dkist-processing-visp 5.2.3__tar.gz → 5.2.4__tar.gz

{dkist_processing_visp-5.2.3 → dkist_processing_visp-5.2.4}/CHANGELOG.rst

@@ -1,3 +1,18 @@
+v5.2.4 (2026-01-07)
+===================
+
+Misc
+----
+
+- Update dkist-processing-common to add a new constant for the dark number of raw frames per FPA. (`#259 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/259>`__)
+
+
+Documentation
+-------------
+
+- Update documentation to reflect that polcal frames are now reduced using the darks and gains taken as part of the polcal sequence. (`#256 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/256>`__)
+
+
 v5.2.3 (2025-12-22)
 ===================
 

{dkist_processing_visp-5.2.3 → dkist_processing_visp-5.2.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: dkist-processing-visp
-Version: 5.2.3
+Version: 5.2.4
 Summary: Science processing code for the ViSP instrument on DKIST
 Author-email: NSO / AURA <dkistdc@nso.edu>
 License: BSD-3-Clause
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{dkist_processing_visp-5.2.3 → dkist_processing_visp-5.2.4}/dkist_processing_visp.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: dkist-processing-visp
-Version: 5.2.3
+Version: 5.2.4
 Summary: Science processing code for the ViSP instrument on DKIST
 Author-email: NSO / AURA <dkistdc@nso.edu>
 License: BSD-3-Clause
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 Classifier: Programming Language :: Python :: 3.12
 Requires-Python: >=3.12
 Description-Content-Type: text/x-rst
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{dkist_processing_visp-5.2.3 → dkist_processing_visp-5.2.4}/dkist_processing_visp.egg-info/requires.txt

@@ -1,4 +1,4 @@
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 aiosmtplib==5.0.0
 alembic==1.17.2
 amqp==5.3.1
 annotated-types==0.7.0
-anyio==4.12.0
+anyio==4.12.1
 apache-airflow==2.11.0
-apache-airflow-providers-celery==3.14.1
-apache-airflow-providers-common-compat==1.10.1
+apache-airflow-providers-celery==3.15.0
+apache-airflow-providers-common-compat==1.11.0
 apache-airflow-providers-common-io==1.7.0
-apache-airflow-providers-common-sql==1.30.1
+apache-airflow-providers-common-sql==1.30.2
 apache-airflow-providers-fab==1.5.3
 apache-airflow-providers-ftp==3.14.0
-apache-airflow-providers-http==5.6.1
-apache-airflow-providers-imap==3.10.1
+apache-airflow-providers-http==5.6.2
+apache-airflow-providers-imap==3.10.2
 apache-airflow-providers-postgres==6.5.1
 apache-airflow-providers-smtp==2.4.1
 apache-airflow-providers-sqlite==4.2.0
@@ -86,17 +86,17 @@ asdf_transform_schemas==0.6.0
 asgiref==3.11.0
 asteval==1.0.8
 astropy==7.0.2
-astropy-iers-data==0.2025.12.22.0.40.30
+astropy-iers-data==0.2026.1.5.0.43.43
 asyncpg==0.31.0
 attrs==25.4.0
 babel==2.17.0
 billiard==4.2.4
 blinker==1.9.0
-boto3==1.42.14
-botocore==1.42.14
+boto3==1.42.24
+botocore==1.42.24
 cachelib==0.13.0
-celery==5.6.0
-certifi==2025.11.12
+celery==5.6.2
+certifi==2026.1.4
 cffi==2.0.0
 charset-normalizer==3.4.4
 click==8.3.1
@@ -116,17 +116,16 @@ dacite==1.9.2
 decorator==5.2.1
 dill==0.4.0
 dkist-header-validator==5.2.1
-dkist-processing-common==11.9.2
+dkist-processing-common==11.9.3
 dkist-processing-core==6.0.1
 dkist-processing-math==2.2.1
 dkist-processing-pac==3.1.1
-dkist-processing-visp==5.2.3
+dkist-processing-visp==5.2.4
 dkist-service-configuration==4.1.13
 dkist-spectral-lines==3.0.0
 dkist_fits_specifications==4.19.0
 dnspython==2.8.0
 email-validator==2.3.0
-exceptiongroup==1.3.1
 fastjsonschema==2.21.2
 flower==2.0.1
 fonttools==4.61.1
@@ -136,6 +135,7 @@ globus-sdk==4.3.0
 google-re2==1.1.20251105
 googleapis-common-protos==1.72.0
 gqlclient==1.2.3
+greenlet==3.3.0
 grpcio==1.76.0
 gunicorn==23.0.0
 h11==0.16.0
@@ -149,11 +149,11 @@ inflection==0.5.1
 itsdangerous==2.2.0
 jmespath==1.0.1
 joblib==1.5.3
-jsonschema==4.25.1
+jsonschema==4.26.0
 jsonschema-specifications==2025.9.1
 jupyter_core==5.9.1
 kiwisolver==1.4.9
-kombu==5.6.1
+kombu==5.6.2
 lazy-object-proxy==1.12.0
 lazy_loader==0.4
 limits==5.6.0
@@ -205,7 +205,7 @@ packaging==25.0
 pandas==2.3.3
 parfive==2.2.0
 pathlib_abc==0.5.2
-pathspec==0.12.1
+pathspec==1.0.1
 pendulum==3.1.0
 pika==1.3.2
 pillow==10.4.0
@@ -219,14 +219,14 @@ prometheus_client==0.23.1
 prompt_toolkit==3.0.52
 propcache==0.4.1
 protobuf==6.33.2
-psutil==7.1.3
+psutil==7.2.1
 psycopg2-binary==2.9.11
 pycparser==2.23
 pydantic==2.12.5
 pydantic-settings==2.12.0
 pydantic_core==2.41.5
 pyerfa==2.0.1.5
-pyparsing==3.3.0
+pyparsing==3.3.1
 python-daemon==3.1.2
 python-dateutil==2.9.0.post0
 python-dotenv==1.2.1
@@ -255,7 +255,7 @@ sunpy==6.1.1
 tabulate==0.9.0
 talus==1.3.4
 tenacity==8.5.0
-termcolor==3.2.0
+termcolor==3.3.0
 text-unidecode==1.3
 threadpoolctl==3.6.0
 tifffile==2025.12.20
@@ -269,7 +269,7 @@ tzlocal==5.3.1
 uc-micro-py==1.0.3
 uncertainties==3.2.3
 universal_pathlib==0.3.7
-urllib3==2.6.2
+urllib3==2.6.3
 vine==5.1.0
 voluptuous==0.16.0
 wcwidth==0.2.14

{dkist_processing_visp-5.2.3 → dkist_processing_visp-5.2.4}/docs/polarization_calibration.rst

@@ -40,8 +40,9 @@ Algorithm Detail
 
 The general algorithm is:
 
-#. Correct input PolCal data with dark, :doc:`background <background_light>`, :doc:`gain </gain_correction>`, and
-   :doc:`geometric </geometric>` calibrations.
+#. Generate polcal dark and gain frames.
+
+#. Correct input PolCal data with darks and gains taken as part of the instrument polarization sequence, as well as any :doc:`background light <background_light>` correction, if applicable.
 
 #. Bin "global" and "local" sets of polcal data.
 
@@ -51,11 +52,29 @@ The general algorithm is:
 
 #. Up-sample the binned demodulation matrices to span the full ViSP FOV.
 
-Calibrate Input PoCal Data
-^^^^^^^^^^^^^^^^^^^^^^^^^^
+Generate PolCal Dark and Gain Frames
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+PolCal data are reduced using darks and gains taken as part of the PolCal sequence.
+
+This approach ensures that PolCal data are always reducible, even in cases where the exposure times of observe darks and PolCal darks differ due to experimental setup errors.
+For consistency with other spectro-polarimetric instruments, it is important that the observe darks and PolCal darks have matching
+exposure times (or at least matching frame and single frame exposure times). Using PolCal darks guarantees that the PolCal data can
+always be properly reduced, regardless of such discrepancies.
+
+
+For gain correction, the average of the dark-corrected
+'clear' PolCal frames is used. This change ensures that spectral line signatures are largely removed from the data, preventing bias
+in the median value calculated across the spectral axis. The same average clear frame is applied to all PolCal data through division,
+and to all modulation states identically, preserving relative flux changes between states. With this approach, a separate gain
+array is not necessary.
+
+
+Calibrate Input PolCal Data
+^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
-PoCal data are calibration in exactly the same way as input science data. They first have dark and background signals
-removed, then are normalized by a gain image before finally having their :doc:`geometric </geometric>` distortions
+PoCal data first have PolCal dark and background signals
+removed, then are normalized by the average PolCal gain image before finally having their :doc:`geometric </geometric>` distortions
 (spectral rotation, x/y offset, and spectral curvature) removed.
 
 Bin PolCal Data

{dkist_processing_visp-5.2.3 → dkist_processing_visp-5.2.4}/pyproject.toml

@@ -9,8 +9,8 @@ find = {}
 
 [tool.dkist-dev-tools]
 # Most recently frozen version by dkist-dev-tools
-version = "5.2.3"
-date = 2025-12-22T13:19:48.235736
+version = "5.2.4"
+date = 2026-01-07T16:25:20.703416
 
 [project]
 dynamic = ["version"]
@@ -26,7 +26,7 @@ classifiers = [
   "Programming Language :: Python :: 3.12",
 ]
 dependencies = [
-  "dkist-processing-common == 11.9.2",
+  "dkist-processing-common == 11.9.3",
   "dkist-processing-math == 2.2.1",
   "dkist-processing-pac == 3.1.1",
   "dkist-header-validator == 5.2.1",
@@ -121,22 +121,22 @@ frozen = [
     "Werkzeug == 2.2.3",
     "aioftp == 0.27.2",
     "aiohappyeyeballs == 2.6.1",
-    "aiohttp == 3.13.2",
+    "aiohttp == 3.13.3",
     "aiosignal == 1.4.0",
     "aiosmtplib == 5.0.0",
     "alembic == 1.17.2",
     "amqp == 5.3.1",
     "annotated-types == 0.7.0",
-    "anyio == 4.12.0",
+    "anyio == 4.12.1",
     "apache-airflow == 2.11.0",
-    "apache-airflow-providers-celery == 3.14.1",
-    "apache-airflow-providers-common-compat == 1.10.1",
+    "apache-airflow-providers-celery == 3.15.0",
+    "apache-airflow-providers-common-compat == 1.11.0",
     "apache-airflow-providers-common-io == 1.7.0",
-    "apache-airflow-providers-common-sql == 1.30.1",
+    "apache-airflow-providers-common-sql == 1.30.2",
     "apache-airflow-providers-fab == 1.5.3",
     "apache-airflow-providers-ftp == 3.14.0",
-    "apache-airflow-providers-http == 5.6.1",
-    "apache-airflow-providers-imap == 3.10.1",
+    "apache-airflow-providers-http == 5.6.2",
+    "apache-airflow-providers-imap == 3.10.2",
     "apache-airflow-providers-postgres == 6.5.1",
     "apache-airflow-providers-smtp == 2.4.1",
     "apache-airflow-providers-sqlite == 4.2.0",
@@ -148,17 +148,17 @@ frozen = [
     "asgiref == 3.11.0",
     "asteval == 1.0.8",
     "astropy == 7.0.2",
-    "astropy-iers-data == 0.2025.12.22.0.40.30",
+    "astropy-iers-data == 0.2026.1.5.0.43.43",
     "asyncpg == 0.31.0",
     "attrs == 25.4.0",
     "babel == 2.17.0",
     "billiard == 4.2.4",
     "blinker == 1.9.0",
-    "boto3 == 1.42.14",
-    "botocore == 1.42.14",
+    "boto3 == 1.42.24",
+    "botocore == 1.42.24",
     "cachelib == 0.13.0",
-    "celery == 5.6.0",
-    "certifi == 2025.11.12",
+    "celery == 5.6.2",
+    "certifi == 2026.1.4",
     "cffi == 2.0.0",
     "charset-normalizer == 3.4.4",
     "click == 8.3.1",
@@ -178,17 +178,16 @@ frozen = [
     "decorator == 5.2.1",
     "dill == 0.4.0",
     "dkist-header-validator == 5.2.1",
-    "dkist-processing-common == 11.9.2",
+    "dkist-processing-common == 11.9.3",
     "dkist-processing-core == 6.0.1",
     "dkist-processing-math == 2.2.1",
     "dkist-processing-pac == 3.1.1",
-    "dkist-processing-visp == 5.2.3",
+    "dkist-processing-visp == 5.2.4",
     "dkist-service-configuration == 4.1.13",
     "dkist-spectral-lines == 3.0.0",
     "dkist_fits_specifications == 4.19.0",
     "dnspython == 2.8.0",
     "email-validator == 2.3.0",
-    "exceptiongroup == 1.3.1",
     "fastjsonschema == 2.21.2",
     "flower == 2.0.1",
     "fonttools == 4.61.1",
@@ -198,6 +197,7 @@ frozen = [
     "google-re2 == 1.1.20251105",
     "googleapis-common-protos == 1.72.0",
     "gqlclient == 1.2.3",
+    "greenlet == 3.3.0",
     "grpcio == 1.76.0",
     "gunicorn == 23.0.0",
     "h11 == 0.16.0",
@@ -211,11 +211,11 @@ frozen = [
     "itsdangerous == 2.2.0",
     "jmespath == 1.0.1",
     "joblib == 1.5.3",
-    "jsonschema == 4.25.1",
+    "jsonschema == 4.26.0",
     "jsonschema-specifications == 2025.9.1",
     "jupyter_core == 5.9.1",
     "kiwisolver == 1.4.9",
-    "kombu == 5.6.1",
+    "kombu == 5.6.2",
     "lazy-object-proxy == 1.12.0",
     "lazy_loader == 0.4",
     "limits == 5.6.0",
@@ -267,7 +267,7 @@ frozen = [
     "pandas == 2.3.3",
     "parfive == 2.2.0",
     "pathlib_abc == 0.5.2",
-    "pathspec == 0.12.1",
+    "pathspec == 1.0.1",
     "pendulum == 3.1.0",
     "pika == 1.3.2",
     "pillow == 10.4.0",
@@ -281,14 +281,14 @@ frozen = [
     "prompt_toolkit == 3.0.52",
     "propcache == 0.4.1",
     "protobuf == 6.33.2",
-    "psutil == 7.1.3",
+    "psutil == 7.2.1",
     "psycopg2-binary == 2.9.11",
     "pycparser == 2.23",
     "pydantic == 2.12.5",
     "pydantic-settings == 2.12.0",
     "pydantic_core == 2.41.5",
     "pyerfa == 2.0.1.5",
-    "pyparsing == 3.3.0",
+    "pyparsing == 3.3.1",
     "python-daemon == 3.1.2",
     "python-dateutil == 2.9.0.post0",
     "python-dotenv == 1.2.1",
@@ -317,7 +317,7 @@ frozen = [
     "tabulate == 0.9.0",
     "talus == 1.3.4",
     "tenacity == 8.5.0",
-    "termcolor == 3.2.0",
+    "termcolor == 3.3.0",
     "text-unidecode == 1.3",
     "threadpoolctl == 3.6.0",
     "tifffile == 2025.12.20",
@@ -331,7 +331,7 @@ frozen = [
     "uc-micro-py == 1.0.3",
     "uncertainties == 3.2.3",
     "universal_pathlib == 0.3.7",
-    "urllib3 == 2.6.2",
+    "urllib3 == 2.6.3",
     "vine == 5.1.0",
     "voluptuous == 0.16.0",
     "wcwidth == 0.2.14",