dkist-processing-cryonirsp 1.14.4__tar.gz → 1.15.0rc4__tar.gz

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/CHANGELOG.rst

@@ -1,3 +1,63 @@
+v1.14.10 (2026-01-09)
+=====================
+
+Misc
+----
+
+- Update dkist-fits-specifications to add `L1_EXTRA` as a valid value for the `PROCTYPE` header key. (`#233 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/233>`__)
+
+
+v1.14.9 (2026-01-07)
+====================
+
+Misc
+----
+
+- Update dkist-processing-common to add a new constant for the dark number of raw frames per FPA. (`#232 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/232>`__)
+
+
+v1.14.8 (2025-12-22)
+====================
+
+Misc
+----
+
+- Change the default URL of the solar and telluric atlases for unit tests. (`#230 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/230>`__)
+
+
+Bugfixes
+--------
+
+- Update dkist-processing-common to raise an error when movie files are missing. (`#229 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/229>`__)
+
+
+v1.14.7 (2025-12-16)
+====================
+
+Misc
+----
+
+- Update dkist-fits-specifications to enable use of dataset extras schemas. (`#228 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/228>`__)
+
+
+v1.14.6 (2025-12-08)
+====================
+
+Features
+--------
+
+- Store quality data in object store and revise the workflow so that CIAssembleQualityData and SPAssembleQualityData precede the TransferL1Data task. (`#226 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/226>`__)
+
+
+v1.14.5 (2025-12-05)
+====================
+
+Misc
+----
+
+- Update dkist-processing-common to 11.9.0 to take advantage of globus account pools for inbound and outbound transfers. (`#227 <https://bitbucket.org/dkistdc/dkist-processing-cryonirsp/pull-requests/227>`__)
+
+
 v1.14.4 (2025-12-02)
 ====================
 

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: dkist-processing-cryonirsp
-Version: 1.14.4
+Version: 1.15.0rc4
 Summary: Science processing code for the Cryo-NIRSP instrument on DKIST
 Author-email: NSO / AURA <dkistdc@nso.edu>
 License: BSD-3-Clause
@@ -10,19 +10,19 @@ Project-URL: Documentation, https://docs.dkist.nso.edu/projects/cryo-nirsp
 Project-URL: Help, https://nso.atlassian.net/servicedesk/customer/portal/5
 Classifier: Programming Language :: Python
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-Requires-Dist: pathspec==0.12.1; extra == "frozen"
+Requires-Dist: pathspec==1.0.3; extra == "frozen"
 Requires-Dist: pendulum==3.1.0; extra == "frozen"
 Requires-Dist: pika==1.3.2; extra == "frozen"
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 Requires-Dist: pip==25.3; extra == "frozen"
-Requires-Dist: platformdirs==4.5.0; extra == "frozen"
+Requires-Dist: platformdirs==4.5.1; extra == "frozen"
 Requires-Dist: pluggy==1.6.0; extra == "frozen"
 Requires-Dist: pooch==1.8.2; extra == "frozen"
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 Requires-Dist: proglog==0.1.12; extra == "frozen"
-Requires-Dist: prometheus_client==0.23.1; extra == "frozen"
+Requires-Dist: prometheus_client==0.24.1; extra == "frozen"
 Requires-Dist: prompt_toolkit==3.0.52; extra == "frozen"
 Requires-Dist: propcache==0.4.1; extra == "frozen"
-Requires-Dist: protobuf==6.33.1; extra == "frozen"
-Requires-Dist: psutil==7.1.3; extra == "frozen"
+Requires-Dist: protobuf==6.33.4; extra == "frozen"
+Requires-Dist: psutil==7.2.1; extra == "frozen"
 Requires-Dist: psycopg2-binary==2.9.11; extra == "frozen"
 Requires-Dist: pycparser==2.23; extra == "frozen"
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 Requires-Dist: pyerfa==2.0.1.5; extra == "frozen"
-Requires-Dist: pyparsing==3.2.5; extra == "frozen"
+Requires-Dist: pygtrie==2.5.0; extra == "frozen"
+Requires-Dist: pyparsing==3.3.1; extra == "frozen"
 Requires-Dist: python-daemon==3.1.2; extra == "frozen"
 Requires-Dist: python-dateutil==2.9.0.post0; extra == "frozen"
 Requires-Dist: python-dotenv==1.2.1; extra == "frozen"
-Requires-Dist: python-nvd3==0.16.0; extra == "frozen"
+Requires-Dist: python-multipart==0.0.21; extra == "frozen"
 Requires-Dist: python-slugify==8.0.4; extra == "frozen"
 Requires-Dist: pytz==2025.2; extra == "frozen"
 Requires-Dist: redis==6.4.0; extra == "frozen"
 Requires-Dist: referencing==0.37.0; extra == "frozen"
 Requires-Dist: requests==2.32.5; extra == "frozen"
-Requires-Dist: requests-toolbelt==1.0.0; extra == "frozen"
-Requires-Dist: rfc3339-validator==0.1.4; extra == "frozen"
-Requires-Dist: rich==13.9.4; extra == "frozen"
+Requires-Dist: rich==14.2.0; extra == "frozen"
 Requires-Dist: rich-argparse==1.7.2; extra == "frozen"
+Requires-Dist: rich-toolkit==0.17.1; extra == "frozen"
 Requires-Dist: rpds-py==0.30.0; extra == "frozen"
 Requires-Dist: s3transfer==0.16.0; extra == "frozen"
 Requires-Dist: scikit-image==0.25.2; extra == "frozen"
 Requires-Dist: scipy==1.15.3; extra == "frozen"
 Requires-Dist: semantic-version==2.10.0; extra == "frozen"
 Requires-Dist: setproctitle==1.3.7; extra == "frozen"
+Requires-Dist: shellingham==1.5.4; extra == "frozen"
 Requires-Dist: six==1.17.0; extra == "frozen"
+Requires-Dist: sniffio==1.3.1; extra == "frozen"
 Requires-Dist: solar-wavelength-calibration==2.0.0; extra == "frozen"
 Requires-Dist: sqids==0.5.1; extra == "frozen"
-Requires-Dist: sqlparse==0.5.4; extra == "frozen"
+Requires-Dist: sqlparse==0.5.5; extra == "frozen"
+Requires-Dist: starlette==0.48.0; extra == "frozen"
+Requires-Dist: structlog==25.5.0; extra == "frozen"
 Requires-Dist: sunpy==6.1.1; extra == "frozen"
+Requires-Dist: svcs==25.1.0; extra == "frozen"
 Requires-Dist: tabulate==0.9.0; extra == "frozen"
 Requires-Dist: talus==1.3.4; extra == "frozen"
 Requires-Dist: tenacity==8.5.0; extra == "frozen"
-Requires-Dist: termcolor==3.2.0; extra == "frozen"
+Requires-Dist: termcolor==3.3.0; extra == "frozen"
 Requires-Dist: text-unidecode==1.3; extra == "frozen"
-Requires-Dist: tifffile==2025.10.16; extra == "frozen"
-Requires-Dist: tornado==6.5.2; extra == "frozen"
+Requires-Dist: tifffile==2026.1.14; extra == "frozen"
+Requires-Dist: tornado==6.5.4; extra == "frozen"
 Requires-Dist: tqdm==4.67.1; extra == "frozen"
 Requires-Dist: traitlets==5.14.3; extra == "frozen"
+Requires-Dist: typer==0.21.1; extra == "frozen"
 Requires-Dist: typing-inspection==0.4.2; extra == "frozen"
 Requires-Dist: typing_extensions==4.15.0; extra == "frozen"
-Requires-Dist: tzdata==2025.2; extra == "frozen"
+Requires-Dist: tzdata==2025.3; extra == "frozen"
 Requires-Dist: tzlocal==5.3.1; extra == "frozen"
 Requires-Dist: uc-micro-py==1.0.3; extra == "frozen"
-Requires-Dist: uncertainties==3.2.3; extra == "frozen"
-Requires-Dist: universal_pathlib==0.3.6; extra == "frozen"
-Requires-Dist: urllib3==2.5.0; extra == "frozen"
+Requires-Dist: uncertainties==3.2.4; extra == "frozen"
+Requires-Dist: universal_pathlib==0.2.6; extra == "frozen"
+Requires-Dist: urllib3==2.6.3; extra == "frozen"
+Requires-Dist: uuid6==2025.0.1; extra == "frozen"
+Requires-Dist: uvicorn==0.40.0; extra == "frozen"
+Requires-Dist: uvloop==0.22.1; extra == "frozen"
 Requires-Dist: vine==5.1.0; extra == "frozen"
-Requires-Dist: voluptuous==0.15.2; extra == "frozen"
+Requires-Dist: voluptuous==0.16.0; extra == "frozen"
+Requires-Dist: watchfiles==1.1.1; extra == "frozen"
 Requires-Dist: wcwidth==0.2.14; extra == "frozen"
+Requires-Dist: websockets==16.0; extra == "frozen"
 Requires-Dist: wirerope==1.0.0; extra == "frozen"
 Requires-Dist: wrapt==1.17.3; extra == "frozen"
 Requires-Dist: yamale==6.1.0; extra == "frozen"
@@ -346,6 +336,10 @@ Environment Variables
      - annotation=str required=False default='unknown-service-version' alias_priority=2 validation_alias='DKIST_SERVICE_VERSION' description='Service version for OpenTelemetry'
    * - NOMAD_ALLOC_ID
      - annotation=str required=False default='unknown-allocation-id' alias_priority=2 validation_alias='NOMAD_ALLOC_ID' description='Nomad allocation ID for OpenTelemetry'
+   * - NOMAD_ALLOC_NAME
+     - annotation=str required=False default='unknown-allocation-name' alias='NOMAD_ALLOC_NAME' alias_priority=2 description='Allocation name for the deployed container the task is running on.'
+   * - NOMAD_GROUP_NAME
+     - annotation=str required=False default='unknown-allocation-group' alias='NOMAD_GROUP_NAME' alias_priority=2 description='Allocation group for the deployed container the task is running on'
    * - OTEL_EXPORTER_OTLP_TRACES_INSECURE
      - annotation=bool required=False default=True description='Use insecure connection for OTLP traces'
    * - OTEL_EXPORTER_OTLP_METRICS_INSECURE
@@ -370,6 +364,8 @@ Environment Variables
      - annotation=str required=False default='classic' description='Queue type for the interservice-bus.' examples=['quorum', 'classic']
    * - BUILD_VERSION
      - annotation=str required=False default='dev' description='Fallback build version for workflow tasks.'
+   * - MAX_FILE_DESCRIPTORS
+     - annotation=int required=False default=1024 description='Maximum number of file descriptors to allow the process.'
    * - GQL_AUTH_TOKEN
      - annotation=Union[str, NoneType] required=False default='dev' description='The auth token for the metadata-store-api.'
    * - OBJECT_STORE_ACCESS_KEY
@@ -386,12 +382,12 @@ Environment Variables
      - annotation=Union[dict, NoneType] required=False default=None description='S3 upload configuration for the object store.'
    * - S3_DOWNLOAD_CONFIG
      - annotation=Union[dict, NoneType] required=False default=None description='S3 download configuration for the object store.'
-   * - GLOBUS_TRANSPORT_PARAMS
-     - annotation=dict required=False default_factory=dict description='Globus transfer parameters.'
-   * - GLOBUS_CLIENT_ID
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client ID for inbound/outbound transfers.'
-   * - GLOBUS_CLIENT_SECRET
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client secret for inbound/outbound transfers.'
+   * - GLOBUS_MAX_RETRIES
+     - annotation=int required=False default=5 description='Max retries for transient errors on calls to the globus api.'
+   * - GLOBUS_INBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for inbound transfers.' examples=[[{'client_id': 'id1', 'client_secret': 'secret1'}, {'client_id': 'id2', 'client_secret': 'secret2'}]]
+   * - GLOBUS_OUTBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for outbound transfers.' examples=[[{'client_id': 'id3', 'client_secret': 'secret3'}, {'client_id': 'id4', 'client_secret': 'secret4'}]]
    * - OBJECT_STORE_ENDPOINT
      - annotation=Union[str, NoneType] required=False default=None description='Object store Globus Endpoint ID.'
    * - SCRATCH_ENDPOINT

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/README.rst

@@ -33,6 +33,10 @@ Environment Variables
      - annotation=str required=False default='unknown-service-version' alias_priority=2 validation_alias='DKIST_SERVICE_VERSION' description='Service version for OpenTelemetry'
    * - NOMAD_ALLOC_ID
      - annotation=str required=False default='unknown-allocation-id' alias_priority=2 validation_alias='NOMAD_ALLOC_ID' description='Nomad allocation ID for OpenTelemetry'
+   * - NOMAD_ALLOC_NAME
+     - annotation=str required=False default='unknown-allocation-name' alias='NOMAD_ALLOC_NAME' alias_priority=2 description='Allocation name for the deployed container the task is running on.'
+   * - NOMAD_GROUP_NAME
+     - annotation=str required=False default='unknown-allocation-group' alias='NOMAD_GROUP_NAME' alias_priority=2 description='Allocation group for the deployed container the task is running on'
    * - OTEL_EXPORTER_OTLP_TRACES_INSECURE
      - annotation=bool required=False default=True description='Use insecure connection for OTLP traces'
    * - OTEL_EXPORTER_OTLP_METRICS_INSECURE
@@ -57,6 +61,8 @@ Environment Variables
      - annotation=str required=False default='classic' description='Queue type for the interservice-bus.' examples=['quorum', 'classic']
    * - BUILD_VERSION
      - annotation=str required=False default='dev' description='Fallback build version for workflow tasks.'
+   * - MAX_FILE_DESCRIPTORS
+     - annotation=int required=False default=1024 description='Maximum number of file descriptors to allow the process.'
    * - GQL_AUTH_TOKEN
      - annotation=Union[str, NoneType] required=False default='dev' description='The auth token for the metadata-store-api.'
    * - OBJECT_STORE_ACCESS_KEY
@@ -73,12 +79,12 @@ Environment Variables
      - annotation=Union[dict, NoneType] required=False default=None description='S3 upload configuration for the object store.'
    * - S3_DOWNLOAD_CONFIG
      - annotation=Union[dict, NoneType] required=False default=None description='S3 download configuration for the object store.'
-   * - GLOBUS_TRANSPORT_PARAMS
-     - annotation=dict required=False default_factory=dict description='Globus transfer parameters.'
-   * - GLOBUS_CLIENT_ID
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client ID for inbound/outbound transfers.'
-   * - GLOBUS_CLIENT_SECRET
-     - annotation=Union[str, NoneType] required=False default=None description='Globus client secret for inbound/outbound transfers.'
+   * - GLOBUS_MAX_RETRIES
+     - annotation=int required=False default=5 description='Max retries for transient errors on calls to the globus api.'
+   * - GLOBUS_INBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for inbound transfers.' examples=[[{'client_id': 'id1', 'client_secret': 'secret1'}, {'client_id': 'id2', 'client_secret': 'secret2'}]]
+   * - GLOBUS_OUTBOUND_CLIENT_CREDENTIALS
+     - annotation=list[GlobusClientCredential] required=False default_factory=list description='Globus client credentials for outbound transfers.' examples=[[{'client_id': 'id3', 'client_secret': 'secret3'}, {'client_id': 'id4', 'client_secret': 'secret4'}]]
    * - OBJECT_STORE_ENDPOINT
      - annotation=Union[str, NoneType] required=False default=None description='Object store Globus Endpoint ID.'
    * - SCRATCH_ENDPOINT

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/bitbucket-pipelines.yml

@@ -1,5 +1,5 @@
 #Build Configuration for docker deployment to artifactory
-image: python:3.12
+image: python:3.13
 
 definitions:
   services:

dkist_processing_cryonirsp-1.15.0rc4/changelog/234.misc.rst

@@ -0,0 +1 @@
+Upgrade to use Airflow 3 and a minimum python version of 3.13.

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/dkist_processing_cryonirsp/tests/conftest.py

@@ -376,7 +376,7 @@ def cryonirsp_testing_parameters_factory(
         cryonirsp_pixel_pitch_micron: float = 18.0
         cryonirsp_wavecal_atlas_download_config: dict[str, str] = field(
             default_factory=lambda: {
-                "base_url": "doi:10.5281/zenodo.14646787/",
+                "base_url": "https://g-a36282.cd214.a567.data.globus.org/atlas/",
                 "telluric_reference_atlas_file_name": "telluric_reference_atlas.npy",
                 "telluric_reference_atlas_hash_id": "md5:8db5e12508b293bca3495d81a0747447",
                 "solar_reference_atlas_file_name": "solar_reference_atlas.npy",

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/dkist_processing_cryonirsp/tests/test_assemble_qualilty.py

@@ -474,7 +474,11 @@ def test_assemble_quality_data(
     # Then
     # each quality_data file is a list - this will combine the elements of multiple lists into a single list
     quality_data = list(
-        chain.from_iterable(task.read(tags=CryonirspTag.quality_data(), decoder=json_decoder))
+        chain.from_iterable(
+            task.read(
+                tags=[CryonirspTag.output(), CryonirspTag.quality_data()], decoder=json_decoder
+            )
+        )
     )
     # 19 with polcal
     assert len(quality_data) == 19

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/dkist_processing_cryonirsp/tests/test_trial_create_quality_report.py

@@ -49,7 +49,7 @@ def create_trial_quality_report_task(
         )
         task.write(
             quality_data_warning_only,
-            tags=CryonirspTag.quality_data(),
+            tags=[CryonirspTag.output(), CryonirspTag.quality_data()],
             encoder=quality_data_encoder,
             relative_path=f"{task.constants.dataset_id}_quality_data.json",
         )

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/dkist_processing_cryonirsp/workflows/ci_l0_processing.py

@@ -67,9 +67,11 @@ l0_pipeline.add_node(
 # Output flow
 l0_pipeline.add_node(
     task=SubmitDatasetMetadata,
-    upstreams=[CIWriteL1Frame, CIAssembleQualityData, AssembleCryonirspMovie],
+    upstreams=[CIWriteL1Frame, AssembleCryonirspMovie],
+)
+l0_pipeline.add_node(
+    task=TransferL1Data, upstreams=[CIWriteL1Frame, AssembleCryonirspMovie, CIAssembleQualityData]
 )
-l0_pipeline.add_node(task=TransferL1Data, upstreams=[CIWriteL1Frame, AssembleCryonirspMovie])
 l0_pipeline.add_node(
     task=PublishCatalogAndQualityMessages, upstreams=[SubmitDatasetMetadata, TransferL1Data]
 )

{dkist_processing_cryonirsp-1.14.4 → dkist_processing_cryonirsp-1.15.0rc4}/dkist_processing_cryonirsp/workflows/sp_l0_processing.py

@@ -75,9 +75,11 @@ l0_pipeline.add_node(
 # Output flow
 l0_pipeline.add_node(
     task=SubmitDatasetMetadata,
-    upstreams=[SPWriteL1Frame, SPAssembleQualityData, AssembleCryonirspMovie],
+    upstreams=[SPWriteL1Frame, AssembleCryonirspMovie],
+)
+l0_pipeline.add_node(
+    task=TransferL1Data, upstreams=[SPWriteL1Frame, AssembleCryonirspMovie, SPAssembleQualityData]
 )
-l0_pipeline.add_node(task=TransferL1Data, upstreams=[SPWriteL1Frame, AssembleCryonirspMovie])
 l0_pipeline.add_node(
     task=PublishCatalogAndQualityMessages, upstreams=[SubmitDatasetMetadata, TransferL1Data]
 )