diffcb 0.1.3__tar.gz → 0.1.5__tar.gz

diffcb-0.1.5/LICENSE

@@ -0,0 +1,186 @@
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+   Copyright 2026 Ruiyu Zhang
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+   Licensed under the Apache License, Version 2.0 (the "License");
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diffcb-0.1.5/PKG-INFO

@@ -0,0 +1,317 @@
+Metadata-Version: 2.4
+Name: diffcb
+Version: 0.1.5
+Summary: Differentiable Critical Bandwidth: Silverman's modality test as a differentiable PyTorch layer with IFT backward pass.
+Project-URL: Homepage, https://github.com/ryZhangHason/differentiable-critical-bandwidth
+Project-URL: Repository, https://github.com/ryZhangHason/differentiable-critical-bandwidth
+Project-URL: Documentation, https://github.com/ryZhangHason/differentiable-critical-bandwidth#readme
+Project-URL: Bug Tracker, https://github.com/ryZhangHason/differentiable-critical-bandwidth/issues
+Author-email: Ruiyu Zhang <dhhhason@gmail.com>
+License:                                  Apache License
+                                   Version 2.0, January 2004
+                                http://www.apache.org/licenses/
+        
+           TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+        
+           1. Definitions.
+        
+              "License" shall mean the terms and conditions for use, reproduction,
+              and distribution as defined by Sections 1 through 9 of this document.
+        
+              "Licensor" shall mean the copyright owner or entity authorized by
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+        
+              "Legal Entity" shall mean the union of the acting entity and all
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+              "control" means (i) the power, direct or indirect, to cause the
+              direction or management of such entity, whether by contract or
+              otherwise, or (ii) ownership of fifty percent (50%) or more of the
+              outstanding shares, or (iii) beneficial ownership of such entity.
+        
+              "You" (or "Your") shall mean an individual or Legal Entity
+              exercising permissions granted by this License.
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+              "Source" form shall mean the preferred form for making modifications,
+              including but not limited to software source code, documentation
+              source, and configuration files.
+        
+              "Object" form shall mean any form resulting from mechanical
+              transformation or translation of a Source form, including but
+              not limited to compiled object code, generated documentation,
+              and conversions to other media types.
+        
+              "Work" shall mean the work of authorship made available under
+              the License, as indicated by a copyright notice that is included in
+              or attached to the work (an example is provided in the Appendix below).
+        
+              "Derivative Works" shall mean any work, whether in Source or Object
+              form, that is based on (or derived from) the Work and for which the
+              editorial revisions, annotations, elaborations, or other modifications
+              represent, as a whole, an original work of authorship. For the purposes
+              of this License, Derivative Works shall not include works that remain
+              separable from, or merely link (or bind by name) to the interfaces of,
+              the Work and Derivative Works thereof.
+        
+              "Contribution" shall mean, as submitted to the Licensor for inclusion
+              in the Work by the copyright owner or by an individual or Legal Entity
+              authorized to submit on behalf of the copyright owner. For the purposes
+              of this definition, "submitted" means any form of electronic, verbal,
+              or written communication sent to the Licensor or its representatives,
+              including but not limited to communication on electronic mailing lists,
+              source code control systems, and issue tracking systems that are managed
+              by, or on behalf of, the Licensor for the purpose of discussing and
+              improving the Work, but excluding communication that is conspicuously
+              marked or designated in writing by the copyright owner as "Not a
+              Contribution."
+        
+              "Contributor" shall mean Licensor and any Legal Entity on behalf of
+              whom a Contribution has been received by the Licensor and included
+              within the Work.
+        
+           2. Grant of Copyright License. Subject to the terms and conditions of
+              this License, each Contributor hereby grants to You a perpetual,
+              worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+              copyright license to reproduce, prepare Derivative Works of,
+              publicly display, publicly perform, sublicense, and distribute the
+              Work and such Derivative Works in Source or Object form.
+        
+           3. Grant of Patent License. Subject to the terms and conditions of
+              this License, each Contributor hereby grants to You a perpetual,
+              worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+              (except as stated in this section) patent license to make, have made,
+              use, offer to sell, sell, import, and otherwise transfer the Work,
+              where such license applies only to those patent claims licensable
+              by such Contributor that are necessarily infringed by their
+              Contribution(s) alone or by combination of their Contribution(s)
+              with the Work to which such Contribution(s) was submitted. If You
+              institute patent litigation against any entity (including a cross-claim
+              or counterclaim in a lawsuit) alleging that the Work or any
+              Contribution embodied within the Work constitutes direct or
+              contributory patent infringement, then any patent licenses granted
+              to You under this License for that Work shall terminate as of the
+              date such litigation is filed.
+        
+           4. Redistribution. You may reproduce and distribute copies of the
+              Work or Derivative Works thereof in any medium, with or without
+              modifications, and in Source or Object form, provided that You
+              meet the following conditions:
+        
+              (a) You must give any other recipients of the Work or Derivative
+                  Works a copy of this License; and
+        
+              (b) You must cause any modified files to carry prominent notices
+                  stating that You changed the files; and
+        
+              (c) You must retain, in the Source form of any Derivative Works
+                  that You distribute, all copyright, patent, trademark, and
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+                  excluding those notices that do not pertain to any part of
+                  the Derivative Works; and
+        
+              (d) If the Work includes a "NOTICE" text file as part of its
+                  distribution, You must include a readable copy of the
+                  attribution notices contained within such NOTICE file, in
+                  at least one of the following places: within a NOTICE text
+                  file distributed as part of the Derivative Works; within
+                  the Source form or documentation, if provided along with the
+                  Derivative Works; or, within a display generated by the
+                  Derivative Works, if and wherever such third-party notices
+                  normally appear. The contents of the NOTICE file are for
+                  informational purposes only and do not modify the License.
+                  You may add Your own attribution notices within Derivative
+                  Works that You distribute, alongside or as an addendum to
+                  the NOTICE text from the Work, provided that such additional
+                  attribution notices cannot be construed as modifying the
+                  License.
+        
+              You may add Your own license statement for Your modifications and
+              may provide additional grant of rights to use, copy, modify, merge,
+              publish, distribute, sublicense, and/or sell copies of Your
+              modifications, and to permit persons to whom Your modifications are
+              furnished to do so, as long as such licensing does not conflict with
+              the terms of this License.
+        
+           5. Submission of Contributions. Unless You explicitly state otherwise,
+              any Contribution intentionally submitted for inclusion in the Work
+              by You to the Licensor shall be under the terms and conditions of
+              this License, without any additional terms or conditions.
+              Notwithstanding the above, nothing herein shall supersede or modify
+              the terms of any separate license agreement you may have executed
+              with Licensor regarding such Contributions.
+        
+           6. Trademarks. This License does not grant permission to use the trade
+              names, trademarks, service marks, or product names of the Licensor,
+              except as required for reasonable and customary use in describing the
+              origin of the Work and reproducing the content of the NOTICE file.
+        
+           7. Disclaimer of Warranty. Unless required by applicable law or
+              agreed to in writing, Licensor provides the Work (and each
+              Contributor provides its Contributions) on an "AS IS" BASIS,
+              WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
+              implied, including, without limitation, any warranties or conditions
+              of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
+              PARTICULAR PURPOSE. You are solely responsible for determining the
+              appropriateness of using or reproducing the Work and assume any
+              risks associated with Your exercise of permissions under this License.
+        
+           8. Limitation of Liability. In no event and under no legal theory,
+              whether in tort (including negligence), contract, or otherwise,
+              unless required by applicable law (such as deliberate and grossly
+              negligent acts) or agreed to in writing, shall any Contributor be
+              liable to You for damages, including any direct, indirect, special,
+              incidental, or exemplary damages of any character arising as a
+              result of this License or out of the use or inability to use the
+              Work (including but not limited to damages for loss of goodwill,
+              work stoppage, computer failure or malfunction, or all other
+              commercial damages or losses), even if such Contributor has been
+              advised of the possibility of such damages.
+        
+           9. Accepting Warranty or Liability. While redistributing the Work or
+              Derivative Works thereof, You may choose to offer, and charge a fee
+              for, acceptance of support, warranty, indemnity, or other liability
+              obligations and/or rights consistent with this License. However, in
+              accepting such obligations, You may offer such obligations only on
+              Your own behalf and on Your sole responsibility, not on behalf of
+              any other Contributor, and only if You agree to indemnify, defend,
+              and hold each Contributor harmless for any liability incurred by,
+              or claims asserted against, such Contributor by reason of your
+              accepting any such warranty or additional liability.
+        
+           END OF TERMS AND CONDITIONS
+        
+           Copyright 2026 Ruiyu Zhang
+        
+           Licensed under the Apache License, Version 2.0 (the "License");
+           you may not use this file except in compliance with the License.
+           You may obtain a copy of the License at
+        
+               http://www.apache.org/licenses/LICENSE-2.0
+        
+           Unless required by applicable law or agreed to in writing, software
+           distributed under the License is distributed on an "AS IS" BASIS,
+           WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+           See the License for the specific language governing permissions and
+           limitations under the License.
+License-File: LICENSE
+Keywords: PyTorch,anomaly detection,critical bandwidth,differentiable programming,generative models,kernel density estimation,mode counting,nonparametric statistics
+Classifier: Development Status :: 3 - Alpha
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
+Classifier: Topic :: Scientific/Engineering :: Mathematics
+Requires-Python: >=3.9
+Requires-Dist: matplotlib>=3.7.0
+Requires-Dist: numpy>=1.24.0
+Requires-Dist: scikit-learn>=1.3.0
+Requires-Dist: scipy>=1.10.0
+Requires-Dist: torch>=2.0.0
+Provides-Extra: dev
+Requires-Dist: black>=23.0.0; extra == 'dev'
+Requires-Dist: pytest-cov>=4.1.0; extra == 'dev'
+Requires-Dist: pytest>=7.4.0; extra == 'dev'
+Requires-Dist: ruff>=0.1.0; extra == 'dev'
+Provides-Extra: notebooks
+Requires-Dist: ipywidgets>=8.0.0; extra == 'notebooks'
+Requires-Dist: jupyter>=1.0.0; extra == 'notebooks'
+Description-Content-Type: text/markdown
+
+# DCB — Differentiable Critical Bandwidth
+
+[![PyPI](https://img.shields.io/pypi/v/diffcb.svg)](https://pypi.org/project/diffcb/)
+[![License: Apache 2.0](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](LICENSE)
+[![Python 3.9+](https://img.shields.io/badge/python-3.9+-blue.svg)](https://www.python.org/)
+
+A PyTorch package that makes **Silverman's critical bandwidth test (1981)** fully differentiable, enabling end-to-end gradient-based optimization over the modal structure of continuous distributions.
+
+## Overview
+
+The critical bandwidth `h_crit` is the minimum KDE bandwidth at which a distribution appears to have at most `m` modes — a classical nonparametric statistic for modality testing. DCB replaces every non-differentiable operation in its computation with a smooth surrogate, then uses the **Implicit Function Theorem** to compute exact gradients through the root-finding step at O(1) memory cost.
+
+```python
+import torch
+from dcb import DCBLayer
+
+X = torch.randn(1000, requires_grad=True)   # 1D samples
+layer = DCBLayer(target_modes=1)
+h_crit = layer(X)                           # differentiable scalar
+h_crit.backward()                           # exact IFT gradients
+```
+
+## Installation
+
+```bash
+pip install diffcb
+```
+
+Or from source:
+
+```bash
+git clone https://github.com/ryZhangHason/differentiable-critical-bandwidth
+cd differentiable-critical-bandwidth
+pip install -e ".[dev]"
+```
+
+## Accuracy vs R's `bw.crit`
+
+DCB is validated against R's `multimode::bw.crit(data, mod0=1)` — the standard reference implementation of Hall & York (2001). On **identical data**:
+
+| n | DCB vs R (same sample) | DCB vs R (independent samples) |
+|---|---|---|
+| 100K | **0.004%** | ~0.5% (MC noise from independent RNG) |
+| 1M | **0.005%** | ~0.2% |
+| 10M | **0.004%** | ~0.1% |
+
+The independent-sample figures reflect natural sampling variability (two unbiased estimators drawing different data), not algorithmic error. On identical data, DCB agrees with R to within **0.005%** at all tested n. DCB is 43× faster than R at n=100M (1.1 s vs 50 s) and handles n=2B in 24 s while R OOMs.
+
+## Key Parameters
+
+```python
+DCBLayer(
+    target_modes=1,       # target number of modes
+    G=512,                # IFT evaluation grid points
+    use_fft=True,         # FFT forward (default); eliminates subsampling bias for n>50K
+    max_n_exact=1_000_000,# sketch to sketch_size when n exceeds this (None = always exact)
+    sketch_size=500_000,  # sketch target; 500K matches full-n accuracy (O(n^{-2/9}) rate)
+    safe_backward=False,  # clamp IFT denominator near bifurcations
+)
+```
+
+## Confirmed Experimental Results
+
+All GPU results produced on Kaggle (T4 / P100) — see `experiments/` and `outputs/`.
+
+| Experiment | Result | Criterion |
+|---|---|---|
+| **Accuracy vs R (same data, n=100K)** | **0.004%** | < 0.01% ✓ |
+| **Validation (m≥2, Marron-Wand)** | R²=0.91, MAE=0.07, ρ=0.89 | R²≥0.85 ✓ |
+| **Speedup vs scipy (CUDA T4, n=8192)** | **10.5×** | ≥3× ✓ |
+| **GAN mode preservation** | h_crit=1.232 >> 0.3 | h_crit>0.3 ✓ |
+| **Anomaly AUC (KDDCup99)** | DCB=**0.9982** vs IF=0.9867 | DCB≥IF ✓ |
+
+## Repository Structure
+
+```
+dcb/            Core PyTorch package
+  layer.py        DCBLayer nn.Module + DCBFunction autograd
+  solver.py       IFT root-finder and backward pass
+  fft_kde.py      FFT-based mode counter (MPS-safe, float64, G=16384)
+  kde.py          Direct KDE derivatives (small-n path)
+  utils.py        Grid, Silverman bandwidth, sg() stabilizer
+experiments/    Reproduction scripts for all paper figures and tables
+  phase1_*.py     Validation, speedup, ablation (Figures 1–2, S1–S2)
+  phase2_gan.py   GAN mode-collapse prevention (Figure 3)
+  phase3_anomaly.py  Anomaly detection (Table 2, Figure 5)
+  round20_*.py    Large-n R comparison and streaming benchmarks
+  round21_*.py    Accuracy improvement experiments
+tests/          Unit tests (pytest, 45 passed, 1 xfailed)
+outputs/        All generated figures and tables (PDFs, PNGs, CSVs)
+```
+
+## License
+
+Apache 2.0 — see [LICENSE](LICENSE).

{diffcb-0.1.3 → diffcb-0.1.5}/README.md

@@ -1,7 +1,7 @@
 # DCB — Differentiable Critical Bandwidth
 
 [![PyPI](https://img.shields.io/pypi/v/diffcb.svg)](https://pypi.org/project/diffcb/)
-[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](LICENSE)
+[![License: Apache 2.0](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](LICENSE)
 [![Python 3.9+](https://img.shields.io/badge/python-3.9+-blue.svg)](https://www.python.org/)
 
 A PyTorch package that makes **Silverman's critical bandwidth test (1981)** fully differentiable, enabling end-to-end gradient-based optimization over the modal structure of continuous distributions.
@@ -71,18 +71,6 @@ All GPU results produced on Kaggle (T4 / P100) — see `experiments/` and `outpu
 | **GAN mode preservation** | h_crit=1.232 >> 0.3 | h_crit>0.3 ✓ |
 | **Anomaly AUC (KDDCup99)** | DCB=**0.9982** vs IF=0.9867 | DCB≥IF ✓ |
 
-## Changelog
-
-### v0.1.1 (2026-05-29)
-- **MPS fix:** `torch.histc` on MPS allocated an n×bins intermediate (OOM at n≥5M). Replaced with `bucketize+bincount` on CPU — MPS-safe and numerically identical.
-- **Sketch API:** `DCBLayer(max_n_exact=1_000_000, sketch_size=500_000)` — silently sketches to 500K when n exceeds threshold. Justified by O(n⁻²/⁹) convergence of h_crit; 500K sketch matches full-n accuracy.
-- **Consistent bisection domain:** Pre-computed domain passed to all `fft_mode_count` calls in a single bisection, eliminating per-step drift.
-- **Bias warning direction:** Corrected "expected upward bias" to "expected downward bias" on legacy `use_fft=False` path.
-- **Test fixes:** Updated 8 pre-existing test failures (tuple unpacking, bounds, deprecation API).
-
-### v0.1.0 (2026-05-28)
-- Initial PyPI release. FFT forward (O(n + G log G)), IFT backward, MPS support.
-
 ## Repository Structure
 
 ```
@@ -102,28 +90,6 @@ tests/          Unit tests (pytest, 45 passed, 1 xfailed)
 outputs/        All generated figures and tables (PDFs, PNGs, CSVs)
 ```
 
-## Reproducing Paper Results
-
-```bash
-# Phase 1: validation, speedup, ablation
-python experiments/phase1_validation.py
-python experiments/phase1_speedup.py
-
-# Phase 2: GAN mode collapse experiment
-python experiments/phase2_gan.py
-
-# Phase 3: anomaly detection benchmark
-python experiments/phase3_anomaly.py
-```
-
-For GPU runs use the Kaggle kernels:
-- Phase 1–2: `hsingle/dcb-full-experiments`
-- Phase 3: `hsingle/dcb-phase-3-anomaly-detection`
-
-## Paper
-
-> Ruiyu Zhang. "Differentiable Critical Bandwidth: Making Silverman's Modality Test End-to-End Trainable." *Journal of Machine Learning Research*, 2026 (in preparation).
-
 ## License
 
-MIT — see [LICENSE](LICENSE).
+Apache 2.0 — see [LICENSE](LICENSE).

{diffcb-0.1.3 → diffcb-0.1.5}/dcb/__init__.py

@@ -19,4 +19,4 @@ __all__ = [
     "DCBLayer", "DifferentiableCriticalBandwidth",
     "anneal_eps_tau", "soft_mode_count_cross", "soft_mode_count",
 ]
-__version__ = "0.1.3"
+__version__ = "0.1.5"