diffcb 0.1.0__tar.gz → 0.1.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {diffcb-0.1.0 → diffcb-0.1.1}/PKG-INFO +5 -4
- {diffcb-0.1.0 → diffcb-0.1.1}/README.md +4 -3
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/__init__.py +1 -1
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/fft_kde.py +24 -8
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/layer.py +27 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/solver.py +12 -7
- {diffcb-0.1.0 → diffcb-0.1.1}/pyproject.toml +1 -1
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_layer.py +10 -1
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_r18c_deprecation_warn.py +19 -20
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_solver.py +9 -9
- {diffcb-0.1.0 → diffcb-0.1.1}/.gitignore +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/.zenodo.json +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/LICENSE +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/diagnostics.py +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/kde.py +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/dcb/utils.py +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/notebooks/.gitkeep +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_kde.py +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_r18c_denom_audit.py +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_r19_default_fft.py +0 -0
- {diffcb-0.1.0 → diffcb-0.1.1}/tests/test_r19_diagnostics.py +0 -0
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Metadata-Version: 2.4
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Name: diffcb
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Version: 0.1.
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Version: 0.1.1
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Summary: Differentiable Critical Bandwidth: Silverman's modality test as a differentiable PyTorch layer with IFT backward pass.
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Project-URL: Homepage, https://github.com/ryZhangHason/differentiable-critical-bandwidth
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Project-URL: Repository, https://github.com/ryZhangHason/differentiable-critical-bandwidth
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@@ -57,6 +57,7 @@ Description-Content-Type: text/markdown
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# DCB — Differentiable Critical Bandwidth
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[](https://pypi.org/project/diffcb/)
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[](LICENSE)
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[](https://www.python.org/)
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## Installation
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```bash
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pip install
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pip install diffcb
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```
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Or from source:
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```bash
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git clone https://github.com/ryZhangHason/
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cd
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git clone https://github.com/ryZhangHason/differentiable-critical-bandwidth
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cd differentiable-critical-bandwidth
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pip install -e ".[dev]"
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```
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# DCB — Differentiable Critical Bandwidth
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[](https://pypi.org/project/diffcb/)
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[](LICENSE)
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[](https://www.python.org/)
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## Installation
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```bash
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pip install
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pip install diffcb
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```
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Or from source:
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```bash
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git clone https://github.com/ryZhangHason/
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cd
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git clone https://github.com/ryZhangHason/differentiable-critical-bandwidth
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cd differentiable-critical-bandwidth
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pip install -e ".[dev]"
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```
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@@ -24,6 +24,7 @@ def fft_mode_count(
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h: float,
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G: int = 4096,
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pad_factor: int = 4,
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domain: tuple[float, float] | None = None,
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) -> int:
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"""Count KDE modes via FFT convolution — O(n + G log G), no subsampling.
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pad_factor : int
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Zero-padding multiplier (default 4). Mandatory ≥ 2 for circular-wrap
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correctness; 4 is recommended at the largest h encountered.
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domain : (lo, hi) or None
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If provided, use this as the histogram domain instead of computing
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X.min() - 3σ … X.max() + 3σ. Allows the caller to align the domain
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with the bisection bracket (e.g., X.min() - 2*h_hi … X.max() + 2*h_hi)
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so every fft_mode_count call in a bisection loop uses an identical grid.
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Returns
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-------
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Number of KDE modes (downward zero-crossings of f').
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"""
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with torch.no_grad():
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if domain is not None:
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lo, hi = domain
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else:
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# Domain: extend 3σ beyond data range to avoid boundary effects
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sigma = X.std().item()
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if sigma == 0.0:
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sigma = 1.0 # degenerate case: all points identical
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lo = X.min().item() - 3 * sigma
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hi = X.max().item() + 3 * sigma
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data_range = hi - lo
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if data_range == 0.0:
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return 1 # single-point distribution has 1 mode
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# Histogram (O(n)
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# Histogram (O(n)) — MPS-safe via bucketize+bincount on CPU.
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# torch.histc on MPS allocates an n × bins float32 intermediate (PyTorch
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# MPS bug); at n=5M, bins=512 this is ~9.5 GiB → OOM. Moving to CPU for
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# the binning step avoids the intermediate and is numerically identical
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# for data within [lo, hi] (guaranteed by the 3σ domain extension above).
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X_cpu = X.float().cpu()
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edges = torch.linspace(lo, hi, G + 1) # (G+1,) CPU
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bin_idx = torch.bucketize(X_cpu, edges, right=True).clamp(1, G) - 1 # 0-indexed
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counts = torch.bincount(bin_idx, minlength=G).float().to(X.device) # back to device
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# Zero-pad to pad_factor*G (4× mandatory for circular wrap correctness at h_hi)
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N = pad_factor * G
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Default True. Uses FFT-based mode counting (O(n + G log G)) for n > 50K,
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eliminating subsampling bias. Falls back to direct KDE for n ≤ 50K (no
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bias at small n). Set False only for legacy/ablation comparison.
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max_n_exact : int or None
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When n > max_n_exact, draw a uniform random sketch of sketch_size points
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before running the solver. Default 1_000_000. Set None to always use the
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full sample (e.g. for population-limit benchmarking). Justified by the
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O(n^{-2/9}) convergence rate of h_crit: streaming more than ~1M points
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buys < 0.07% systematic improvement on smooth distributions.
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sketch_size : int
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Number of points to sketch when n > max_n_exact. Default 500_000.
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A 500K sketch achieves the same mean accuracy as streaming 100M points
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(validated in Round 20 reservoir experiment).
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Examples
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--------
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adaptive_G: bool = False,
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safe_backward: bool = False,
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use_fft: bool = True,
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max_n_exact: int | None = 1_000_000,
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sketch_size: int = 500_000,
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):
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super().__init__()
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self.target_modes = target_modes
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self.adaptive_G = adaptive_G
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self.safe_backward = safe_backward
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self.use_fft = use_fft
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self.max_n_exact = max_n_exact
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self.sketch_size = sketch_size
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if use_fft and brentq_n_max != 50_000:
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raise TypeError(
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f"brentq_n_max={brentq_n_max} is meaningless when use_fft=True: the FFT path "
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Scalar h_crit, differentiable w.r.t. X.
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"""
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n = X.shape[0]
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if self.max_n_exact is not None and n > self.max_n_exact:
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import warnings
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n_orig = n
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m = min(self.sketch_size, n)
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idx = torch.randperm(n, device=X.device)[:m]
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X = X[idx]
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n = m
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warnings.warn(
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f"DCB: n={n_orig} > max_n_exact={self.max_n_exact}. "
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f"Sketching to {m} points (sketch_size={self.sketch_size}). "
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"Set max_n_exact=None to use the full sample.",
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UserWarning, stacklevel=2,
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)
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G_eff = (
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max(self.G, min(32768, int(self.G * max(1.0, (n / 1000) ** 0.2))))
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if self.adaptive_G else self.G
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warnings.warn(
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f"DCB: n={n} > brentq_n_max={brentq_n_max}. "
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f"h_crit estimated on {brentq_n_max}-point subsample; "
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f"expected
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f"expected downward bias ~{1/bias_factor:.2f}x vs full-data h_crit. "
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"Use use_fft=True to eliminate subsampling bias.",
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UserWarning,
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stacklevel=4,
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)
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if use_fft_effective:
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# Compute adaptive FFT grid size before bisection
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# Compute adaptive FFT grid size before bisection.
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# Use a fixed domain derived from the data range + sigma margin so that
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# every fft_mode_count call in this bisection loop uses an identical
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# histogram grid. Keeping the margin at 3*sigma matches the original
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# default and avoids spurious sign-changes in zero-density regions.
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with torch.no_grad():
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data_range = hi_domain - lo_domain
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G_fft = adaptive_fft_G(data_range, h_hi)
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_domain = (lo_domain, hi_domain)
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with torch.no_grad():
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# Verify bracket using FFT mode count on full X
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count_lo = fft_mode_count(X, h_lo, G=G_fft, domain=_domain)
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if count_lo <= target_modes:
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h_lo_try = h_lo
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break
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h_lo = h_lo_try
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break
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count_hi = fft_mode_count(X, h_hi, G=G_fft, domain=_domain)
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if fft_mode_count(X, h_hi, G=G_fft, domain=_domain) <= target_modes:
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# Standard bisection: 50 iterations → bracket width / 2^50
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mid = (lo + hi) / 2.0
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count = fft_mode_count(X, mid, G=G_fft, domain=_domain)
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hi = mid
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version = "0.1.1"
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description = "Differentiable Critical Bandwidth: Silverman's modality test as a differentiable PyTorch layer with IFT backward pass."
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readme = "README.md"
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assert torch.isfinite(h), f"h_crit is not finite: {h_val}"
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# ---------------------------------------------------------------------------
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@pytest.mark.xfail(
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reason=(
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"IFT gradient is an approximation (soft M̃_cross at h_crit found by hard bisection). "
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"gradcheck at atol=1e-3 is too strict for the soft/hard mismatch at small n. "
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"Qualitative correctness verified in test_ift_gradient_matches_finite_diff."
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),
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)
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def test_dcblayer_gradcheck():
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"""torch.autograd.gradcheck with double precision, eps=1e-4, atol=1e-3.
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19
|
-
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20
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-
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21
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-
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22
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-
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23
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-
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24
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-
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25
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-
msg = str(dep_warns[0].message)
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26
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-
assert "brentq_n_max" in msg, f"Warning message missing 'brentq_n_max': {msg}"
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27
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-
assert "use_fft=True" in msg or "use_fft" in msg, (
|
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28
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-
f"Warning message missing 'use_fft' context: {msg}"
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29
|
-
)
|
|
30
|
-
print("PASS: DeprecationWarning fires when use_fft=True and brentq_n_max set explicitly")
|
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31
|
-
print(f" Message: {msg}")
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16
|
+
"""TypeError raised when use_fft=True and brentq_n_max is explicitly set (R19a upgrade).
|
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17
|
+
|
|
18
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+
R19a promoted the R18c DeprecationWarning to a TypeError: brentq_n_max is meaningless
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19
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+
on the FFT path and now raises immediately to prevent silent misconfiguration.
|
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20
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+
"""
|
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21
|
+
import pytest
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22
|
+
with pytest.raises(TypeError, match="brentq_n_max"):
|
|
23
|
+
DCBLayer(use_fft=True, brentq_n_max=10_000)
|
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24
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+
print("PASS: TypeError raised when use_fft=True and brentq_n_max is set explicitly")
|
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32
25
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|
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33
26
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34
27
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def test_no_deprecation_warn_with_default():
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@@ -45,16 +38,22 @@ def test_no_deprecation_warn_with_default():
|
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|
45
38
|
|
|
46
39
|
|
|
47
40
|
def test_no_deprecation_warn_without_use_fft():
|
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48
|
-
"""
|
|
41
|
+
"""DeprecationWarning fires when use_fft=False and brentq_n_max is non-default (R19a).
|
|
42
|
+
|
|
43
|
+
R19a added a DeprecationWarning on the legacy (use_fft=False) path when brentq_n_max
|
|
44
|
+
is explicitly set, steering users toward use_fft=True.
|
|
45
|
+
"""
|
|
49
46
|
with warnings.catch_warnings(record=True) as w:
|
|
50
47
|
warnings.simplefilter("always")
|
|
51
48
|
layer3 = DCBLayer(use_fft=False, brentq_n_max=10_000)
|
|
52
49
|
dep_warns3 = [x for x in w if issubclass(x.category, DeprecationWarning)]
|
|
53
|
-
assert len(dep_warns3) ==
|
|
54
|
-
f"Expected
|
|
50
|
+
assert len(dep_warns3) == 1, (
|
|
51
|
+
f"Expected exactly 1 DeprecationWarning when use_fft=False + non-default brentq_n_max, "
|
|
55
52
|
f"got {len(dep_warns3)}: {[str(x.message) for x in dep_warns3]}"
|
|
56
53
|
)
|
|
57
|
-
|
|
54
|
+
msg = str(dep_warns3[0].message)
|
|
55
|
+
assert "brentq_n_max" in msg, f"Warning message missing 'brentq_n_max': {msg}"
|
|
56
|
+
print("PASS: DeprecationWarning fires when use_fft=False and brentq_n_max is non-default")
|
|
58
57
|
|
|
59
58
|
|
|
60
59
|
if __name__ == "__main__":
|
|
@@ -42,8 +42,8 @@ def test_find_h_crit_bimodal():
|
|
|
42
42
|
grid = make_grid(X, 128)
|
|
43
43
|
h0 = silverman_bandwidth(X)
|
|
44
44
|
eps, tau = adaptive_eps_tau(X, h0, grid)
|
|
45
|
-
h_crit = find_h_crit(X, grid, eps, tau, target_modes=1)
|
|
46
|
-
assert
|
|
45
|
+
h_crit, _ = find_h_crit(X, grid, eps, tau, target_modes=1)
|
|
46
|
+
assert 0.3 <= h_crit <= 2.0, f"h_crit = {h_crit:.4f}, expected in [0.3, 2.0]"
|
|
47
47
|
|
|
48
48
|
|
|
49
49
|
def test_find_h_crit_unimodal():
|
|
@@ -59,12 +59,12 @@ def test_find_h_crit_unimodal():
|
|
|
59
59
|
grid_uni = make_grid(X_uni, 128)
|
|
60
60
|
h0_uni = silverman_bandwidth(X_uni)
|
|
61
61
|
eps_uni, tau_uni = adaptive_eps_tau(X_uni, h0_uni, grid_uni)
|
|
62
|
-
h_uni = find_h_crit(X_uni, grid_uni, eps_uni, tau_uni, target_modes=1)
|
|
62
|
+
h_uni, _ = find_h_crit(X_uni, grid_uni, eps_uni, tau_uni, target_modes=1)
|
|
63
63
|
|
|
64
64
|
grid_bi = make_grid(X_bi, 128)
|
|
65
65
|
h0_bi = silverman_bandwidth(X_bi)
|
|
66
66
|
eps_bi, tau_bi = adaptive_eps_tau(X_bi, h0_bi, grid_bi)
|
|
67
|
-
h_bi = find_h_crit(X_bi, grid_bi, eps_bi, tau_bi, target_modes=1)
|
|
67
|
+
h_bi, _ = find_h_crit(X_bi, grid_bi, eps_bi, tau_bi, target_modes=1)
|
|
68
68
|
|
|
69
69
|
assert h_uni < h_bi, (
|
|
70
70
|
f"Unimodal h_crit={h_uni:.4f} should be less than bimodal h_crit={h_bi:.4f}"
|
|
@@ -85,8 +85,8 @@ def test_find_h_crit_trimodal():
|
|
|
85
85
|
grid = make_grid(X, 128)
|
|
86
86
|
h0 = silverman_bandwidth(X)
|
|
87
87
|
eps, tau = adaptive_eps_tau(X, h0, grid)
|
|
88
|
-
h_crit_2 = find_h_crit(X, grid, eps, tau, target_modes=2)
|
|
89
|
-
h_crit_1 = find_h_crit(X, grid, eps, tau, target_modes=1)
|
|
88
|
+
h_crit_2, _ = find_h_crit(X, grid, eps, tau, target_modes=2)
|
|
89
|
+
h_crit_1, _ = find_h_crit(X, grid, eps, tau, target_modes=1)
|
|
90
90
|
assert h_crit_2 < h_crit_1, (
|
|
91
91
|
f"Expected h_crit(2 modes)={h_crit_2:.4f} < h_crit(1 mode)={h_crit_1:.4f}"
|
|
92
92
|
)
|
|
@@ -103,7 +103,7 @@ def _bimodal_setup(n=50, seed=42):
|
|
|
103
103
|
grid = make_grid(X, 128)
|
|
104
104
|
h0 = silverman_bandwidth(X)
|
|
105
105
|
eps, tau = adaptive_eps_tau(X, h0, grid)
|
|
106
|
-
h_crit = find_h_crit(X, grid, eps, tau, target_modes=1)
|
|
106
|
+
h_crit, _ = find_h_crit(X, grid, eps, tau, target_modes=1)
|
|
107
107
|
return X, grid, eps, tau, h_crit
|
|
108
108
|
|
|
109
109
|
|
|
@@ -161,8 +161,8 @@ def test_ift_gradient_matches_finite_diff():
|
|
|
161
161
|
h0_minus = silverman_bandwidth(X_minus)
|
|
162
162
|
eps_plus, tau_plus = adaptive_eps_tau(X_plus, h0_plus, grid_plus)
|
|
163
163
|
eps_minus, tau_minus = adaptive_eps_tau(X_minus, h0_minus, grid_minus)
|
|
164
|
-
h_plus = find_h_crit(X_plus, grid_plus, eps_plus, tau_plus, target_modes=1)
|
|
165
|
-
h_minus = find_h_crit(X_minus, grid_minus, eps_minus, tau_minus, target_modes=1)
|
|
164
|
+
h_plus, _ = find_h_crit(X_plus, grid_plus, eps_plus, tau_plus, target_modes=1)
|
|
165
|
+
h_minus, _ = find_h_crit(X_minus, grid_minus, eps_minus, tau_minus, target_modes=1)
|
|
166
166
|
grad_fd[i] = (h_plus - h_minus) / (2 * delta)
|
|
167
167
|
|
|
168
168
|
# Relative error
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|