discontinuum 1.0.2__tar.gz → 1.0.3__tar.gz

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Files changed (62) hide show
  1. {discontinuum-1.0.2 → discontinuum-1.0.3}/PKG-INFO +1 -1
  2. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/_version.py +2 -2
  3. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum.egg-info/PKG-INFO +1 -1
  4. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/models/gpytorch.py +4 -3
  5. {discontinuum-1.0.2 → discontinuum-1.0.3}/.github/workflows/deploy-docs.yml +0 -0
  6. {discontinuum-1.0.2 → discontinuum-1.0.3}/.github/workflows/python-package.yml +0 -0
  7. {discontinuum-1.0.2 → discontinuum-1.0.3}/.github/workflows/python-publish.yml +0 -0
  8. {discontinuum-1.0.2 → discontinuum-1.0.3}/.gitignore +0 -0
  9. {discontinuum-1.0.2 → discontinuum-1.0.3}/DISCLAIMER.md +0 -0
  10. {discontinuum-1.0.2 → discontinuum-1.0.3}/LICENSE.md +0 -0
  11. {discontinuum-1.0.2 → discontinuum-1.0.3}/README.md +0 -0
  12. {discontinuum-1.0.2 → discontinuum-1.0.3}/code.json +0 -0
  13. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/Makefile +0 -0
  14. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/assets/illinois-river-nitrate.png +0 -0
  15. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/make.bat +0 -0
  16. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/source/api_reference.rst +0 -0
  17. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/source/conf.py +0 -0
  18. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/source/getting_started.md +0 -0
  19. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/source/index.md +0 -0
  20. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/source/notebooks/loadest-gp-demo.ipynb +0 -0
  21. {discontinuum-1.0.2 → discontinuum-1.0.3}/docs/source/notebooks/rating-gp-demo.ipynb +0 -0
  22. {discontinuum-1.0.2 → discontinuum-1.0.3}/examples/nwqn-loadest-example/Dockerfile_discontinuum +0 -0
  23. {discontinuum-1.0.2 → discontinuum-1.0.3}/examples/nwqn-loadest-example/README.md +0 -0
  24. {discontinuum-1.0.2 → discontinuum-1.0.3}/examples/nwqn-loadest-example/lithops.yaml +0 -0
  25. {discontinuum-1.0.2 → discontinuum-1.0.3}/examples/nwqn-loadest-example/nwqn-loadest-example.py +0 -0
  26. {discontinuum-1.0.2 → discontinuum-1.0.3}/examples/nwqn-loadest-example/requirements.txt +0 -0
  27. {discontinuum-1.0.2 → discontinuum-1.0.3}/pyproject.toml +0 -0
  28. {discontinuum-1.0.2 → discontinuum-1.0.3}/setup.cfg +0 -0
  29. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/__init__.py +0 -0
  30. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/data_manager.py +0 -0
  31. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/engines/__init__.py +0 -0
  32. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/engines/base.py +0 -0
  33. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/engines/gpytorch.py +0 -0
  34. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/engines/pymc.py +0 -0
  35. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/pipeline.py +0 -0
  36. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/plot.py +0 -0
  37. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/providers/__init__.py +0 -0
  38. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/providers/base.py +0 -0
  39. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/tests/test_pipeline.py +0 -0
  40. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/utils.py +0 -0
  41. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum.egg-info/SOURCES.txt +0 -0
  42. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum.egg-info/dependency_links.txt +0 -0
  43. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum.egg-info/requires.txt +0 -0
  44. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum.egg-info/top_level.txt +0 -0
  45. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/__init__.py +0 -0
  46. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/models/__init__.py +0 -0
  47. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/models/base.py +0 -0
  48. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/models/gpytorch.py +0 -0
  49. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/models/pymc.py +0 -0
  50. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/plot.py +0 -0
  51. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/providers/__init__.py +0 -0
  52. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/providers/usgs.py +0 -0
  53. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/loadest_gp/utils.py +0 -0
  54. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/models/__init__.py +0 -0
  55. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/models/base.py +0 -0
  56. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/models/kernels.py +0 -0
  57. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/pipeline.py +0 -0
  58. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/plot.py +0 -0
  59. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/providers/__init__.py +0 -0
  60. {discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/providers/usgs.py +0 -0
  61. {discontinuum-1.0.2 → discontinuum-1.0.3}/tests/test_loadest_gp.py +0 -0
  62. {discontinuum-1.0.2 → discontinuum-1.0.3}/tests/test_rating_gp.py +0 -0
{discontinuum-1.0.2 → discontinuum-1.0.3}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: discontinuum
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- Version: 1.0.2
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+ Version: 1.0.3
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  Summary: Estimate discontinuous timeseries from continuous covariates.
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  Maintainer-email: Timothy Hodson <thodson@usgs.gov>
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  License: License
{discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum/_version.py RENAMED
@@ -17,5 +17,5 @@ __version__: str
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  __version_tuple__: VERSION_TUPLE
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  version_tuple: VERSION_TUPLE
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- __version__ = version = '1.0.2'
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- __version_tuple__ = version_tuple = (1, 0, 2)
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+ __version__ = version = '1.0.3'
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+ __version_tuple__ = version_tuple = (1, 0, 3)
{discontinuum-1.0.2 → discontinuum-1.0.3}/src/discontinuum.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: discontinuum
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- Version: 1.0.2
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+ Version: 1.0.3
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  Summary: Estimate discontinuous timeseries from continuous covariates.
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  Maintainer-email: Timothy Hodson <thodson@usgs.gov>
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  License: License
{discontinuum-1.0.2 → discontinuum-1.0.3}/src/rating_gp/models/gpytorch.py RENAMED
@@ -71,7 +71,8 @@ class RatingGPMarginalGPyTorch(
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  # noise, *and* you did not specify noise. This is treated as a no-op."
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  self.likelihood = gpytorch.likelihoods.FixedNoiseGaussianLikelihood(
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  noise=noise,
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- learn_additional_noise=False,
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+ learn_additional_noise=True,
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+ noise_prior=gpytorch.priors.HalfNormalPrior(scale=0.01),
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  )
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  model = ExactGPModel(X, y, self.likelihood)
@@ -110,8 +111,8 @@ class ExactGPModel(gpytorch.models.ExactGP):
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  # q * time
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  self.covar_module = (
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  (self.cov_stage()
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- * self.cov_time(ls_prior=GammaPrior(concentration=10, rate=5)))
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- + (self.cov_stage()
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+ * self.cov_time(ls_prior=GammaPrior(concentration=1, rate=1)))
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+ + (self.cov_stage(ls_prior=GammaPrior(concentration=1, rate=2))
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  * self.cov_time(ls_prior=GammaPrior(concentration=2, rate=5))
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  * SigmoidKernel(
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  active_dims=self.stage_dim,
{discontinuum-1.0.2 → discontinuum-1.0.3}/.gitignore RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/DISCLAIMER.md RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/LICENSE.md RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/README.md RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/code.json RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/docs/Makefile RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/docs/make.bat RENAMED
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{discontinuum-1.0.2 → discontinuum-1.0.3}/setup.cfg RENAMED
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