diffbio 0.1.2__tar.gz → 0.1.3__tar.gz

{diffbio-0.1.2 → diffbio-0.1.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.5
 Name: diffbio
-Version: 0.1.2
+Version: 0.1.3
 Summary: DiffBio: End-to-end differentiable bioinformatics pipelines built on Datarax, Artifex, Opifex, and Calibrax
 Project-URL: Bug Tracker, https://github.com/avitai/DiffBio/issues
 Project-URL: Documentation, https://diffbio.readthedocs.io
@@ -50,7 +50,7 @@ Requires-Dist: beartype>=0.14.1
 Requires-Dist: biopython>=1.81
 Requires-Dist: calibrax>=0.1.5
 Requires-Dist: chex>=0.1.7
-Requires-Dist: datarax>=0.1.6
+Requires-Dist: datarax>=0.1.7
 Requires-Dist: flax>=0.12.9
 Requires-Dist: h5py>=3.7
 Requires-Dist: jax-md>=0.2.27

{diffbio-0.1.2 → diffbio-0.1.3}/pyproject.toml

@@ -37,7 +37,7 @@ classifiers = [
 ]
 dependencies = [
   # Datarax - operator, source, and pipeline contracts
-  "datarax>=0.1.6",
+  "datarax>=0.1.7",
   # Artifex - modeling, modality, and transformer substrate
   "avitai-artifex>=0.1.5",
   # Opifex - scientific ML, operator learning, and advanced optimization
@@ -70,7 +70,7 @@ license = {file = "LICENSE"}
 name = "diffbio"
 readme = "README.md"
 requires-python = ">=3.12,<3.14"
-version = "0.1.2"
+version = "0.1.3"
 
 [project.optional-dependencies]
 all = ["diffbio[benchmark,chem,cuda12,dev,docs,genomics,soft-ops-advanced,soft-ops-ot,test,torch-io]"]

{diffbio-0.1.2 → diffbio-0.1.3}/src/diffbio/sources/anndata_source.py

@@ -34,7 +34,7 @@ from flax import nnx
 
 from datarax.core.config import StructuralConfig
 from datarax.core.data_source import DataSourceModule
-from datarax.sources._eager_source_ops import eager_get_batch, eager_iter, eager_reset
+from datarax.sources import eager_get_batch, eager_iter, eager_reset
 
 from diffbio.sources._anndata_shared import (
     build_anndata_data,