dummy-spatialdata 0.1.6__tar.gz → 0.1.8__tar.gz

{dummy_spatialdata-0.1.6 → dummy_spatialdata-0.1.8}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: dummy-spatialdata
-Version: 0.1.6
+Version: 0.1.8
 Summary: A package for creating arbitrary spatialdata for testing purposes.
 Project-URL: Documentation, https://dummy-spatialdata.readthedocs.io/
 Project-URL: Homepage, https://github.com/BIMSBBioinfo/dummy-spatialdata

{dummy_spatialdata-0.1.6 → dummy_spatialdata-0.1.8}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
 
 [project]
 name = "dummy-spatialdata"
-version = "0.1.6"
+version = "0.1.8"
 description = "A package for creating arbitrary spatialdata for testing purposes."
 readme = "README.md"
 requires-python = ">=3.12"

{dummy_spatialdata-0.1.6 → dummy_spatialdata-0.1.8}/src/dummy_spatialdata/generate_transformations.py

@@ -10,6 +10,8 @@ from spatialdata.transformations import (
     Identity
 )
 
+import numpy as np
+
 def generate_transformations(
     trans: Optional[dict] = None
 ) -> list[BaseTransformation]:
@@ -60,6 +62,16 @@ def generate_transformations(
             tr = Translation([10, 20], axes = ('x', 'y'))
         elif tr == 'scale':
             tr = Scale([0.5, 0.5], axes = ('x', 'y'))
+        elif tr == 'rotation':
+            theta = np.deg2rad(15)
+            c = np.cos(theta)
+            s = np.sin(theta)
+            tr = Affine(matrix = [
+                    [c, -s, 0],
+                    [s, c, 0],
+                    [0, 0, 1],
+                ], 
+                input_axes=('x', 'y'), output_axes=('x', 'y'))
         elif tr == 'affine':
             tr = Affine(matrix = [
                     [0.5, 0.2, 0],
@@ -106,7 +118,6 @@ def get_basetransformations(
     coordinate_systems: dict = {}
 ) -> dict:
     
-    print(coordinate_systems)
     if not isinstance(coordinate_systems, dict):
         raise ValueError('Malformed coordinate system! e.g. \{\'global\': \{\'transformations\': [\'affine\'], \'shape\': \{\'x\': 2000, \'y\': 2000\}\}')
 

{dummy_spatialdata-0.1.6 → dummy_spatialdata-0.1.8}/tests/test_transformations.py

@@ -62,6 +62,9 @@ def test_transformations():
     trans = generate_transformations({'global': {'transformations': ['scale'], 'shape': {'x': 1000, 'y': 1000}}})
     assert isinstance(trans['global'], Scale)
 
+    trans = generate_transformations({'global3': {'transformations': ['rotation'], 'shape': {'x': 1000, 'y': 1000}}})
+    assert isinstance(trans['global3'], Affine) # the rotation is basically returning an Affine transformation, for now
+
     trans = generate_transformations({'global3': {'transformations': ['affine'], 'shape': {'x': 1000, 'y': 1000}}})
     assert isinstance(trans['global3'], Affine)