if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags')
+      uses: pypa/gh-action-pypi-publish@release/v1
+      with:
+        user: __token__
+        password: ${{ secrets.PYPI_API_TOKEN }}

earthkit_transforms-0.3.0/.gitignore

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+# setuptools-scm
+version.py
+
+# Sphinx automatic generation of API
+docs/_api/
+
+# Created by https://www.toptal.com/developers/gitignore/api/python,jupyternotebooks,vim,visualstudiocode,pycharm
+# Edit at https://www.toptal.com/developers/gitignore?templates=python,jupyternotebooks,vim,visualstudiocode,pycharm
+
+### JupyterNotebooks ###
+# gitignore template for Jupyter Notebooks
+# website: http://jupyter.org/
+
+# Ignore files used in development
+dev-notebook.ipynb
+test*.grib
+test*.nc
+
+
+.ipynb_checkpoints
+*/.ipynb_checkpoints/*
+
+# IPython
+profile_default/
+ipython_config.py
+
+# Remove previous ipynb_checkpoints
+#   git rm -r .ipynb_checkpoints/
+
+### PyCharm ###
+# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio, WebStorm and Rider
+# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839
+
+# User-specific stuff
+.idea/**/workspace.xml
+.idea/**/tasks.xml
+.idea/**/usage.statistics.xml
+.idea/**/dictionaries
+.idea/**/shelf
+
+# AWS User-specific
+.idea/**/aws.xml
+
+# Generated files
+.idea/**/contentModel.xml
+
+# Sensitive or high-churn files
+.idea/**/dataSources/
+.idea/**/dataSources.ids
+.idea/**/dataSources.local.xml
+.idea/**/sqlDataSources.xml
+.idea/**/dynamic.xml
+.idea/**/uiDesigner.xml
+.idea/**/dbnavigator.xml
+
+# Gradle
+.idea/**/gradle.xml
+.idea/**/libraries
+
+# Gradle and Maven with auto-import
+# When using Gradle or Maven with auto-import, you should exclude module files,
+# since they will be recreated, and may cause churn.  Uncomment if using
+# auto-import.
+# .idea/artifacts
+# .idea/compiler.xml
+# .idea/jarRepositories.xml
+# .idea/modules.xml
+# .idea/*.iml
+# .idea/modules
+# *.iml
+# *.ipr
+
+# CMake
+cmake-build-*/
+
+# Mongo Explorer plugin
+.idea/**/mongoSettings.xml
+
+# File-based project format
+*.iws
+
+# IntelliJ
+out/
+
+# mpeltonen/sbt-idea plugin
+.idea_modules/
+
+# JIRA plugin
+atlassian-ide-plugin.xml
+
+# Cursive Clojure plugin
+.idea/replstate.xml
+
+# SonarLint plugin
+.idea/sonarlint/
+
+# Crashlytics plugin (for Android Studio and IntelliJ)
+com_crashlytics_export_strings.xml
+crashlytics.properties
+crashlytics-build.properties
+fabric.properties
+
+# Editor-based Rest Client
+.idea/httpRequests
+
+# Android studio 3.1+ serialized cache file
+.idea/caches/build_file_checksums.ser
+
+### PyCharm Patch ###
+# Comment Reason: https://github.com/joeblau/gitignore.io/issues/186#issuecomment-215987721
+
+# *.iml
+# modules.xml
+# .idea/misc.xml
+# *.ipr
+
+# Sonarlint plugin
+# https://plugins.jetbrains.com/plugin/7973-sonarlint
+.idea/**/sonarlint/
+
+# SonarQube Plugin
+# https://plugins.jetbrains.com/plugin/7238-sonarqube-community-plugin
+.idea/**/sonarIssues.xml
+
+# Markdown Navigator plugin
+# https://plugins.jetbrains.com/plugin/7896-markdown-navigator-enhanced
+.idea/**/markdown-navigator.xml
+.idea/**/markdown-navigator-enh.xml
+.idea/**/markdown-navigator/
+
+# Cache file creation bug
+# See https://youtrack.jetbrains.com/issue/JBR-2257
+.idea/$CACHE_FILE$
+
+# CodeStream plugin
+# https://plugins.jetbrains.com/plugin/12206-codestream
+.idea/codestream.xml
+
+# Azure Toolkit for IntelliJ plugin
+# https://plugins.jetbrains.com/plugin/8053-azure-toolkit-for-intellij
+.idea/**/azureSettings.xml
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+test_data
+
+# IPython
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+### Vim ###
+# Swap
+[._]*.s[a-v][a-z]
+!*.svg  # comment out if you don't need vector files
+[._]*.sw[a-p]
+[._]s[a-rt-v][a-z]
+[._]ss[a-gi-z]
+[._]sw[a-p]
+
+# Session
+Session.vim
+Sessionx.vim
+
+# Temporary
+.netrwhist
+*~
+# Auto-generated tag files
+tags
+# Persistent undo
+[._]*.un~
+
+### VisualStudioCode ###
+.vscode/
+# .vscode/*
+# !.vscode/settings.json
+# !.vscode/tasks.json
+# !.vscode/launch.json
+# !.vscode/extensions.json
+# !.vscode/*.code-snippets
+
+# Local History for Visual Studio Code
+.history/
+
+# Built Visual Studio Code Extensions
+*.vsix
+
+### VisualStudioCode Patch ###
+# Ignore all local history of files
+.history
+.ionide
+
+# Support for Project snippet scope
+.vscode/*.code-snippets
+
+# Ignore code-workspaces
+*.code-workspace
+
+# End of https://www.toptal.com/developers/gitignore/api/python,jupyternotebooks,vim,visualstudiocode,pycharm
+
+notebooks/dev-notebook.ipynb

earthkit_transforms-0.3.0/.pre-commit-config.yaml

@@ -0,0 +1,39 @@
+repos:
+- repo: https://github.com/pre-commit/pre-commit-hooks
+  rev: v4.5.0
+  hooks:
+  - id: trailing-whitespace
+  - id: end-of-file-fixer
+  - id: check-json
+  - id: check-yaml
+  - id: check-toml
+  - id: check-added-large-files
+  - id: check-merge-conflict
+  - id: debug-statements
+  - id: mixed-line-ending
+- repo: https://github.com/keewis/blackdoc
+  rev: v0.3.9
+  hooks:
+  - id: blackdoc
+    additional_dependencies: [black==23.11.0]
+- repo: https://github.com/astral-sh/ruff-pre-commit
+  rev: v0.1.6
+  hooks:
+  - id: ruff
+    args: [--fix, --show-fixes]
+  - id: ruff-format
+- repo: https://github.com/executablebooks/mdformat
+  rev: 0.7.17
+  hooks:
+  - id: mdformat
+- repo: https://github.com/macisamuele/language-formatters-pre-commit-hooks
+  rev: v2.11.0
+  hooks:
+  - id: pretty-format-yaml
+    args: [--autofix, --preserve-quotes]
+  - id: pretty-format-toml
+    args: [--autofix]
+- repo: https://github.com/gitleaks/gitleaks
+  rev: v8.18.1
+  hooks:
+  - id: gitleaks

earthkit_transforms-0.3.0/.readthedocs.yaml

@@ -0,0 +1,32 @@
+# .readthedocs.yaml
+# Read the Docs configuration file
+# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details
+
+# Required
+version: 2
+
+# Set the OS, Python version and other tools you might need
+build:
+  os: ubuntu-22.04
+  tools:
+    python: "3.10"
+    # You can also specify other tool versions:
+    # nodejs: "19"
+    # rust: "1.64"
+    # golang: "1.19"
+
+# Build documentation in the "docs/" directory with Sphinx
+sphinx:
+  configuration: docs/conf.py
+
+# Optionally build your docs in additional formats such as PDF and ePub
+# formats:
+#    - pdf
+#    - epub
+
+# Optional but recommended, declare the Python requirements required
+# to build your documentation
+# See https://docs.readthedocs.io/en/stable/guides/reproducible-builds.html
+python:
+  install:
+  - requirements: docs/requirements.txt

earthkit_transforms-0.3.0/Dockerfile

@@ -0,0 +1,12 @@
+FROM continuumio/miniconda3
+
+WORKDIR /src/earthkit-transforms
+
+COPY environment.yml /src/earthkit-transforms/
+
+RUN conda install -c conda-forge gcc python=3.10 \
+    && conda env update -n base -f environment.yml
+
+COPY . /src/earthkit-transforms
+
+RUN pip install --no-deps -e .