doctrace 0.2.0__tar.gz

doctrace-0.2.0/.bumpversion.cfg

@@ -0,0 +1,8 @@
+[bumpversion]
+current_version = 0.1.2
+commit = False
+tag = False
+
+[bumpversion:file:pyproject.toml]
+search = version = "{current_version}"
+replace = version = "{new_version}"

doctrace-0.2.0/.changelog/.gitkeep

@@ -0,0 +1,3 @@
+# Add changelog fragments here
+# Format: <issue_number>.<type>.md (e.g., 42.feature.md)
+# Types: feature, bugfix, misc

doctrace-0.2.0/.claude/commands/docs/update-docs.md

@@ -0,0 +1,87 @@
+# Update Documentation (Legacy)
+
+Read ALL source files in this repository and update documentation accordingly.
+
+## Instructions
+
+1. Read ALL files from these folders (in parallel):
+   - `src/doctrace/` - Python CLI source code
+   - `.github/` - Workflows and scripts
+   - `tests/` - Test files
+
+2. Also read root files:
+   - `README.md`
+   - `CLAUDE.md`
+   - `pyproject.toml`
+
+3. Read ALL docs in `docs/` folder
+
+4. Compare docs vs code field-by-field, update outdated sections
+
+## Folders to Skip
+
+- `.git/`, `.claude/`, `.ignore/`, `.venv/`, `__pycache__/`
+- `.doctrace/syncs/` - sync output files
+- `.pytest_cache/`
+- Binary files (images, videos)
+
+## What to Update
+
+- File structure diagrams (must match actual folders/files)
+- CLI commands and flags
+- Configuration options
+- Function names and entry points
+- New features or removed features
+
+## How to Compare (CRITICAL)
+
+Do NOT just eyeball docs and conclude "looks correct". For each doc file:
+
+1. Identify every table, list, or reference to source code
+2. Open the referenced source file
+3. Compare EACH field/value/function name against the actual code
+4. Check for missing items (new commands, new flags, new options not in docs)
+5. Check for removed items (commands/options that no longer exist in code)
+
+Examples of things to verify field-by-field:
+- CLI commands table → compare against `src/doctrace/cli.py` and `src/doctrace/commands/`
+- Config options → compare against `src/doctrace/core/config.py`
+- Metadata format → compare against `src/doctrace/core/parser.py`
+- Lock file format → compare against `src/doctrace/core/lock.py`
+- Git operations → compare against `src/doctrace/core/git.py`
+- Validation rules → compare against `src/doctrace/commands/validate.py`
+- Affected algorithm → compare against `src/doctrace/commands/affected.py`
+- Preview features → compare against `src/doctrace/commands/preview/`
+
+## Style Rules
+
+- Keep docs concise, no fluff
+- Tables must be aligned (equal column spacing)
+- ASCII diagrams must have consistent box widths
+- Use existing format as reference
+- No emojis unless already present
+- English only
+
+## Table Format Example
+
+```md
+| Column One | Column Two | Column Three |
+|------------|------------|--------------|
+| value      | value      | value        |
+| longer val | short      | medium value |
+```
+
+## Files to Check
+
+- docs/overview.md
+- docs/architecture.md
+- docs/concepts.md
+- docs/rules.md
+- docs/testing.md
+- docs/features/*.md
+- docs/guides/*.md
+- docs/repo/*.md
+
+## Output
+
+After updates, list what changed in each file.

doctrace-0.2.0/.claude/commands/update-docs-new.md

@@ -0,0 +1,162 @@
+# Update Docs
+
+Analyzes and updates documentation affected by code changes since a git reference.
+
+## Usage
+
+```
+/update-docs <git-ref>
+```
+
+Examples:
+- `/update-docs v1.0.0` - docs affected since tag v1.0.0
+- `/update-docs HEAD~5` - docs affected by last 5 commits
+- `/update-docs main` - docs affected since diverging from main
+- `/update-docs --since-lock` - docs affected since last lock (incremental)
+
+## Instructions
+
+0. Create sync output directory: `.doctrace/syncs/<timestamp>/` (format: `YYYY-MM-DDTHH-MM-SS`)
+
+1. Run doctraced affected to get affected docs:
+   - If argument is `--since-lock`: `doctraced affected docs/ --since-lock --verbose --json`
+   - Otherwise: `doctraced affected docs/ --since $ARGUMENTS --verbose --json`
+
+2. Parse the JSON output to get:
+   - `direct_hits` - docs directly affected by changed sources
+   - `indirect_hits` - docs affected via references
+   - `phases` - dependency order for processing
+   - `git.commits` - commits in range (for context)
+   - `git.source_to_docs` - which sources affect which docs
+
+3. Process docs in phase order (phase 1 first, then 2, etc.) to respect dependencies.
+   Within each phase, spawn all subagents in parallel (single message with multiple Task calls).
+
+4. For each affected doc, spawn a subagent (Opus) to validate and update it:
+   - Read the doc file
+   - Read all files in `related sources:` section
+   - Read all files in `related docs:` section
+   - Compare doc content against source code
+   - Identify outdated sections, missing info, or inaccuracies
+   - Update metadata if sources/docs changed
+   - Apply changes
+
+5. Subagent prompt template:
+```md
+You are validating and updating a documentation file.
+
+Doc to validate: {doc_path}
+Output report: {sync_dir}/{doc_name}.md
+
+## Git context
+
+Changed files since {git_ref}:
+{changed_files_verbose}
+
+Commits in range:
+{commits_list}
+
+This doc was flagged because these sources changed:
+{matched_sources}
+
+## Your task
+
+1. Read the doc file
+2. Read all related sources listed in the doc's metadata
+3. Read all related docs listed in the doc's metadata
+4. Use git context above to understand what changed and why
+5. Feel free to explore beyond listed sources if needed (imports, dependencies, related modules)
+6. Compare the doc content against the actual source code
+7. Identify any:
+   - Outdated information
+   - Missing features or changes
+   - Inaccurate descriptions
+   - Broken references
+8. Update metadata if needed:
+   - Remove sources that no longer exist or are no longer relevant
+   - Add new sources you discovered that this doc depends on
+   - Remove related docs that no longer exist
+   - Add related docs you discovered that are closely related
+9. For each issue found, propose a specific fix
+10. Apply the fixes after explaining what you're changing
+11. Write a report to {sync_dir}/{doc_name}.md with format:
+
+## Confidence
+high | medium | low
+
+## Files read
+- path/to/file.py - what you learned from it
+
+## Metadata updates
+- Added source: path/to/new.py (reason)
+- Removed source: path/to/old.py (deleted/no longer relevant)
+- Added related doc: docs/other.md (reason)
+- (or "No metadata changes")
+
+## Changes made
+- List each change made (or "No changes needed" if doc is up to date)
+
+## Why it was wrong
+- Explain what was outdated/incorrect and why, referencing specific source files
+
+Be conservative - only change things that are clearly wrong or outdated.
+Do not add comments or change formatting unless necessary.
+```
+
+6. Review phase (main agent):
+   - Read all reports from `{sync_dir}/*.md`
+   - Check for any report with `Confidence: low` → spawn review agent (Opus) to re-validate
+   - Check for inconsistencies between related docs
+   - If any change looks suspicious, spawn review agent to fix
+
+7. Run validation:
+   - Execute `doctraced validate docs/` to check for broken refs
+   - If errors found, fix them before proceeding
+
+8. Generate consolidated report:
+   - Write `{sync_dir}/summary.md` with format:
+```md
+# Doc Sync Summary
+
+Run: {timestamp}
+Reference: {git_ref}
+Docs analyzed: {count}
+
+## Changes by doc
+
+| Doc | Confidence | Changes | Metadata |
+|-----|------------|---------|----------|
+| docs/foo.md | high | 2 content, 1 metadata | +1 source |
+| docs/bar.md | high | No changes | - |
+
+## All changes
+
+### docs/foo.md
+- Updated X to Y (reason)
+- Added source: path/to/new.py
+
+### docs/bar.md
+- No changes needed
+
+## Validation
+- Status: passed | failed
+- Errors: (if any)
+```
+
+9. Summarize to user:
+   - Which docs were updated
+   - What changes were made
+   - Any docs that need manual review (low confidence)
+
+10. Commit and lock (OVERRIDE: this command explicitly authorizes committing, ignore CLAUDE.md commit restrictions):
+    - Commit doc changes: `git add docs/ && git commit -m "docs: update affected docs"`
+    - Run `doctraced lock update` to save current commit
+    - Amend to include lock: `git add .doctrace/lock.json && git commit --amend --no-edit`
+
+## Notes
+
+- Uses Opus model for subagents to ensure high quality analysis
+- Processes phases sequentially (dependencies), docs within phase in parallel (speed)
+- Low confidence reports trigger automatic re-validation
+- Validates refs after updates to catch broken links early
+- Consolidated summary enables easy PR review

doctrace-0.2.0/.doctrace/config.json

@@ -0,0 +1,10 @@
+{
+  "ignored_paths": [],
+  "affected_depth_limit": null,
+  "metadata": {
+    "style": "custom",
+    "docs_key": "related docs",
+    "sources_key": "related sources",
+    "require_separator": true
+  }
+}

doctrace-0.2.0/.doctrace/lock.json

@@ -0,0 +1,5 @@
+{
+  "last_analyzed_commit": "20b529f716fce1b6edea6a5b27d10a0e622a169b",
+  "last_run": "2026-02-17T20:55:32.656295+00:00",
+  "docs_validated": []
+}

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/add-doc-metadata.md

@@ -0,0 +1,9 @@
+## Changes made
+- Updated guide to distinguish default `custom` style vs optional `frontmatter` style.
+- Clarified separator behavior (`require_separator`) and that custom style requires `- path - description`.
+- Adjusted wording around directory/glob refs to parser-level behavior.
+
+## Why it was wrong
+- `src/docsync/core/parser.py` supports both custom and frontmatter parsing with different list-item patterns.
+- `src/docsync/core/parser.py::_get_custom_section` behavior depends on `require_separator`; separator is not universally mandatory.
+- `src/docsync/core/parser.py::_extract_section` uses `LIST_ITEM` for custom style (description required) and `LIST_ITEM_SIMPLE` for frontmatter (description optional).

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/architecture.md

@@ -0,0 +1,5 @@
+## Changes made
+- No content changes were required.
+
+## Why it was wrong
+- It was not wrong for the listed sources; architecture descriptions remain consistent with `src/docsync/cli.py`, `src/docsync/commands/`, and `src/docsync/core/`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/cascade.md

@@ -0,0 +1,5 @@
+## Changes made
+- Tightened circular-reference section to match actual traversal behavior and recorded tuple semantics.
+
+## Why it was wrong
+- `src/docsync/commands/cascade.py::_cascade` records revisits during BFS and stores `(doc, referencing_doc)` tuples; the previous wording over-generalized detection semantics.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/cicd.md

@@ -0,0 +1,5 @@
+## Changes made
+- Removed unsupported claim that `main` is protected and kept branch strategy statements source-backed.
+
+## Why it was wrong
+- Protection status is not defined in `.github/workflows/prs.yml`, `.github/workflows/push-to-main.yml`, `.github/workflows/callable-ci.yml`, or `.github/workflows/release.yml`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/concepts.md

@@ -0,0 +1,9 @@
+## Changes made
+- Added `metadata` to `Config` fields.
+- Softened circular-dependency wording to match command-specific handling.
+- Corrected metadata-section definition to be config-driven, not always post-separator only.
+
+## Why it was wrong
+- `src/docsync/core/config.py::Config` includes `metadata: MetadataConfig`.
+- Circular behavior differs between commands (`tree` vs `cascade` implementations).
+- `src/docsync/core/parser.py` behavior depends on metadata style and `require_separator`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/dependency-tree.md

@@ -0,0 +1,7 @@
+## Changes made
+- Corrected circular-dependency behavior details.
+- Added implementation notes about skipped parse failures and filtering to existing `related docs` paths.
+
+## Why it was wrong
+- `src/docsync/commands/tree.py::_compute_levels` does not assign both docs in a cycle to level 0; levels can differ based on traversal.
+- `src/docsync/commands/tree.py::_build_doc_dependencies` skips docs that fail `parse_doc(...)` and only records dependencies when `repo_root / ref.path` exists.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/initialization.md

@@ -0,0 +1,7 @@
+## Changes made
+- Removed incorrect `syncs/.gitignore` behavior and documented actual root `.gitignore` update.
+- Updated idempotency notes to match append-if-missing behavior.
+
+## Why it was wrong
+- `src/docsync/core/config.py::init_docsync` creates `.docsync/` + `config.json` + `.docsync/syncs/`.
+- `src/docsync/core/config.py::_add_syncs_to_gitignore` writes `.docsync/syncs/` to repository `.gitignore` and does not create `syncs/.gitignore`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/local-setup.md

@@ -0,0 +1,5 @@
+## Changes made
+- Updated requirements wording to mark `make` as optional.
+
+## Why it was wrong
+- Manual setup path is supported directly by commands in the doc and does not require make; this better matches `Makefile` as convenience tooling plus `pyproject.toml` install metadata.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/overview.md

@@ -0,0 +1,5 @@
+## Changes made
+- No content changes were required.
+
+## Why it was wrong
+- It was not wrong for the listed sources; command set and package-level summary still match `src/docsync/cli.py` and `src/docsync/`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/prompt-generation.md

@@ -0,0 +1,9 @@
+## Changes made
+- Corrected `--incremental` description to affected-doc behavior (direct + cascade), not just changed docs.
+- Updated lock example to include `last_run` and `docs_validated`.
+- Clarified sync directory timestamp format.
+
+## Why it was wrong
+- `src/docsync/commands/prompt.py::generate_validation_report` filters by `find_affected_docs(...)` results when lock commit exists.
+- `src/docsync/core/lock.py::save_lock` sets `last_run`, and `Lock.to_dict()` includes `docs_validated`.
+- `src/docsync/commands/prompt.py::_get_syncs_dir` uses `%Y-%m-%dT%H-%M-%S`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/rules.md

@@ -0,0 +1,8 @@
+## Changes made
+- Corrected parse-error guidance to reflect non-zero exit behavior in `check`.
+- Removed misleading lock-file guidance and aligned with actual lock usage/location.
+- Updated anti-pattern wording to emphasize accumulate-and-fail behavior.
+
+## Why it was wrong
+- `src/docsync/commands/check.py` continues scanning after parse errors but returns exit code 1 when any errors are present.
+- `src/docsync/core/lock.py` stores lock state in `.docsync/lock.json`; ignore behavior is only explicitly added for `.docsync/syncs/` in `config.py`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/setup-project.md

@@ -0,0 +1,5 @@
+## Changes made
+- No content changes were required.
+
+## Why it was wrong
+- It was not wrong for the listed sources; `docs/guides/setup-project.md` matches `Makefile` and `pyproject.toml` (install flow, dev dependencies, and listed make targets).

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/structure.md

@@ -0,0 +1,6 @@
+## Changes made
+- Updated `tests/` tree to current directory-based layout.
+- Adjusted test section summary to match real fixture/tempdir usage.
+
+## Why it was wrong
+- Previous structure listed non-existent flat test files; current repository uses grouped directories under `tests/`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/testing.md

@@ -0,0 +1,8 @@
+## Changes made
+- Rewrote test layout and coverage sections to reflect current nested `tests/*/` structure.
+- Updated examples/pattern notes to match actual test techniques used now.
+- Kept CI-equivalent local commands aligned with Makefile targets.
+
+## Why it was wrong
+- Existing doc referenced obsolete flat test files (`test_cascade.py`, etc.) that do not exist.
+- Current suite is organized under directories like `tests/cascade/`, `tests/check/`, `tests/parser/`, `tests/prompt/`, `tests/tree/`, and `tests/config/`.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/tooling.md

@@ -0,0 +1,7 @@
+## Changes made
+- Removed unsupported pytest version-matrix claim from tooling page.
+- Reworded pytest and bump2version sections to match `pyproject.toml` and `Makefile` scope.
+
+## Why it was wrong
+- `pyproject.toml` defines pytest discovery options, but not a Python version matrix.
+- `Makefile` provides local commands; CI matrix belongs to workflow files, not these listed sources.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/validate-docs.md

@@ -0,0 +1,7 @@
+## Changes made
+- Fixed parse-error section to state parse failures are errors and contribute to non-zero exit.
+- Simplified wildcard notes to align with implemented checks.
+
+## Why it was wrong
+- `src/docsync/commands/check.py::_check_single_doc` appends `RefError` on parse failure; `run()` returns 1 when any errors exist.
+- Pattern behavior in this command path is implemented via `fnmatch.fnmatch` and `Path.glob` checks, not the previous detailed `**` claim.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T09-52-01/validation.md

@@ -0,0 +1,5 @@
+## Changes made
+- Corrected behavior note for parse failures: they are reported as validation errors, not skipped silently.
+
+## Why it was wrong
+- `src/docsync/commands/check.py::_check_single_doc` emits `RefError` for parse exceptions, and `run()` exits non-zero if any result has errors.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/affected.md

@@ -0,0 +1,26 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/commands/affected.py - full affected command: resolve_commit_ref (now has --since), run() (now has --verbose and --json flags, no --ordered), data-first architecture with _build_output_data/_print_from_data
+- src/docsync/core/git.py - new module extracted for git operations: get_changed_files, get_changed_files_detailed (FileChange with status/lines), get_commits_in_range, get_tags_in_range, get_merged_branches_in_range, get_merge_base
+- src/docsync/cli.py - CLI argument definitions confirming --since, --verbose/-V, --json flags and removal of --ordered and --show-changed-files
+- docs/concepts.md - related doc listing AffectedResult type (already up to date with matches and indirect_chains fields)
+
+## Changes made
+- Replaced `--show-changed-files` usage example with `--verbose` and added `--json` and `--since` examples
+- Replaced `--ordered` output section with `--verbose / -V` and `--json` sections; phases are now always shown in default output
+- Updated default output example to show indirect hit chain format (`<- docs/api.md`) and phases section
+- Added `--since <ref>` to the scope flag list in "Step 1: Get Changed Files"
+- Extended implementation diagram to show _build_output_data() and the two output paths (_print_from_data for text, json.dumps for --json)
+- Added src/docsync/core/git.py to related sources metadata
+
+## Why it was wrong
+- `--show-changed-files` was replaced by `--verbose` (commit: feat: replace --show-changed-files with --verbose flag) - the old flag no longer exists in CLI or run() signature
+- `--ordered` was removed (commit: feat: always show phases, add --json flag, remove --ordered) - phases now always appear in output, there is no separate flag for them
+- `--since <ref>` flag was added (commit: feat: add --since flag for arbitrary git ref) but was not documented anywhere in the doc
+- `--json` flag was added (commit: feat: always show phases, add --json flag, remove --ordered) but was not documented
+- `--verbose` shows git context (changed files with status/line stats, commits, tags, merged branches, source-to-doc matches) which was not documented
+- The output format changed: indirect hits now show chain info (`<- via_doc`), phases always appear. The old example only showed direct/indirect lists without phases
+- The implementation diagram stopped at AffectedResult but the data-first refactor (commit: feat: add git info to verbose, refactor to data-first architecture) added _build_output_data and _print_from_data as the rendering pipeline
+- src/docsync/core/git.py is a new module (228 lines) that the affected command depends on heavily but was missing from related sources

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/architecture.md

@@ -0,0 +1,26 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/cli.py - verified subcommands (validate, affected, preview, lock, init), confirmed --json and --verbose flags exist, no --ordered flag
+- src/docsync/commands/affected.py - verified AffectedResult has 6 fields (affected_docs, direct_hits, indirect_hits, circular_refs, matches, indirect_chains), get_changed_files is imported from core/git (not a private _get_changed_files), phases always shown, --json replaces --ordered
+- src/docsync/core/git.py - verified get_changed_files, get_changed_files_detailed, get_merge_base, get_commits_in_range, get_tags_in_range, get_merged_branches_in_range functions
+- src/docsync/core/lock.py - verified Lock class, load_lock, save_lock, find_lock; imports get_current_commit from core/git
+- src/docsync/core/config.py - verified find_config traversal logic matches doc diagram
+- src/docsync/core/parser.py - verified parse_doc, RefEntry, ParsedDoc types
+- src/docsync/core/constants.py - verified DOCSYNC_DIR, CONFIG_FILENAME, LOCK_FILENAME constants
+- src/docsync/commands/validate.py - verified validate_refs, ValidateResult match doc description
+- src/docsync/commands/preview/__init__.py - verified preview module structure
+- src/docsync/commands/init.py - verified init command
+- src/docsync/commands/lock.py - verified lock subcommands (update, show)
+
+## Changes made
+- Fixed `_get_changed_files()` to `get_changed_files()` in affected command data flow diagram - function moved to core/git.py as a public function
+- Updated AffectedResult fields from `(affected, direct, indirect, circular)` to `(affected, direct, indirect, circular, matches, indirect_chains)` to reflect two new fields added during refactor
+- Replaced `--ordered` / `(by dep phases)` with `--json` / `(structured JSON)` in output diagram - --ordered was removed, phases are now always shown, and --json was added as the alternative output mode
+- Updated default output label from `(hits grouped)` to `(hits + phases)` since phases are now always included
+
+## Why it was wrong
+- `_get_changed_files()` was renamed and moved: the git diff logic was extracted from affected.py into a new core/git.py module as a public function `get_changed_files()` (commit: "refactor: consolidate git operations into core/git.py")
+- AffectedResult was extended with `matches` and `indirect_chains` fields during the data-first architecture refactor (commit: "feat: add git info to verbose, refactor to data-first architecture") to support verbose output showing which sources matched which docs and the chain of indirect propagation
+- `--ordered` flag was removed and phases are now always displayed in output (commit: "feat: always show phases, add --json flag, remove --ordered"), replaced by `--json` for structured output

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/concepts.md

@@ -0,0 +1,18 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/core/parser.py - RefEntry and ParsedDoc NamedTuples; unchanged, doc was accurate
+- src/docsync/commands/affected.py - AffectedResult now has 6 fields (added matches, indirect_chains); major refactor to data-first architecture
+- src/docsync/commands/validate.py - ValidateResult and RefError; unchanged, doc was accurate
+- src/docsync/core/config.py - Config and MetadataConfig; unchanged, doc was accurate
+- src/docsync/core/lock.py - Lock class; fields unchanged, now imports get_current_commit from core/git
+- src/docsync/core/git.py - new file; defines FileChange, CommitInfo, and git helper functions used by affected.py
+
+## Changes made
+- Added 2 missing fields to AffectedResult table: matches (dict[str, list[Path]]) and indirect_chains (dict[Path, Path])
+- Added src/docsync/core/git.py to related sources metadata (new file defining FileChange and CommitInfo types)
+
+## Why it was wrong
+- AffectedResult in src/docsync/commands/affected.py was refactored (commit "feat: add git info to verbose, refactor to data-first architecture") to include matches and indirect_chains fields. The doc only listed the original 4 fields, missing these 2 new ones that are integral to the data-first output architecture.
+- src/docsync/core/git.py was added (commit "refactor: consolidate git operations into core/git.py") as a new module defining FileChange and CommitInfo types used by affected.py. The doc's related sources did not reference this file.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/overview.md

@@ -0,0 +1,16 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/cli.py - verified commands list, entry point, CLI structure; confirmed no tree command exists
+- src/docsync/core/git.py - new file with git helper functions (FileChange, get_changed_files_detailed, get_commits_in_range, etc.); used by affected command for verbose/git info
+- src/docsync/commands/preview/__init__.py - confirmed preview command exists and delegates to server.py
+- src/docsync/commands/affected.py - confirmed verbose and json flags, git data integration
+- src/docsync/__init__.py - confirmed public API exports
+- pyproject.toml - confirmed version is 0.1.1, python >=3.9, entry point docsync.cli:main, hatch build
+
+## Changes made
+- Updated version from 0.1.0 to 0.1.1 in Package Info table
+
+## Why it was wrong
+- The version in docs/overview.md said 0.1.0 but pyproject.toml has version 0.1.1. The git context shows commits since v0.1.1 tag, confirming the version bump already happened.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/preview.md

@@ -0,0 +1,18 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/commands/preview/__init__.py - exports run from server module
+- src/docsync/commands/preview/graph.py - build_graph_data() and generate_html() functions, builds nodes/edges/levels from dependency tree
+- src/docsync/commands/preview/search.py - search_docs() function, case-insensitive content search with max 3 matches per file
+- src/docsync/commands/preview/server.py - PreviewHandler with GET/POST endpoints (/, /doc, /history, /search), run() function with default port 8420, auto browser open
+- src/docsync/commands/preview/tree.py - build_dependency_tree() returns DependencyTree(levels, circular, doc_deps)
+- src/docsync/commands/preview/template.html - full SPA with mermaid graph, folder tree, level list, search, doc viewer/editor, git history panel, SVG export, keyboard shortcuts (ArrowLeft/Right for main view, t/l for sidebar view)
+- src/docsync/core/git.py - get_file_history() and get_file_at_commit() used by server
+- docs/concepts.md - related doc, core types referenced
+
+## Changes made
+No changes needed
+
+## Why it was wrong
+The documentation accurately reflects the current source code. All features (dependency graph with SVG export, document viewer/editor, git history with version comparison, full-text search, keyboard shortcuts, bidirectional sidebar-graph selection sync), server endpoints (/, /doc GET/POST, /history, /search), configuration (--port with default 8420), implementation functions (build_graph_data, generate_html, PreviewHandler, get_file_history, get_file_at_commit, search_docs), and output messages match the implementation.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/rules.md

@@ -0,0 +1,25 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/cli.py - confirmed registered commands: validate, affected, preview, lock, init (no tree)
+- src/docsync/commands/affected.py - AffectedResult NamedTuple, new git data integration with FileChange/CommitInfo
+- src/docsync/commands/validate.py - ValidateResult and RefError are dataclasses, not NamedTuples
+- src/docsync/commands/lock.py - lock update/show subcommands
+- src/docsync/commands/init.py - init command
+- src/docsync/commands/preview/ - preview module directory (replaced standalone tree command)
+- src/docsync/commands/preview/tree.py - DependencyTree NamedTuple still exists but is internal to preview
+- src/docsync/core/git.py - new module with FileChange and CommitInfo NamedTuples
+- src/docsync/core/lock.py - Lock class, load/save functions
+- src/docsync/core/parser.py - RefEntry and ParsedDoc NamedTuples
+- src/docsync/core/config.py - Config and MetadataConfig classes
+- docs/architecture.md - related doc, confirmed tree removal
+- docs/concepts.md - related doc, type definitions
+
+## Changes made
+- Line 47: replaced `tree` with `preview` in lowercase CLI commands list
+- Lines 56-59: replaced `DependencyTree` with `FileChange` and `CommitInfo` in the NamedTuple examples list
+
+## Why it was wrong
+- The `tree` command was removed (commit: "refactor: remove tree command") and replaced by the `preview` command. The CLI commands list on line 47 still referenced `tree` instead of `preview`.
+- `DependencyTree` moved from a top-level command return type to an internal type inside `commands/preview/tree.py`. Meanwhile, `core/git.py` was added with two new NamedTuples (`FileChange`, `CommitInfo`) that are used as return types in the affected command's data pipeline. The NamedTuple examples list was outdated.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/structure.md

@@ -0,0 +1,17 @@
+## Confidence
+high
+
+## Files read
+- src/docsync/core/git.py - new module (228 lines) consolidating all git operations: diff, log, merge-base, file history, commit range queries
+- src/docsync/commands/preview/ - confirmed existing files: __init__.py, server.py, tree.py, graph.py, search.py, template.html
+- tests/ - confirmed directories: affected, validate, config, parser, preview, cli (no tree/ directory)
+- docs/repo/tooling.md - related doc, no issues
+- docs/testing.md - related doc, already lists tests/preview/
+
+## Changes made
+- Added `tests/preview/` entry to the tree structure diagram (was missing despite directory existing with test_graph.py, test_search.py, test_tree.py)
+- Added `git.py` to the "Key Directories > src/docsync/core/" bullet list with description "git operations (diff, log, merge-base)"
+
+## Why it was wrong
+- `tests/preview/` was missing from the tree diagram because it was added as part of the "refactor: preview command" commit that created `src/docsync/commands/preview/` as a new directory. The tree structure in the doc had the preview source files but not the corresponding test directory.
+- `core/git.py` was missing from the Key Directories section because it was introduced in the "refactor: consolidate git operations into core/git.py" commit after the doc was last updated. The tree diagram already had `git.py` listed (line 26) but the descriptive bullet list in the "src/docsync/core/" section did not include it.

doctrace-0.2.0/.doctrace/syncs/2026-02-17T17-17-54/testing.md

@@ -0,0 +1,23 @@
+## Confidence
+high
+
+## Files read
+- tests/affected/pure_logic/test_pure_logic.py - propagation, direct hits, find_affected_docs logic; mocks `get_changed_files`
+- tests/affected/test_scope_resolution.py - resolve_commit_ref tests for --last, --since, --since-lock, --base-branch
+- tests/affected/with_changes/test_with_changes.py - end-to-end affected with mocked changed files
+- tests/affected/with_directory_ref/test_with_directory_ref.py - directory ref matching in affected
+- tests/affected/build_indexes/test_build_indexes.py - index building from fixture docs
+- tests/cli/test_affected_flags.py - CLI argument parsing for affected command (--last, --verbose, --json, --since)
+- tests/preview/test_graph.py - graph data building and HTML generation
+- tests/preview/test_search.py - doc search by keyword, case insensitivity, line numbers
+- tests/preview/test_tree.py - dependency tree building, levels, circular detection
+- docs/repo/tooling.md - pytest configuration reference
+- docs/repo/cicd.md - CI test jobs reference
+
+## Changes made
+- Updated `tests/affected/` coverage description: added "scope resolution" (test_scope_resolution.py now tests resolve_commit_ref with --last, --since, --since-lock, --base-branch)
+- Fixed mocked function name in "Mocked change detection" section: `_get_changed_files` changed to `get_changed_files` (no underscore prefix)
+
+## Why it was wrong
+- The `test_scope_resolution.py` file was modified (+17/-6) adding new tests for `--since` and `--base-branch` scope options, but the doc's description of `tests/affected/` did not mention scope resolution at all
+- The function `_get_changed_files` was renamed to `get_changed_files` (visible in all three affected test files that mock it), making the doc's reference to the old name incorrect