dkist-processing-visp 4.0.0__tar.gz → 5.2.5__tar.gz

{dkist_processing_visp-4.0.0 → dkist_processing_visp-5.2.5}/CHANGELOG.rst

@@ -1,3 +1,163 @@
+v5.2.5 (2026-01-09)
+===================
+
+Misc
+----
+
+- Update dkist-fits-specifications to add `L1_EXTRA` as a valid value for the `PROCTYPE` header key. (`#260 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/260>`__)
+
+
+v5.2.4 (2026-01-07)
+===================
+
+Misc
+----
+
+- Update dkist-processing-common to add a new constant for the dark number of raw frames per FPA. (`#259 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/259>`__)
+
+
+Documentation
+-------------
+
+- Update documentation to reflect that polcal frames are now reduced using the darks and gains taken as part of the polcal sequence. (`#256 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/256>`__)
+
+
+v5.2.3 (2025-12-22)
+===================
+
+Misc
+----
+
+- Change the default URL of the solar and telluric atlases for unit tests. (`#258 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/258>`__)
+
+Bugfixes
+--------
+
+- Update dkist-processing-common to raise an error when movie files are missing. (`#257 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/257>`__)
+
+
+v5.2.2 (2025-12-17)
+===================
+
+Bugfixes
+--------
+
+- Normalize atlas and input spectrum when computing an initial CRVAL guess in the `WavelengthCalibration` task. This fixes
+  failing fits caused by very poor initial guesses caused by large continuum offsets. (`#255 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/255>`__)
+
+
+Misc
+----
+
+- Move the `estimate_relative_continuum_level` method from `SolarCalibration` class to be a module-level function in
+  "wavelength_calibration.py" so it can be used by both the `SolarCalibration` and `WavelengthCalibration` tasks. (`#255 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/255>`__)
+- Import the `WavelengthCalibration` task into the top-level `tasks` package and use that import path in workflow definitions. (`#255 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/255>`__)
+
+
+Documentation
+-------------
+
+- Fix issue that prevented module-level functions in the wavelength calibration module from rendering in API docs. (`#255 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/255>`__)
+
+
+v5.2.1 (2025-12-16)
+===================
+
+Misc
+----
+
+- Update dkist-fits-specifications to enable use of dataset extras schemas. (`#254 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/254>`__)
+
+
+v5.2.0 (2025-12-12)
+===================
+
+Features
+--------
+
+- Add the WavelengthCalibration task, which computes an absolute wavelength solution that is encoded in L1 headers. (`#234 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/234>`__)
+
+
+Bugfixes
+--------
+
+- The modification of CRPIX1 and CRPIX2 to account for beam-overlap trimming is now correct for some early (OCP1) ViSP
+  data that had their WCS axes switched in the headers. (`#234 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/234>`__)
+
+
+Misc
+----
+
+- Update logging lines to print `np.int*` types as plain ints instead of the `__repr__`, which shows the full type. (`#253 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/253>`__)
+
+
+Documentation
+-------------
+
+- Add online documentation page for new WavelengthCalibration task. (`#234 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/234>`__)
+
+
+v5.1.2 (2025-12-08)
+===================
+
+Features
+--------
+
+- Store quality data in object store and revise the workflow so that VispAssembleQualityData precedes the TransferL1Data task. (`#251 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/251>`__)
+
+
+v5.1.1 (2025-12-05)
+===================
+
+Misc
+----
+
+- Update dkist-processing-common to 11.9.0 to take advantage of globus account pools for inbound and outbound transfers. (`#252 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/252>`__)
+
+
+v5.1.0 (2025-12-03)
+===================
+
+Misc
+----
+
+- Update workflows to remove `InstrumentPolarizationCalibration`'s dependency on `SolarCalibration`. These two tasks can
+  now run in parallel. (`#248 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/248>`__)
+
+
+v5.0.0 (2025-12-02)
+===================
+
+Features
+--------
+
+- Only compute a single lamp gain for each beam. In the past a single map gain was also computed for each modulation state. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+- Add quality report metrics that show the quality of the vignette estimation in the Solar Gain tasks. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+- Update the Solar Gain task to measure vignetting signal, compute a single gain for each beam (as opposed to for each beam and modulator state),
+  and stop applying residual spectral shifts to the characteristic spectra before removing from the input gain array.
+  See the `Science Changelog <https://docs.dkist.nso.edu/projects/visp/en/stable/scientific_changelog.html>`_ and
+  `gain algorithm docs <https://docs.dkist.nso.edu/projects/visp/en/stable/gain_correction.html>`_ for more information. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+- Add Buds to parse the spectrograph setup into pipeline constants to be used when fitting a solar atlas. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+
+
+Misc
+----
+
+- Remove the `LineZonesMixin` and move its methods directly to the Geometric calibration task, which is now the only task that uses them. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+- Rename the ``solar_spectral_avg_window`` to ``solar_spatial_median_filter_width_px`` to more accurately capture what it does. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+- Rename all line-zone parameters to be "geo*" parameters instead of "solar*" parameters. These parameters are now only used in the
+  Geometric calibration task. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+
+
+Documentation
+-------------
+
+- Update the online doc page for `gain calibration <https://docs.dkist.nso.edu/projects/visp/en/stable/gain_correction.html>`_
+  to reflect the updates to the Solar Gain task. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+- Add intersphinx mappings for `lmfit <https://lmfit.github.io/lmfit-py/>`_ and `scikit-learn <https://scikit-learn.org/stable/>`_
+  for linking bliss. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+
+
 v4.0.0 (2025-11-12)
 ===================
 

{dkist_processing_visp-4.0.0 → dkist_processing_visp-5.2.5}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: dkist-processing-visp
-Version: 4.0.0
+Version: 5.2.5
 Summary: Science processing code for the ViSP instrument on DKIST
 Author-email: NSO / AURA <dkistdc@nso.edu>
 License: BSD-3-Clause
@@ -13,13 +13,14 @@ Classifier: Programming Language :: Python :: 3
 Classifier: Programming Language :: Python :: 3.12
 Requires-Python: >=3.12
 Description-Content-Type: text/x-rst
-Requires-Dist: dkist-processing-common==11.8.0
+Requires-Dist: dkist-processing-common==11.9.3
 Requires-Dist: dkist-processing-math==2.2.1
 Requires-Dist: dkist-processing-pac==3.1.1
 Requires-Dist: dkist-header-validator==5.2.1
-Requires-Dist: dkist-fits-specifications==4.17.0
-Requires-Dist: dkist-service-configuration==4.1.7
+Requires-Dist: dkist-fits-specifications==4.20.0
+Requires-Dist: dkist-service-configuration==4.1.13
 Requires-Dist: dkist-spectral-lines==3.0.0
+Requires-Dist: solar-wavelength-calibration==2.0.0
 Requires-Dist: astropy==7.0.2
 Requires-Dist: numpy==2.2.5
 Requires-Dist: sunpy==6.1.1
@@ -29,6 +30,7 @@ Requires-Dist: scikit-learn==1.6.1
 Requires-Dist: peakutils==1.3.5
 Requires-Dist: Pillow==10.4.0
 Requires-Dist: moviepy==2.1.2
+Requires-Dist: solar-wavelength-calibration==2.0.0
 Provides-Extra: test
 Requires-Dist: pytest; extra == "test"
 Requires-Dist: pytest-cov; extra == "test"
@@ -43,10 +45,10 @@ Requires-Dist: dkist-processing-visp[asdf]; extra == "test"
 Requires-Dist: dkist-processing-visp[quality]; extra == "test"
 Provides-Extra: inventory
 Requires-Dist: dkist-processing-common[inventory]; extra == "inventory"
-Requires-Dist: dkist-inventory==1.11.1; extra == "inventory"
+Requires-Dist: dkist-inventory==1.11.2; extra == "inventory"
 Provides-Extra: asdf
 Requires-Dist: dkist-processing-common[asdf]; extra == "asdf"
-Requires-Dist: dkist-inventory[asdf]==1.11.1; extra == "asdf"
+Requires-Dist: dkist-inventory[asdf]==1.11.2; extra == "asdf"
 Provides-Extra: quality
 Requires-Dist: dkist-quality==2.0.0; extra == "quality"
 Provides-Extra: grogu
@@ -86,52 +88,52 @@ Requires-Dist: PyYAML==6.0.3; extra == "frozen"
 Requires-Dist: Pygments==2.19.2; extra == "frozen"
 Requires-Dist: SQLAlchemy==1.4.54; extra == "frozen"
 Requires-Dist: SQLAlchemy-JSONField==1.0.2; extra == "frozen"
-Requires-Dist: SQLAlchemy-Utils==0.42.0; extra == "frozen"
+Requires-Dist: SQLAlchemy-Utils==0.42.1; extra == "frozen"
 Requires-Dist: WTForms==3.2.1; extra == "frozen"
 Requires-Dist: Werkzeug==2.2.3; extra == "frozen"
 Requires-Dist: aioftp==0.27.2; extra == "frozen"
 Requires-Dist: aiohappyeyeballs==2.6.1; extra == "frozen"
-Requires-Dist: aiohttp==3.13.2; extra == "frozen"
+Requires-Dist: aiohttp==3.13.3; extra == "frozen"
 Requires-Dist: aiosignal==1.4.0; extra == "frozen"
 Requires-Dist: aiosmtplib==5.0.0; extra == "frozen"
-Requires-Dist: alembic==1.17.1; extra == "frozen"
+Requires-Dist: alembic==1.17.2; extra == "frozen"
 Requires-Dist: amqp==5.3.1; extra == "frozen"
 Requires-Dist: annotated-types==0.7.0; extra == "frozen"
-Requires-Dist: anyio==4.11.0; extra == "frozen"
+Requires-Dist: anyio==4.12.1; extra == "frozen"
 Requires-Dist: apache-airflow==2.11.0; extra == "frozen"
-Requires-Dist: apache-airflow-providers-celery==3.10.0; extra == "frozen"
-Requires-Dist: apache-airflow-providers-common-compat==1.8.0; extra == "frozen"
-Requires-Dist: apache-airflow-providers-common-io==1.6.4; extra == "frozen"
-Requires-Dist: apache-airflow-providers-common-sql==1.28.2; extra == "frozen"
+Requires-Dist: apache-airflow-providers-celery==3.15.0; extra == "frozen"
+Requires-Dist: apache-airflow-providers-common-compat==1.11.0; extra == "frozen"
+Requires-Dist: apache-airflow-providers-common-io==1.7.0; extra == "frozen"
+Requires-Dist: apache-airflow-providers-common-sql==1.30.2; extra == "frozen"
 Requires-Dist: apache-airflow-providers-fab==1.5.3; extra == "frozen"
-Requires-Dist: apache-airflow-providers-ftp==3.13.2; extra == "frozen"
-Requires-Dist: apache-airflow-providers-http==5.4.0; extra == "frozen"
-Requires-Dist: apache-airflow-providers-imap==3.9.3; extra == "frozen"
-Requires-Dist: apache-airflow-providers-postgres==6.4.0; extra == "frozen"
-Requires-Dist: apache-airflow-providers-smtp==2.3.1; extra == "frozen"
-Requires-Dist: apache-airflow-providers-sqlite==4.1.2; extra == "frozen"
-Requires-Dist: apispec==6.8.4; extra == "frozen"
+Requires-Dist: apache-airflow-providers-ftp==3.14.0; extra == "frozen"
+Requires-Dist: apache-airflow-providers-http==5.6.2; extra == "frozen"
+Requires-Dist: apache-airflow-providers-imap==3.10.2; extra == "frozen"
+Requires-Dist: apache-airflow-providers-postgres==6.5.1; extra == "frozen"
+Requires-Dist: apache-airflow-providers-smtp==2.4.1; extra == "frozen"
+Requires-Dist: apache-airflow-providers-sqlite==4.2.0; extra == "frozen"
+Requires-Dist: apispec==6.9.0; extra == "frozen"
 Requires-Dist: argcomplete==3.6.3; extra == "frozen"
 Requires-Dist: asdf==3.5.0; extra == "frozen"
 Requires-Dist: asdf_standard==1.4.0; extra == "frozen"
 Requires-Dist: asdf_transform_schemas==0.6.0; extra == "frozen"
-Requires-Dist: asgiref==3.10.0; extra == "frozen"
-Requires-Dist: asteval==1.0.7; extra == "frozen"
+Requires-Dist: asgiref==3.11.0; extra == "frozen"
+Requires-Dist: asteval==1.0.8; extra == "frozen"
 Requires-Dist: astropy==7.0.2; extra == "frozen"
-Requires-Dist: astropy-iers-data==0.2025.11.10.0.38.31; extra == "frozen"
-Requires-Dist: asyncpg==0.30.0; extra == "frozen"
+Requires-Dist: astropy-iers-data==0.2026.1.5.0.43.43; extra == "frozen"
+Requires-Dist: asyncpg==0.31.0; extra == "frozen"
 Requires-Dist: attrs==25.4.0; extra == "frozen"
 Requires-Dist: babel==2.17.0; extra == "frozen"
-Requires-Dist: billiard==4.2.2; extra == "frozen"
+Requires-Dist: billiard==4.2.4; extra == "frozen"
 Requires-Dist: blinker==1.9.0; extra == "frozen"
-Requires-Dist: boto3==1.40.71; extra == "frozen"
-Requires-Dist: botocore==1.40.71; extra == "frozen"
+Requires-Dist: boto3==1.42.24; extra == "frozen"
+Requires-Dist: botocore==1.42.24; extra == "frozen"
 Requires-Dist: cachelib==0.13.0; extra == "frozen"
-Requires-Dist: celery==5.3.1; extra == "frozen"
-Requires-Dist: certifi==2025.11.12; extra == "frozen"
+Requires-Dist: celery==5.6.2; extra == "frozen"
+Requires-Dist: certifi==2026.1.4; extra == "frozen"
 Requires-Dist: cffi==2.0.0; extra == "frozen"
 Requires-Dist: charset-normalizer==3.4.4; extra == "frozen"
-Requires-Dist: click==8.3.0; extra == "frozen"
+Requires-Dist: click==8.3.1; extra == "frozen"
 Requires-Dist: click-didyoumean==0.3.1; extra == "frozen"
 Requires-Dist: click-plugins==1.1.1.2; extra == "frozen"
 Requires-Dist: click-repl==0.3.0; extra == "frozen"
@@ -148,22 +150,22 @@ Requires-Dist: dacite==1.9.2; extra == "frozen"
 Requires-Dist: decorator==5.2.1; extra == "frozen"
 Requires-Dist: dill==0.4.0; extra == "frozen"
 Requires-Dist: dkist-header-validator==5.2.1; extra == "frozen"
-Requires-Dist: dkist-processing-common==11.8.0; extra == "frozen"
-Requires-Dist: dkist-processing-core==6.0.0; extra == "frozen"
+Requires-Dist: dkist-processing-common==11.9.3; extra == "frozen"
+Requires-Dist: dkist-processing-core==6.0.1; extra == "frozen"
 Requires-Dist: dkist-processing-math==2.2.1; extra == "frozen"
 Requires-Dist: dkist-processing-pac==3.1.1; extra == "frozen"
-Requires-Dist: dkist-processing-visp==4.0.0; extra == "frozen"
-Requires-Dist: dkist-service-configuration==4.1.7; extra == "frozen"
+Requires-Dist: dkist-processing-visp==5.2.5; extra == "frozen"
+Requires-Dist: dkist-service-configuration==4.1.13; extra == "frozen"
 Requires-Dist: dkist-spectral-lines==3.0.0; extra == "frozen"
-Requires-Dist: dkist_fits_specifications==4.17.0; extra == "frozen"
+Requires-Dist: dkist_fits_specifications==4.20.0; extra == "frozen"
 Requires-Dist: dnspython==2.8.0; extra == "frozen"
 Requires-Dist: email-validator==2.3.0; extra == "frozen"
 Requires-Dist: fastjsonschema==2.21.2; extra == "frozen"
 Requires-Dist: flower==2.0.1; extra == "frozen"
-Requires-Dist: fonttools==4.60.1; extra == "frozen"
+Requires-Dist: fonttools==4.61.1; extra == "frozen"
 Requires-Dist: frozenlist==1.8.0; extra == "frozen"
-Requires-Dist: fsspec==2025.10.0; extra == "frozen"
-Requires-Dist: globus-sdk==3.65.0; extra == "frozen"
+Requires-Dist: fsspec==2026.1.0; extra == "frozen"
+Requires-Dist: globus-sdk==4.3.0; extra == "frozen"
 Requires-Dist: google-re2==1.1.20251105; extra == "frozen"
 Requires-Dist: googleapis-common-protos==1.72.0; extra == "frozen"
 Requires-Dist: gqlclient==1.2.3; extra == "frozen"
@@ -172,19 +174,19 @@ Requires-Dist: gunicorn==23.0.0; extra == "frozen"
 Requires-Dist: h11==0.16.0; extra == "frozen"
 Requires-Dist: httpcore==1.0.9; extra == "frozen"
 Requires-Dist: httpx==0.28.1; extra == "frozen"
-Requires-Dist: humanize==4.14.0; extra == "frozen"
+Requires-Dist: humanize==4.15.0; extra == "frozen"
 Requires-Dist: idna==3.11; extra == "frozen"
 Requires-Dist: imageio-ffmpeg==0.6.0; extra == "frozen"
-Requires-Dist: importlib_metadata==8.7.0; extra == "frozen"
+Requires-Dist: importlib_metadata==8.7.1; extra == "frozen"
 Requires-Dist: inflection==0.5.1; extra == "frozen"
 Requires-Dist: itsdangerous==2.2.0; extra == "frozen"
 Requires-Dist: jmespath==1.0.1; extra == "frozen"
-Requires-Dist: joblib==1.5.2; extra == "frozen"
-Requires-Dist: jsonschema==4.25.1; extra == "frozen"
+Requires-Dist: joblib==1.5.3; extra == "frozen"
+Requires-Dist: jsonschema==4.26.0; extra == "frozen"
 Requires-Dist: jsonschema-specifications==2025.9.1; extra == "frozen"
 Requires-Dist: jupyter_core==5.9.1; extra == "frozen"
 Requires-Dist: kiwisolver==1.4.9; extra == "frozen"
-Requires-Dist: kombu==5.6.0; extra == "frozen"
+Requires-Dist: kombu==5.6.2; extra == "frozen"
 Requires-Dist: lazy-object-proxy==1.12.0; extra == "frozen"
 Requires-Dist: lazy_loader==0.4; extra == "frozen"
 Requires-Dist: limits==5.6.0; extra == "frozen"
@@ -193,10 +195,10 @@ Requires-Dist: lmfit==1.3.4; extra == "frozen"
 Requires-Dist: lockfile==0.12.2; extra == "frozen"
 Requires-Dist: loguru==0.7.3; extra == "frozen"
 Requires-Dist: markdown-it-py==4.0.0; extra == "frozen"
-Requires-Dist: marshmallow==3.26.1; extra == "frozen"
+Requires-Dist: marshmallow==3.26.2; extra == "frozen"
 Requires-Dist: marshmallow-oneofschema==3.2.0; extra == "frozen"
 Requires-Dist: marshmallow-sqlalchemy==0.28.2; extra == "frozen"
-Requires-Dist: matplotlib==3.10.7; extra == "frozen"
+Requires-Dist: matplotlib==3.10.8; extra == "frozen"
 Requires-Dist: mdit-py-plugins==0.5.0; extra == "frozen"
 Requires-Dist: mdurl==0.1.2; extra == "frozen"
 Requires-Dist: methodtools==0.4.7; extra == "frozen"
@@ -204,44 +206,44 @@ Requires-Dist: more-itertools==10.8.0; extra == "frozen"
 Requires-Dist: moviepy==2.1.2; extra == "frozen"
 Requires-Dist: multidict==6.7.0; extra == "frozen"
 Requires-Dist: nbformat==5.10.4; extra == "frozen"
-Requires-Dist: networkx==3.5; extra == "frozen"
+Requires-Dist: networkx==3.6.1; extra == "frozen"
 Requires-Dist: numpy==2.2.5; extra == "frozen"
 Requires-Dist: object-clerk==1.0.0; extra == "frozen"
-Requires-Dist: opentelemetry-api==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-exporter-otlp==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-exporter-otlp-proto-common==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-exporter-otlp-proto-grpc==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-exporter-otlp-proto-http==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-aiohttp-client==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-asgi==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-botocore==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-celery==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-dbapi==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-fastapi==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-pika==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-psycopg2==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-pymongo==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-redis==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-requests==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-sqlalchemy==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-instrumentation-system-metrics==0.59b0; extra == "frozen"
+Requires-Dist: opentelemetry-api==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-exporter-otlp==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-exporter-otlp-proto-common==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-exporter-otlp-proto-grpc==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-exporter-otlp-proto-http==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-aiohttp-client==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-asgi==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-botocore==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-celery==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-dbapi==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-fastapi==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-pika==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-psycopg2==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-pymongo==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-redis==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-requests==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-sqlalchemy==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-instrumentation-system-metrics==0.60b1; extra == "frozen"
 Requires-Dist: opentelemetry-propagator-aws-xray==1.0.2; extra == "frozen"
-Requires-Dist: opentelemetry-proto==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-sdk==1.38.0; extra == "frozen"
-Requires-Dist: opentelemetry-semantic-conventions==0.59b0; extra == "frozen"
-Requires-Dist: opentelemetry-util-http==0.59b0; extra == "frozen"
+Requires-Dist: opentelemetry-proto==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-sdk==1.39.1; extra == "frozen"
+Requires-Dist: opentelemetry-semantic-conventions==0.60b1; extra == "frozen"
+Requires-Dist: opentelemetry-util-http==0.60b1; extra == "frozen"
 Requires-Dist: ordered-set==4.1.0; extra == "frozen"
 Requires-Dist: packaging==25.0; extra == "frozen"
 Requires-Dist: pandas==2.3.3; extra == "frozen"
 Requires-Dist: parfive==2.2.0; extra == "frozen"
 Requires-Dist: pathlib_abc==0.5.2; extra == "frozen"
-Requires-Dist: pathspec==0.12.1; extra == "frozen"
+Requires-Dist: pathspec==1.0.3; extra == "frozen"
 Requires-Dist: pendulum==3.1.0; extra == "frozen"
 Requires-Dist: pika==1.3.2; extra == "frozen"
 Requires-Dist: pillow==10.4.0; extra == "frozen"
 Requires-Dist: pip==25.3; extra == "frozen"
-Requires-Dist: platformdirs==4.5.0; extra == "frozen"
+Requires-Dist: platformdirs==4.5.1; extra == "frozen"
 Requires-Dist: pluggy==1.6.0; extra == "frozen"
 Requires-Dist: pooch==1.8.2; extra == "frozen"
 Requires-Dist: prison==0.2.1; extra == "frozen"
@@ -249,15 +251,15 @@ Requires-Dist: proglog==0.1.12; extra == "frozen"
 Requires-Dist: prometheus_client==0.23.1; extra == "frozen"
 Requires-Dist: prompt_toolkit==3.0.52; extra == "frozen"
 Requires-Dist: propcache==0.4.1; extra == "frozen"
-Requires-Dist: protobuf==6.33.0; extra == "frozen"
-Requires-Dist: psutil==7.1.3; extra == "frozen"
+Requires-Dist: protobuf==6.33.2; extra == "frozen"
+Requires-Dist: psutil==7.2.1; extra == "frozen"
 Requires-Dist: psycopg2-binary==2.9.11; extra == "frozen"
 Requires-Dist: pycparser==2.23; extra == "frozen"
-Requires-Dist: pydantic==2.12.4; extra == "frozen"
+Requires-Dist: pydantic==2.12.5; extra == "frozen"
 Requires-Dist: pydantic-settings==2.12.0; extra == "frozen"
 Requires-Dist: pydantic_core==2.41.5; extra == "frozen"
 Requires-Dist: pyerfa==2.0.1.5; extra == "frozen"
-Requires-Dist: pyparsing==3.2.5; extra == "frozen"
+Requires-Dist: pyparsing==3.3.1; extra == "frozen"
 Requires-Dist: python-daemon==3.1.2; extra == "frozen"
 Requires-Dist: python-dateutil==2.9.0.post0; extra == "frozen"
 Requires-Dist: python-dotenv==1.2.1; extra == "frozen"
@@ -271,42 +273,42 @@ Requires-Dist: requests-toolbelt==1.0.0; extra == "frozen"
 Requires-Dist: rfc3339-validator==0.1.4; extra == "frozen"
 Requires-Dist: rich==13.9.4; extra == "frozen"
 Requires-Dist: rich-argparse==1.7.2; extra == "frozen"
-Requires-Dist: rpds-py==0.28.0; extra == "frozen"
-Requires-Dist: s3transfer==0.14.0; extra == "frozen"
+Requires-Dist: rpds-py==0.30.0; extra == "frozen"
+Requires-Dist: s3transfer==0.16.0; extra == "frozen"
 Requires-Dist: scikit-image==0.25.2; extra == "frozen"
 Requires-Dist: scikit-learn==1.6.1; extra == "frozen"
 Requires-Dist: scipy==1.15.3; extra == "frozen"
 Requires-Dist: semantic-version==2.10.0; extra == "frozen"
 Requires-Dist: setproctitle==1.3.7; extra == "frozen"
 Requires-Dist: six==1.17.0; extra == "frozen"
-Requires-Dist: sniffio==1.3.1; extra == "frozen"
-Requires-Dist: solar-wavelength-calibration==1.0.1; extra == "frozen"
+Requires-Dist: solar-wavelength-calibration==2.0.0; extra == "frozen"
 Requires-Dist: sqids==0.5.1; extra == "frozen"
-Requires-Dist: sqlparse==0.5.3; extra == "frozen"
+Requires-Dist: sqlparse==0.5.5; extra == "frozen"
 Requires-Dist: sunpy==6.1.1; extra == "frozen"
 Requires-Dist: tabulate==0.9.0; extra == "frozen"
 Requires-Dist: talus==1.3.4; extra == "frozen"
 Requires-Dist: tenacity==8.5.0; extra == "frozen"
-Requires-Dist: termcolor==3.2.0; extra == "frozen"
+Requires-Dist: termcolor==3.3.0; extra == "frozen"
 Requires-Dist: text-unidecode==1.3; extra == "frozen"
 Requires-Dist: threadpoolctl==3.6.0; extra == "frozen"
-Requires-Dist: tifffile==2025.10.16; extra == "frozen"
-Requires-Dist: tornado==6.5.2; extra == "frozen"
+Requires-Dist: tifffile==2025.12.20; extra == "frozen"
+Requires-Dist: tornado==6.5.4; extra == "frozen"
 Requires-Dist: tqdm==4.67.1; extra == "frozen"
 Requires-Dist: traitlets==5.14.3; extra == "frozen"
 Requires-Dist: typing-inspection==0.4.2; extra == "frozen"
 Requires-Dist: typing_extensions==4.15.0; extra == "frozen"
-Requires-Dist: tzdata==2025.2; extra == "frozen"
+Requires-Dist: tzdata==2025.3; extra == "frozen"
+Requires-Dist: tzlocal==5.3.1; extra == "frozen"
 Requires-Dist: uc-micro-py==1.0.3; extra == "frozen"
 Requires-Dist: uncertainties==3.2.3; extra == "frozen"
-Requires-Dist: universal_pathlib==0.3.5; extra == "frozen"
-Requires-Dist: urllib3==2.5.0; extra == "frozen"
+Requires-Dist: universal_pathlib==0.3.7; extra == "frozen"
+Requires-Dist: urllib3==2.6.3; extra == "frozen"
 Requires-Dist: vine==5.1.0; extra == "frozen"
-Requires-Dist: voluptuous==0.15.2; extra == "frozen"
+Requires-Dist: voluptuous==0.16.0; extra == "frozen"
 Requires-Dist: wcwidth==0.2.14; extra == "frozen"
 Requires-Dist: wirerope==1.0.0; extra == "frozen"
 Requires-Dist: wrapt==1.17.3; extra == "frozen"
-Requires-Dist: yamale==6.0.0; extra == "frozen"
+Requires-Dist: yamale==6.1.0; extra == "frozen"
 Requires-Dist: yarl==1.22.0; extra == "frozen"
 Requires-Dist: zipp==3.23.0; extra == "frozen"
 
@@ -345,6 +347,10 @@ Environment Variables
      - annotation=str required=False default='unknown-service-version' alias_priority=2 validation_alias='DKIST_SERVICE_VERSION' description='Service version for OpenTelemetry'
    * - NOMAD_ALLOC_ID
      - annotation=str required=False default='unknown-allocation-id' alias_priority=2 validation_alias='NOMAD_ALLOC_ID' description='Nomad allocation ID for OpenTelemetry'
+   * - NOMAD_ALLOC_NAME
+     - annotation=str required=False default='unknown-allocation-name' alias='NOMAD_ALLOC_NAME' alias_priority=2 description='Allocation name for the deployed container the task is running on.'
+   * - NOMAD_GROUP_NAME
+     - annotation=str required=False default='unknown-allocation-group' alias='NOMAD_GROUP_NAME' alias_priority=2 description='Allocation group for the deployed container the task is running on'
    * - OTEL_EXPORTER_OTLP_TRACES_INSECURE
      - annotation=bool required=False default=True description='Use insecure connection for OTLP traces'
    * - OTEL_EXPORTER_OTLP_METRICS_INSECURE
@@ -385,12 +391,12 @@ Environment Variables
      - annotation=Union[dict, NoneType] required=False default=None description='S3 upload configuration for the object store.'
    * - S3_DOWNLOAD_CONFIG
      - annotation=Union[dict, NoneType] required=False default=None description='S3 download configuration for the object store.'
-   * - GLOBUS_TRANSPORT_PARAMS
-     - annotation=dict required=False default_factory=dict description='Globus transfer parameters.'
-   * - GLOBUS_CLIENT_ID
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client ID for inbound/outbound transfers.'
-   * - GLOBUS_CLIENT_SECRET
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client secret for inbound/outbound transfers.'
+   * - GLOBUS_MAX_RETRIES
+     - annotation=int required=False default=5 description='Max retries for transient errors on calls to the globus api.'
+   * - GLOBUS_INBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for inbound transfers.' examples=[[{'client_id': 'id1', 'client_secret': 'secret1'}, {'client_id': 'id2', 'client_secret': 'secret2'}]]
+   * - GLOBUS_OUTBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for outbound transfers.' examples=[[{'client_id': 'id3', 'client_secret': 'secret3'}, {'client_id': 'id4', 'client_secret': 'secret4'}]]
    * - OBJECT_STORE_ENDPOINT
      - annotation=Union[str, NoneType] required=False default=None description='Object store Globus Endpoint ID.'
    * - SCRATCH_ENDPOINT

{dkist_processing_visp-4.0.0 → dkist_processing_visp-5.2.5}/README.rst

@@ -33,6 +33,10 @@ Environment Variables
      - annotation=str required=False default='unknown-service-version' alias_priority=2 validation_alias='DKIST_SERVICE_VERSION' description='Service version for OpenTelemetry'
    * - NOMAD_ALLOC_ID
      - annotation=str required=False default='unknown-allocation-id' alias_priority=2 validation_alias='NOMAD_ALLOC_ID' description='Nomad allocation ID for OpenTelemetry'
+   * - NOMAD_ALLOC_NAME
+     - annotation=str required=False default='unknown-allocation-name' alias='NOMAD_ALLOC_NAME' alias_priority=2 description='Allocation name for the deployed container the task is running on.'
+   * - NOMAD_GROUP_NAME
+     - annotation=str required=False default='unknown-allocation-group' alias='NOMAD_GROUP_NAME' alias_priority=2 description='Allocation group for the deployed container the task is running on'
    * - OTEL_EXPORTER_OTLP_TRACES_INSECURE
      - annotation=bool required=False default=True description='Use insecure connection for OTLP traces'
    * - OTEL_EXPORTER_OTLP_METRICS_INSECURE
@@ -73,12 +77,12 @@ Environment Variables
      - annotation=Union[dict, NoneType] required=False default=None description='S3 upload configuration for the object store.'
    * - S3_DOWNLOAD_CONFIG
      - annotation=Union[dict, NoneType] required=False default=None description='S3 download configuration for the object store.'
-   * - GLOBUS_TRANSPORT_PARAMS
-     - annotation=dict required=False default_factory=dict description='Globus transfer parameters.'
-   * - GLOBUS_CLIENT_ID
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client ID for inbound/outbound transfers.'
-   * - GLOBUS_CLIENT_SECRET
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client secret for inbound/outbound transfers.'
+   * - GLOBUS_MAX_RETRIES
+     - annotation=int required=False default=5 description='Max retries for transient errors on calls to the globus api.'
+   * - GLOBUS_INBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for inbound transfers.' examples=[[{'client_id': 'id1', 'client_secret': 'secret1'}, {'client_id': 'id2', 'client_secret': 'secret2'}]]
+   * - GLOBUS_OUTBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for outbound transfers.' examples=[[{'client_id': 'id3', 'client_secret': 'secret3'}, {'client_id': 'id4', 'client_secret': 'secret4'}]]
    * - OBJECT_STORE_ENDPOINT
      - annotation=Union[str, NoneType] required=False default=None description='Object store Globus Endpoint ID.'
    * - SCRATCH_ENDPOINT

{dkist_processing_visp-4.0.0 → dkist_processing_visp-5.2.5}/SCIENCE_CHANGELOG.rst

@@ -1,3 +1,32 @@
+v5.2.0 (2025-12-12)
+===================
+
+
+
+
+- L1 data now have a correct wavelength solution encoded in their headers. See :doc:`here </wavelength_calibration>`
+    for more information. (`#234 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/234>`__)
+
+
+v5.0.0 (2025-12-02)
+===================
+
+
+
+
+- Major update to the gain algorithm to mitigate polarization artifacts in L1 science frames. This change can be split into
+  three parts. See the `gain correction <https://docs.dkist.nso.edu/projects/visp/en/stable/gain_correction.html>`_ page for more information.
+
+  #. Compute a single gain correction image for each beam. In the past we had computed a separate gain image for each modstate as well, but this was found to couple residual polarization structure into the final science frames.
+
+  #. Stop "refining" (i.e., applying small spectral offsets to) the characteristic solar spectrum on a per-spatial-pixel basis. This was initially done to minimize line residuals in Telluric lines but was found to have a more-negative on polarimetric residuals.
+
+  #. Separate vignetting caused by aperture masks from the solar signal used to remove spectral lines in the final gain image. This is done by fitting a solar atlas and taking the deviation in continuum to be the vignetting signal.
+
+  Computing a single gain per beam will greatly reduce the polarization artifacts in L1 data. Measuring the vignette
+  signal directly will further reduce these artifacts and improve flatness across the array. (`#246 <https://bitbucket.org/dkistdc/dkist-processing-visp/pull-requests/246>`__)
+
+
 v4.0.0 (2025-11-12)
 ===================
 

{dkist_processing_visp-4.0.0 → dkist_processing_visp-5.2.5}/bitbucket-pipelines.yml

@@ -42,6 +42,7 @@ definitions:
         caches:
           - pip
         name: Test
+        size: 2x
         script:
           - pip install -U pip wheel build setuptools_scm setuptools
           - pip install .[test]